RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 DDAH2O95865 285 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 ZBED1O96006 694 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 TUBBP07437 444 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 ANXA6P08133 673 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 MMP3P08254 477 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 LINC00271P0C7V0 271 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 PATE4P0C8F1 98 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 U2AF1L5P0DN76 240 aaPredicted RBP0.57□□□□□ -2.32
SNORD28-201ENST00000384706 HARSP12081 509 aaKnown RBP0.57□□□□□ -2.32
SNORD28-201ENST00000384706 SRCP12931 536 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 NR1D1P20393 614 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 PRPH2P23942 346 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 MCM3P25205 808 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 KLRK1P26718 216 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 CHRNB4P30926 498 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 AKT1P31749 480 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 SKIV2L2P42285 1042 aaKnown RBP0.57□□□□□ -2.32
SNORD28-201ENST00000384706 FMO5P49326 533 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 CLK1P49759 484 aaKnown RBP0.57□□□□□ -2.32
SNORD28-201ENST00000384706 LUMP51884 338 aaPredicted RBP0.57□□□□□ -2.32
SNORD28-201ENST00000384706 RCAN1P53805 252 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 DVL1P1P54792 670 aaPredicted RBP0.57□□□□□ -2.32
SNORD28-201ENST00000384706 KRTAP10-1P60331 282 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 TUBB4BP68371 445 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 FAM193AP78312 1265 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 IRX1P78414 480 aaPredicted RBP0.57□□□□□ -2.32
SNORD28-201ENST00000384706 ADORA2A-AS1P86434 159 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 U2AF1Q01081 240 aaKnown RBP eCLIP0.57□□□□□ -2.32
SNORD28-201ENST00000384706 CDK18Q07002 472 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 ZNF543Q08ER8 600 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 ZNF155Q12901 538 aaPredicted RBP0.57□□□□□ -2.32
SNORD28-201ENST00000384706 GRIK2Q13002 908 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 PPIGQ13427 754 aaKnown RBP eCLIP0.57□□□□□ -2.32
SNORD28-201ENST00000384706 SEMA5AQ13591 1074 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 ALKBH1Q13686 389 aaKnown RBP0.57□□□□□ -2.32
SNORD28-201ENST00000384706 TNFAIP1Q13829 316 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 CAPSQ13938 189 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 ARL13BQ3SXY8 428 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 TCTE1Q5JU00 501 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 SPINK14Q6IE38 97 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 CYB5RLQ6IPT4 315 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 CXorf57Q6NSI4 855 aaKnown RBP0.57□□□□□ -2.32
SNORD28-201ENST00000384706 RINT1Q6NUQ1 792 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 FBXO38Q6PIJ6 1188 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 KLHL24Q6TFL4 600 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 LCTLQ6UWM7 567 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 KIAA1324Q6UXG2 1013 aaKnown RBP0.57□□□□□ -2.32
SNORD28-201ENST00000384706 CEACAM20Q6UY09 585 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 PATL1Q86TB9 770 aaKnown RBP0.57□□□□□ -2.32
SNORD28-201ENST00000384706 TRIM74Q86UV6 250 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 TRIM73Q86UV7 250 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 TRABD2AQ86V40 505 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 P2RY8Q86VZ1 359 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 MB21D2Q8IYB1 491 aaPredicted RBP0.57□□□□□ -2.32
SNORD28-201ENST00000384706 AADATQ8N5Z0 425 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 ENDOVQ8N8Q3 282 aaKnown RBP0.57□□□□□ -2.32
SNORD28-201ENST00000384706 CNBD1Q8NA66 436 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 SLC24A4Q8NFF2 622 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 OR10V1Q8NGI7 309 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 ZCRB1Q8TBF4 217 aaKnown RBP0.57□□□□□ -2.32
SNORD28-201ENST00000384706 HCAR2Q8TDS4 363 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 CREB3L4Q8TEY5 395 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 TBC1D22AQ8WUA7 517 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 HDAC7Q8WUI4 952 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 WDR60Q8WVS4 1066 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 HMGB4Q8WW32 186 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 LGALS12Q96DT0 336 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 ALG14Q96F25 216 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 TMEM19Q96HH6 336 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 LRFN5Q96NI6 719 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 FSD1Q9BTV5 496 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 MSTO1Q9BUK6 570 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 MECRQ9BV79 373 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 CADM1Q9BY67 442 aaKnown RBP0.57□□□□□ -2.32
SNORD28-201ENST00000384706 TRIM15Q9C019 465 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 BTBD1Q9H0C5 482 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 WDR13Q9H1Z4 485 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 PDZD7Q9H5P4 517 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 ACAD9Q9H845 621 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 EBF2Q9HAK2 575 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 NOX4Q9NPH5 578 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 HELLSQ9NRZ9 838 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 ABCF3Q9NUQ8 709 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 ZNF224Q9NZL3 707 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 RGL1Q9NZL6 768 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 OR6C3Q9NZP0 311 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 MYO1AQ9UBC5 1043 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 SLC9A2Q9UBY0 812 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 SIX4Q9UIU6 781 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 FAF1Q9UNN5 650 aaPredicted RBP0.57□□□□□ -2.32
SNORD28-201ENST00000384706 DTNAQ9Y4J8 743 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 KLF2Q9Y5W3 355 aaPredicted RBP0.57□□□□□ -2.32
SNORD28-201ENST00000384706 RNF215Q9Y6U7 377 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 ZHX2Q9Y6X8 837 aa0.57□□□□□ -2.32
SNORD28-201ENST00000384706 PRRC2AP48634 2157 aaKnown RBP0.57□□□□□ -2.32
SNORD28-201ENST00000384706 FRMPD2Q68DX3 1309 aaPredicted RBP0.57□□□□□ -2.32
SNORD28-201ENST00000384706 A0A096LPK6 155 aa0.56□□□□□ -2.32
SNORD28-201ENST00000384706 TNFSF12-TNFSF13A0A0A6YY99 330 aa0.56□□□□□ -2.32
SNORD28-201ENST00000384706 A0A0J9YWU9 116 aa0.56□□□□□ -2.32
SNORD28-201ENST00000384706 C11orf97A0A1B0GVM6 126 aaPredicted RBP0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms