RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 HS3ST3A1Q9Y663 406 aa17.16■□□□□ 0.34
SMN2-201ENST00000380741 CXorf51AA0A1B0GTR3 108 aa17.15■□□□□ 0.34
SMN2-201ENST00000380741 LRIG2O94898 1065 aa17.15■□□□□ 0.34
SMN2-201ENST00000380741 UNGP13051 313 aaPredicted RBP17.15■□□□□ 0.34
SMN2-201ENST00000380741 ETFBP38117 255 aa17.15■□□□□ 0.34
SMN2-201ENST00000380741 EIF2S3P41091 472 aaKnown RBP17.15■□□□□ 0.34
SMN2-201ENST00000380741 HDAC4P56524 1084 aa17.15■□□□□ 0.34
SMN2-201ENST00000380741 E2F1Q01094 437 aa17.15■□□□□ 0.34
SMN2-201ENST00000380741 PTP4A2Q12974 167 aa17.15■□□□□ 0.34
SMN2-201ENST00000380741 TRIM72Q6ZMU5 477 aa17.15■□□□□ 0.34
SMN2-201ENST00000380741 PLPP6Q8IY26 295 aa17.15■□□□□ 0.34
SMN2-201ENST00000380741 CACTIN-AS1Q8N1I8 211 aa17.15■□□□□ 0.34
SMN2-201ENST00000380741 RYBPQ8N488 228 aaPredicted RBP17.15■□□□□ 0.34
SMN2-201ENST00000380741 DCBLD1Q8N8Z6 715 aa17.15■□□□□ 0.34
SMN2-201ENST00000380741 FAM174AQ8TBP5 190 aa17.15■□□□□ 0.34
SMN2-201ENST00000380741 FAM172AQ8WUF8 416 aa17.15■□□□□ 0.34
SMN2-201ENST00000380741 CENPIQ92674 756 aaPredicted RBP17.15■□□□□ 0.34
SMN2-201ENST00000380741 IFT43Q96FT9 208 aa17.15■□□□□ 0.34
SMN2-201ENST00000380741 PCDHB18PQ96TA0 734 aa17.15■□□□□ 0.34
SMN2-201ENST00000380741 TMEM248Q9NWD8 314 aa17.15■□□□□ 0.34
SMN2-201ENST00000380741 PTPRQQ9UMZ3 2332 aa17.15■□□□□ 0.34
SMN2-201ENST00000380741 C16orf96A6NNT2 1141 aa17.14■□□□□ 0.33
SMN2-201ENST00000380741 BRINP1O60477 761 aa17.14■□□□□ 0.33
SMN2-201ENST00000380741 NEBLO76041 1014 aa17.14■□□□□ 0.33
SMN2-201ENST00000380741 PLEKP08567 350 aaPredicted RBP17.14■□□□□ 0.33
SMN2-201ENST00000380741 ALPPL2P10696 532 aa17.14■□□□□ 0.33
SMN2-201ENST00000380741 CKMT1AP12532 417 aa17.14■□□□□ 0.33
SMN2-201ENST00000380741 MYF5P13349 255 aa17.14■□□□□ 0.33
SMN2-201ENST00000380741 ITPKBP27987 946 aa17.14■□□□□ 0.33
SMN2-201ENST00000380741 ABL2P42684 1182 aa17.14■□□□□ 0.33
SMN2-201ENST00000380741 GEMIN4P57678 1058 aaKnown RBP17.14■□□□□ 0.33
SMN2-201ENST00000380741 FZD2Q14332 565 aa17.14■□□□□ 0.33
SMN2-201ENST00000380741 FKBP15Q5T1M5 1219 aa17.14■□□□□ 0.33
SMN2-201ENST00000380741 LEKR1Q6ZMV7 388 aa17.14■□□□□ 0.33
SMN2-201ENST00000380741 DCP2Q8IU60 420 aaKnown RBP17.14■□□□□ 0.33
SMN2-201ENST00000380741 VOPP1Q96AW1 172 aa17.14■□□□□ 0.33
SMN2-201ENST00000380741 TBC1D31Q96DN5 1066 aa17.14■□□□□ 0.33
SMN2-201ENST00000380741 APOLD1Q96LR9 279 aa17.14■□□□□ 0.33
SMN2-201ENST00000380741 KLF6Q99612 283 aaPredicted RBP17.14■□□□□ 0.33
SMN2-201ENST00000380741 MAGEH1Q9H213 219 aa17.14■□□□□ 0.33
SMN2-201ENST00000380741 RETREG1Q9H6L5 497 aa17.14■□□□□ 0.33
SMN2-201ENST00000380741 NLGN3Q9NZ94 848 aa17.14■□□□□ 0.33
SMN2-201ENST00000380741 GGT7Q9UJ14 662 aa17.14■□□□□ 0.33
SMN2-201ENST00000380741 ITM2BQ9Y287 266 aa17.14■□□□□ 0.33
SMN2-201ENST00000380741 SIK3Q9Y2K2 1263 aa17.14■□□□□ 0.33
SMN2-201ENST00000380741 SHROOM3Q8TF72 1996 aa17.13■□□□□ 0.33
SMN2-201ENST00000380741 LY6G6EA0A0G2JKS1 128 aa17.13■□□□□ 0.33
SMN2-201ENST00000380741 SPTY2D1-AS1A0A0U1RR47 76 aa17.13■□□□□ 0.33
SMN2-201ENST00000380741 IGLON5A6NGN9 336 aa17.13■□□□□ 0.33
SMN2-201ENST00000380741 KRIT1O00522 736 aa17.13■□□□□ 0.33
SMN2-201ENST00000380741 SCAMP1O15126 338 aa17.13■□□□□ 0.33
SMN2-201ENST00000380741 SPINT1O43278 529 aa17.13■□□□□ 0.33
SMN2-201ENST00000380741 RAMP2O60895 175 aa17.13■□□□□ 0.33
SMN2-201ENST00000380741 GSRP00390 522 aa17.13■□□□□ 0.33
SMN2-201ENST00000380741 MT-CO3P00414 261 aa17.13■□□□□ 0.33
SMN2-201ENST00000380741 UGT2B4P06133 528 aa17.13■□□□□ 0.33
SMN2-201ENST00000380741 TPM2P07951 284 aa17.13■□□□□ 0.33
SMN2-201ENST00000380741 KRT3P12035 628 aa17.13■□□□□ 0.33
SMN2-201ENST00000380741 RFC1P35251 1148 aaPredicted RBP17.13■□□□□ 0.33
SMN2-201ENST00000380741 STAT1P42224 750 aa17.13■□□□□ 0.33
SMN2-201ENST00000380741 NSFP46459 744 aaKnown RBP17.13■□□□□ 0.33
SMN2-201ENST00000380741 RABIFP47224 123 aa17.13■□□□□ 0.33
SMN2-201ENST00000380741 GSCP56915 257 aaPredicted RBP17.13■□□□□ 0.33
SMN2-201ENST00000380741 HNRNPKP61978 463 aaKnown RBP eCLIP17.13■□□□□ 0.33
SMN2-201ENST00000380741 POLD3Q15054 466 aaPredicted RBP17.13■□□□□ 0.33
SMN2-201ENST00000380741 ZNF805Q5CZA5 627 aa17.13■□□□□ 0.33
SMN2-201ENST00000380741 TPRG1LQ5T0D9 272 aa17.13■□□□□ 0.33
SMN2-201ENST00000380741 KDM7AQ6ZMT4 941 aa17.13■□□□□ 0.33
SMN2-201ENST00000380741 PARGQ86W56 976 aa17.13■□□□□ 0.33
SMN2-201ENST00000380741 OR2AP1Q8NGE2 309 aa17.13■□□□□ 0.33
SMN2-201ENST00000380741 NTAN1Q96AB6 310 aa17.13■□□□□ 0.33
SMN2-201ENST00000380741 RAB7BQ96AH8 199 aa17.13■□□□□ 0.33
SMN2-201ENST00000380741 LENG8Q96PV6 779 aaPredicted RBP17.13■□□□□ 0.33
SMN2-201ENST00000380741 C1QTNF2Q9BXJ5 285 aa17.13■□□□□ 0.33
SMN2-201ENST00000380741 LMBRD1Q9NUN5 540 aa17.13■□□□□ 0.33
SMN2-201ENST00000380741 ADAM22Q9P0K1 906 aa17.13■□□□□ 0.33
SMN2-201ENST00000380741 HPCAL4Q9UM19 191 aa17.13■□□□□ 0.33
SMN2-201ENST00000380741 U3KQA8 63 aa17.13■□□□□ 0.33
SMN2-201ENST00000380741 NEMP2A6NFY4 417 aa17.12■□□□□ 0.33
SMN2-201ENST00000380741 K7ESM1 405 aa17.12■□□□□ 0.33
SMN2-201ENST00000380741 NEMP1O14524 444 aa17.12■□□□□ 0.33
SMN2-201ENST00000380741 FPGTO14772 594 aa17.12■□□□□ 0.33
SMN2-201ENST00000380741 TSPAN6O43657 245 aa17.12■□□□□ 0.33
SMN2-201ENST00000380741 CSF2P04141 144 aa17.12■□□□□ 0.33
SMN2-201ENST00000380741 NME1P15531 152 aaKnown RBP17.12■□□□□ 0.33
SMN2-201ENST00000380741 GPD1P21695 349 aa17.12■□□□□ 0.33
SMN2-201ENST00000380741 SNRPD1P62314 119 aaKnown RBP17.12■□□□□ 0.33
SMN2-201ENST00000380741 SGCGQ13326 291 aa17.12■□□□□ 0.33
SMN2-201ENST00000380741 PDE1CQ14123 709 aaPredicted RBP17.12■□□□□ 0.33
SMN2-201ENST00000380741 CLEC16AQ2KHT3 1053 aa17.12■□□□□ 0.33
SMN2-201ENST00000380741 ATXN7L2Q5T6C5 722 aaPredicted RBP17.12■□□□□ 0.33
SMN2-201ENST00000380741 LRRC69Q6ZNQ3 347 aa17.12■□□□□ 0.33
SMN2-201ENST00000380741 ZSCAN30Q86W11 494 aa17.12■□□□□ 0.33
SMN2-201ENST00000380741 FAM181AQ8N9Y4 354 aa17.12■□□□□ 0.33
SMN2-201ENST00000380741 ZNF548Q8NEK5 533 aaPredicted RBP17.12■□□□□ 0.33
SMN2-201ENST00000380741 SNIP1Q8TAD8 396 aaKnown RBP17.12■□□□□ 0.33
SMN2-201ENST00000380741 DUSP23Q9BVJ7 150 aa17.12■□□□□ 0.33
SMN2-201ENST00000380741 FANCLQ9NW38 375 aa17.12■□□□□ 0.33
SMN2-201ENST00000380741 KLF15Q9UIH9 416 aa17.12■□□□□ 0.33
SMN2-201ENST00000380741 DAAM1Q9Y4D1 1078 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms