RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 VAV1P15498 845 aa16.21■□□□□ 0.19
COL2A1-202ENST00000380518 ERCC2P18074 760 aa16.21■□□□□ 0.19
COL2A1-202ENST00000380518 HSPA14Q0VDF9 509 aa16.21■□□□□ 0.19
COL2A1-202ENST00000380518 AFTPHQ6ULP2 937 aa16.21■□□□□ 0.19
COL2A1-202ENST00000380518 C12orf56Q8IXR9 622 aa16.21■□□□□ 0.19
COL2A1-202ENST00000380518 USP7Q93009 1102 aa16.21■□□□□ 0.19
COL2A1-202ENST00000380518 UBE2E3Q969T4 207 aa16.21■□□□□ 0.19
COL2A1-202ENST00000380518 GNPTGQ9UJJ9 305 aa16.21■□□□□ 0.19
COL2A1-202ENST00000380518 MST1RQ04912 1400 aa16.21■□□□□ 0.19
COL2A1-202ENST00000380518 AMHP03971 560 aa16.21■□□□□ 0.19
COL2A1-202ENST00000380518 GRIA3P42263 894 aa16.21■□□□□ 0.19
COL2A1-202ENST00000380518 C21orf59P57076 290 aa16.21■□□□□ 0.19
COL2A1-202ENST00000380518 NAIF1Q69YI7 327 aaPredicted RBP16.21■□□□□ 0.19
COL2A1-202ENST00000380518 TTC27Q6P3X3 843 aa16.21■□□□□ 0.19
COL2A1-202ENST00000380518 FBXL19Q6PCT2 694 aa16.21■□□□□ 0.19
COL2A1-202ENST00000380518 VMP1Q96GC9 406 aa16.21■□□□□ 0.19
COL2A1-202ENST00000380518 SPAG4Q9NPE6 437 aa16.21■□□□□ 0.19
COL2A1-202ENST00000380518 PTCH2Q9Y6C5 1203 aa16.21■□□□□ 0.19
COL2A1-202ENST00000380518 ANKDD1BA6NHY2 528 aa16.21■□□□□ 0.19
COL2A1-202ENST00000380518 NBNO60934 754 aa16.21■□□□□ 0.19
COL2A1-202ENST00000380518 SH3BGRLO75368 114 aa16.21■□□□□ 0.19
COL2A1-202ENST00000380518 CABYRO75952 493 aa16.21■□□□□ 0.19
COL2A1-202ENST00000380518 GOT1P17174 413 aa16.21■□□□□ 0.19
COL2A1-202ENST00000380518 SKP1P63208 163 aa16.21■□□□□ 0.19
COL2A1-202ENST00000380518 LRRC52Q8N7C0 313 aa16.21■□□□□ 0.19
COL2A1-202ENST00000380518 RP9Q8TA86 221 aaKnown RBP16.21■□□□□ 0.19
COL2A1-202ENST00000380518 NKX2-3Q8TAU0 364 aa16.21■□□□□ 0.19
COL2A1-202ENST00000380518 ANKRD49Q8WVL7 239 aa16.21■□□□□ 0.19
COL2A1-202ENST00000380518 PPP3R2Q96LZ3 170 aa16.21■□□□□ 0.19
COL2A1-202ENST00000380518 DNMT3LQ9UJW3 386 aa16.21■□□□□ 0.19
COL2A1-202ENST00000380518 COL5A2P05997 1499 aaPredicted RBP16.2■□□□□ 0.18
COL2A1-202ENST00000380518 ROBO3Q96MS0 1386 aa16.2■□□□□ 0.18
COL2A1-202ENST00000380518 SF3B1O75533 1304 aaKnown RBP eCLIP16.2■□□□□ 0.18
COL2A1-202ENST00000380518 A0A088AWK7 358 aa16.2■□□□□ 0.18
COL2A1-202ENST00000380518 A8MX80 341 aa16.2■□□□□ 0.18
COL2A1-202ENST00000380518 SPATA31C2B4DYI2 1134 aa16.2■□□□□ 0.18
COL2A1-202ENST00000380518 BUD23O43709 281 aaKnown RBP16.2■□□□□ 0.18
COL2A1-202ENST00000380518 ZNF10P21506 573 aaPredicted RBP16.2■□□□□ 0.18
COL2A1-202ENST00000380518 MATKP42679 507 aa16.2■□□□□ 0.18
COL2A1-202ENST00000380518 COX10Q12887 443 aa16.2■□□□□ 0.18
COL2A1-202ENST00000380518 HYIQ5T013 277 aa16.2■□□□□ 0.18
COL2A1-202ENST00000380518 MAP2P11137 1827 aaKnown RBP16.2■□□□□ 0.18
COL2A1-202ENST00000380518 SNRPD1P62314 119 aaKnown RBP16.2■□□□□ 0.18
COL2A1-202ENST00000380518 STX4Q12846 297 aa16.2■□□□□ 0.18
COL2A1-202ENST00000380518 MAPKAPK3Q16644 382 aa16.2■□□□□ 0.18
COL2A1-202ENST00000380518 IL31RAQ8NI17 732 aa16.2■□□□□ 0.18
COL2A1-202ENST00000380518 MAGEE2Q8TD90 523 aaPredicted RBP16.2■□□□□ 0.18
COL2A1-202ENST00000380518 SEMA3CQ99985 751 aa16.2■□□□□ 0.18
COL2A1-202ENST00000380518 C1QTNF7Q9BXJ2 289 aa16.2■□□□□ 0.18
COL2A1-202ENST00000380518 FHDC1Q9C0D6 1143 aaPredicted RBP16.2■□□□□ 0.18
COL2A1-202ENST00000380518 RPL26L1Q9UNX3 145 aaKnown RBP16.2■□□□□ 0.18
COL2A1-202ENST00000380518 CLUHO75153 1309 aa16.2■□□□□ 0.18
COL2A1-202ENST00000380518 WTIPA6NIX2 430 aaPredicted RBP16.2■□□□□ 0.18
COL2A1-202ENST00000380518 ULK1O75385 1050 aa16.2■□□□□ 0.18
COL2A1-202ENST00000380518 LYPLA2O95372 231 aa16.2■□□□□ 0.18
COL2A1-202ENST00000380518 FLT3P36888 993 aa16.2■□□□□ 0.18
COL2A1-202ENST00000380518 TAS2R40P59535 323 aa16.2■□□□□ 0.18
COL2A1-202ENST00000380518 TOP3AQ13472 1001 aaPredicted RBP16.2■□□□□ 0.18
COL2A1-202ENST00000380518 KCTD4Q8WVF5 259 aa16.2■□□□□ 0.18
COL2A1-202ENST00000380518 ALG3Q92685 438 aa16.2■□□□□ 0.18
COL2A1-202ENST00000380518 MFSD14AQ96MC6 490 aa16.2■□□□□ 0.18
COL2A1-202ENST00000380518 HMG20AQ9NP66 347 aa16.2■□□□□ 0.18
COL2A1-202ENST00000380518 TMEM39AQ9NV64 488 aa16.2■□□□□ 0.18
COL2A1-202ENST00000380518 FBXO5Q9UKT4 447 aa16.2■□□□□ 0.18
COL2A1-202ENST00000380518 TRIM38O00635 465 aa16.2■□□□□ 0.18
COL2A1-202ENST00000380518 KPNA5O15131 536 aa16.2■□□□□ 0.18
COL2A1-202ENST00000380518 TSPAN19P0C672 248 aa16.2■□□□□ 0.18
COL2A1-202ENST00000380518 CHN2P52757 468 aa16.2■□□□□ 0.18
COL2A1-202ENST00000380518 MAPK11Q15759 364 aa16.2■□□□□ 0.18
COL2A1-202ENST00000380518 PTPRNQ16849 979 aa16.2■□□□□ 0.18
COL2A1-202ENST00000380518 TTC7BQ86TV6 843 aa16.2■□□□□ 0.18
COL2A1-202ENST00000380518 ST13P5Q8NFI4 369 aaPredicted RBP16.2■□□□□ 0.18
COL2A1-202ENST00000380518 FNIP1Q8TF40 1166 aa16.2■□□□□ 0.18
COL2A1-202ENST00000380518 GRIP2Q9C0E4 1043 aa16.2■□□□□ 0.18
COL2A1-202ENST00000380518 HMX1Q9NP08 348 aaPredicted RBP16.2■□□□□ 0.18
COL2A1-202ENST00000380518 H0YC42 278 aa16.19■□□□□ 0.18
COL2A1-202ENST00000380518 SGTAO43765 313 aa16.19■□□□□ 0.18
COL2A1-202ENST00000380518 STX11O75558 287 aa16.19■□□□□ 0.18
COL2A1-202ENST00000380518 GABRB2P47870 512 aa16.19■□□□□ 0.18
COL2A1-202ENST00000380518 TNK2Q07912 1038 aa16.19■□□□□ 0.18
COL2A1-202ENST00000380518 TAF5Q15542 800 aa16.19■□□□□ 0.18
COL2A1-202ENST00000380518 FNDC3BQ53EP0 1204 aaKnown RBP16.19■□□□□ 0.18
COL2A1-202ENST00000380518 HLA-DQA1Q5Y7H0 255 aa16.19■□□□□ 0.18
COL2A1-202ENST00000380518 DOK6Q6PKX4 331 aa16.19■□□□□ 0.18
COL2A1-202ENST00000380518 CERS5Q8N5B7 392 aa16.19■□□□□ 0.18
COL2A1-202ENST00000380518 LGMNQ99538 433 aa16.19■□□□□ 0.18
COL2A1-202ENST00000380518 REXO4Q9GZR2 422 aaKnown RBP16.19■□□□□ 0.18
COL2A1-202ENST00000380518 ZDHHC6Q9H6R6 413 aa16.19■□□□□ 0.18
COL2A1-202ENST00000380518 PSME2Q9UL46 239 aa16.19■□□□□ 0.18
COL2A1-202ENST00000380518 SERPINA6P08185 405 aa16.19■□□□□ 0.18
COL2A1-202ENST00000380518 FGFR3P22607 806 aa16.19■□□□□ 0.18
COL2A1-202ENST00000380518 KCNJ2P63252 427 aa16.19■□□□□ 0.18
COL2A1-202ENST00000380518 GSTA3Q16772 222 aa16.19■□□□□ 0.18
COL2A1-202ENST00000380518 TPGS1Q6ZTW0 290 aa16.19■□□□□ 0.18
COL2A1-202ENST00000380518 SUSD6Q92537 303 aa16.19■□□□□ 0.18
COL2A1-202ENST00000380518 MAGEB10Q96LZ2 347 aaPredicted RBP16.19■□□□□ 0.18
COL2A1-202ENST00000380518 MYPNQ86TC9 1320 aa16.19■□□□□ 0.18
COL2A1-202ENST00000380518 TCRBV9S1A1TA0A576 114 aa16.19■□□□□ 0.18
COL2A1-202ENST00000380518 ASNA1O43681 348 aa16.19■□□□□ 0.18
COL2A1-202ENST00000380518 BANF1O75531 89 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms