RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 CCT8P50990 548 aa12.86□□□□□ -0.35
DNMT3A-204ENST00000380756 MAPK10P53779 464 aa12.86□□□□□ -0.35
DNMT3A-204ENST00000380756 CDH13P55290 713 aa12.86□□□□□ -0.35
DNMT3A-204ENST00000380756 CSTF3Q12996 717 aaKnown RBP12.86□□□□□ -0.35
DNMT3A-204ENST00000380756 C9orf57Q5W0N0 161 aa12.86□□□□□ -0.35
DNMT3A-204ENST00000380756 RHBDF2Q6PJF5 856 aa12.86□□□□□ -0.35
DNMT3A-204ENST00000380756 DNAJB14Q8TBM8 379 aa12.86□□□□□ -0.35
DNMT3A-204ENST00000380756 TRPC4APQ8TEL6 797 aa12.86□□□□□ -0.35
DNMT3A-204ENST00000380756 MAGED4Q96JG8 741 aa12.86□□□□□ -0.35
DNMT3A-204ENST00000380756 POLR1EQ9GZS1 481 aaKnown RBP12.86□□□□□ -0.35
DNMT3A-204ENST00000380756 HOXC6P09630 235 aa12.85□□□□□ -0.35
DNMT3A-204ENST00000380756 SCNN1GP51170 649 aa12.85□□□□□ -0.35
DNMT3A-204ENST00000380756 ATP1A4Q13733 1029 aa12.85□□□□□ -0.35
DNMT3A-204ENST00000380756 TTC30AQ86WT1 665 aa12.85□□□□□ -0.35
DNMT3A-204ENST00000380756 RELL1Q8IUW5 271 aa12.85□□□□□ -0.35
DNMT3A-204ENST00000380756 ATG16L2Q8NAA4 619 aa12.85□□□□□ -0.35
DNMT3A-204ENST00000380756 OR52K2Q8NGK3 314 aa12.85□□□□□ -0.35
DNMT3A-204ENST00000380756 ITFG1Q8TB96 612 aa12.85□□□□□ -0.35
DNMT3A-204ENST00000380756 NDRG1Q92597 394 aaKnown RBP12.85□□□□□ -0.35
DNMT3A-204ENST00000380756 ZNF570Q96NI8 536 aa12.85□□□□□ -0.35
DNMT3A-204ENST00000380756 ZBED2Q9BTP6 218 aa12.85□□□□□ -0.35
DNMT3A-204ENST00000380756 ELOVL6Q9H5J4 265 aa12.85□□□□□ -0.35
DNMT3A-204ENST00000380756 PDZD7Q9H5P4 517 aa12.85□□□□□ -0.35
DNMT3A-204ENST00000380756 CPA4Q9UI42 421 aa12.85□□□□□ -0.35
DNMT3A-204ENST00000380756 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.85□□□□□ -0.35
DNMT3A-204ENST00000380756 PTGES3LE9PB15 166 aa12.85□□□□□ -0.35
DNMT3A-204ENST00000380756 GUCA1CO95843 209 aa12.85□□□□□ -0.35
DNMT3A-204ENST00000380756 HGFP14210 728 aa12.85□□□□□ -0.35
DNMT3A-204ENST00000380756 FMO4P31512 558 aa12.85□□□□□ -0.35
DNMT3A-204ENST00000380756 PPP3CCP48454 512 aa12.85□□□□□ -0.35
DNMT3A-204ENST00000380756 CDC16Q13042 620 aa12.85□□□□□ -0.35
DNMT3A-204ENST00000380756 TREML2Q5T2D2 321 aa12.85□□□□□ -0.35
DNMT3A-204ENST00000380756 PYROXD2Q8N2H3 581 aa12.85□□□□□ -0.35
DNMT3A-204ENST00000380756 GLT1D1Q96MS3 346 aa12.85□□□□□ -0.35
DNMT3A-204ENST00000380756 FIZ1Q96SL8 496 aa12.85□□□□□ -0.35
DNMT3A-204ENST00000380756 GORASP1Q9BQQ3 440 aa12.85□□□□□ -0.35
DNMT3A-204ENST00000380756 COLEC11Q9BWP8 271 aa12.85□□□□□ -0.35
DNMT3A-204ENST00000380756 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.85□□□□□ -0.35
DNMT3A-204ENST00000380756 DTLQ9NZJ0 730 aa12.85□□□□□ -0.35
DNMT3A-204ENST00000380756 POMPQ9Y244 141 aa12.85□□□□□ -0.35
DNMT3A-204ENST00000380756 TSC22D4Q9Y3Q8 395 aa12.85□□□□□ -0.35
DNMT3A-204ENST00000380756 PCDHB12Q9Y5F1 795 aa12.85□□□□□ -0.35
DNMT3A-204ENST00000380756 ZBTB24O43167 697 aaPredicted RBP12.85□□□□□ -0.35
DNMT3A-204ENST00000380756 AP2A1O95782 977 aa12.85□□□□□ -0.35
DNMT3A-204ENST00000380756 PSEN1P49768 467 aa12.85□□□□□ -0.35
DNMT3A-204ENST00000380756 C21orf59P57076 290 aa12.85□□□□□ -0.35
DNMT3A-204ENST00000380756 RHOAP61586 193 aa12.85□□□□□ -0.35
DNMT3A-204ENST00000380756 KLF1Q13351 362 aaPredicted RBP12.85□□□□□ -0.35
DNMT3A-204ENST00000380756 PEX6Q13608 980 aa12.85□□□□□ -0.35
DNMT3A-204ENST00000380756 PCBP1Q15365 356 aaKnown RBP eCLIP12.85□□□□□ -0.35
DNMT3A-204ENST00000380756 CA9Q16790 459 aa12.85□□□□□ -0.35
DNMT3A-204ENST00000380756 SLC10A6Q3KNW5 377 aa12.85□□□□□ -0.35
DNMT3A-204ENST00000380756 TRIM60Q495X7 471 aa12.85□□□□□ -0.35
DNMT3A-204ENST00000380756 FSTL4Q6MZW2 842 aa12.85□□□□□ -0.35
DNMT3A-204ENST00000380756 ZNF280DQ6N043 979 aa12.85□□□□□ -0.35
DNMT3A-204ENST00000380756 ZNF781Q8N8C0 355 aa12.85□□□□□ -0.35
DNMT3A-204ENST00000380756 TLR8Q9NR97 1041 aaKnown RBP12.85□□□□□ -0.35
DNMT3A-204ENST00000380756 PNPLA3Q9NST1 481 aa12.85□□□□□ -0.35
DNMT3A-204ENST00000380756 SPASTQ9UBP0 616 aa12.85□□□□□ -0.35
DNMT3A-204ENST00000380756 VPS28Q9UK41 221 aa12.85□□□□□ -0.35
DNMT3A-204ENST00000380756 CDH9Q9ULB4 789 aa12.85□□□□□ -0.35
DNMT3A-204ENST00000380756 ADAMTSL3P82987 1691 aa12.85□□□□□ -0.35
DNMT3A-204ENST00000380756 CCNT2O60583 730 aaKnown RBP12.84□□□□□ -0.35
DNMT3A-204ENST00000380756 PEX10O60683 326 aa12.84□□□□□ -0.35
DNMT3A-204ENST00000380756 KRT6AP02538 564 aa12.84□□□□□ -0.35
DNMT3A-204ENST00000380756 KRT6BP04259 564 aa12.84□□□□□ -0.35
DNMT3A-204ENST00000380756 NELFEP18615 380 aaKnown RBP12.84□□□□□ -0.35
DNMT3A-204ENST00000380756 KRT6CP48668 564 aa12.84□□□□□ -0.35
DNMT3A-204ENST00000380756 WNT3AP56704 352 aa12.84□□□□□ -0.35
DNMT3A-204ENST00000380756 CCDC85BQ15834 202 aaPredicted RBP12.84□□□□□ -0.35
DNMT3A-204ENST00000380756 ZNF567Q8N184 647 aa12.84□□□□□ -0.35
DNMT3A-204ENST00000380756 CCDC185Q8N715 623 aa12.84□□□□□ -0.35
DNMT3A-204ENST00000380756 MOSPD1Q9UJG1 213 aa12.84□□□□□ -0.35
DNMT3A-204ENST00000380756 DERAQ9Y315 318 aa12.84□□□□□ -0.35
DNMT3A-204ENST00000380756 PCDHB5Q9Y5E4 795 aa12.84□□□□□ -0.35
DNMT3A-204ENST00000380756 DHRS12A0PJE2 317 aa12.84□□□□□ -0.35
DNMT3A-204ENST00000380756 NRP2O60462 931 aa12.84□□□□□ -0.35
DNMT3A-204ENST00000380756 TKTP29401 623 aaKnown RBP12.84□□□□□ -0.35
DNMT3A-204ENST00000380756 IDH3AP50213 366 aa12.84□□□□□ -0.35
DNMT3A-204ENST00000380756 CWF19L1Q69YN2 538 aaKnown RBP12.84□□□□□ -0.35
DNMT3A-204ENST00000380756 GLT6D1Q7Z4J2 308 aa12.84□□□□□ -0.35
DNMT3A-204ENST00000380756 FAM35AQ86V20 835 aa12.84□□□□□ -0.35
DNMT3A-204ENST00000380756 HOMEZQ8IX15 550 aa12.84□□□□□ -0.35
DNMT3A-204ENST00000380756 UGT2B28Q9BY64 529 aa12.84□□□□□ -0.35
DNMT3A-204ENST00000380756 GOLGA2P5Q9HBQ8 144 aa12.84□□□□□ -0.35
DNMT3A-204ENST00000380756 ATP13A1Q9HD20 1204 aa12.84□□□□□ -0.35
DNMT3A-204ENST00000380756 GNEQ9Y223 722 aaKnown RBP12.84□□□□□ -0.35
DNMT3A-204ENST00000380756 VWA7Q9Y334 891 aa12.84□□□□□ -0.35
DNMT3A-204ENST00000380756 ZNF536O15090 1300 aa12.84□□□□□ -0.35
DNMT3A-204ENST00000380756 MYH11P35749 1972 aa12.84□□□□□ -0.35
DNMT3A-204ENST00000380756 COL6A2P12110 1019 aa12.84□□□□□ -0.35
DNMT3A-204ENST00000380756 ITGB6P18564 788 aa12.84□□□□□ -0.35
DNMT3A-204ENST00000380756 PSMB9P28065 219 aa12.84□□□□□ -0.35
DNMT3A-204ENST00000380756 PRIM2P49643 509 aa12.84□□□□□ -0.35
DNMT3A-204ENST00000380756 AIF1P55008 147 aa12.84□□□□□ -0.35
DNMT3A-204ENST00000380756 FSTL1Q12841 308 aa12.84□□□□□ -0.35
DNMT3A-204ENST00000380756 BFSP2Q13515 415 aa12.84□□□□□ -0.35
DNMT3A-204ENST00000380756 GRM3Q14832 879 aa12.84□□□□□ -0.35
DNMT3A-204ENST00000380756 FAM182AQ5T1J6 154 aa12.84□□□□□ -0.35
DNMT3A-204ENST00000380756 FAM45BPQ6NSW5 357 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms