RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 URI1O94763 535 aaPredicted RBP14.04□□□□□ -0.16
PRPF18-202ENST00000378572 IGLV3-25P01717 112 aa14.04□□□□□ -0.16
PRPF18-202ENST00000378572 CCR5P51681 352 aa14.04□□□□□ -0.16
PRPF18-202ENST00000378572 ZNF143P52747 638 aaPredicted RBP14.04□□□□□ -0.16
PRPF18-202ENST00000378572 PPP2CBP62714 309 aa14.04□□□□□ -0.16
PRPF18-202ENST00000378572 PPP2CAP67775 309 aa14.04□□□□□ -0.16
PRPF18-202ENST00000378572 OGDHQ02218 1023 aa14.04□□□□□ -0.16
PRPF18-202ENST00000378572 ZNF177Q13360 481 aaPredicted RBP14.04□□□□□ -0.16
PRPF18-202ENST00000378572 COL28A1Q2UY09 1125 aa14.04□□□□□ -0.16
PRPF18-202ENST00000378572 DBX2Q6ZNG2 339 aa14.04□□□□□ -0.16
PRPF18-202ENST00000378572 PTPRN2Q92932 1015 aa14.04□□□□□ -0.16
PRPF18-202ENST00000378572 CNDP2Q96KP4 475 aaKnown RBP14.04□□□□□ -0.16
PRPF18-202ENST00000378572 FAM129BQ96TA1 746 aa14.04□□□□□ -0.16
PRPF18-202ENST00000378572 CNPY3Q9BT09 278 aa14.04□□□□□ -0.16
PRPF18-202ENST00000378572 MUC3BQ9H195 1237 aa14.04□□□□□ -0.16
PRPF18-202ENST00000378572 CDC23Q9UJX2 597 aa14.04□□□□□ -0.16
PRPF18-202ENST00000378572 PLXNB3Q9ULL4 1909 aa14.04□□□□□ -0.16
PRPF18-202ENST00000378572 FREM2Q5SZK8 3169 aa14.04□□□□□ -0.16
PRPF18-202ENST00000378572 CABIN1Q9Y6J0 2220 aa14.04□□□□□ -0.16
PRPF18-202ENST00000378572 TMEM110-MUSTN1A8MSY1 372 aa14.04□□□□□ -0.16
PRPF18-202ENST00000378572 DAB1O75553 588 aa14.04□□□□□ -0.16
PRPF18-202ENST00000378572 LDOC1O95751 146 aaPredicted RBP14.04□□□□□ -0.16
PRPF18-202ENST00000378572 WNT1P04628 370 aa14.04□□□□□ -0.16
PRPF18-202ENST00000378572 C7P10643 843 aa14.04□□□□□ -0.16
PRPF18-202ENST00000378572 PSMA2P25787 234 aa14.04□□□□□ -0.16
PRPF18-202ENST00000378572 CTNNA1P35221 906 aaKnown RBP14.04□□□□□ -0.16
PRPF18-202ENST00000378572 FLT3P36888 993 aa14.04□□□□□ -0.16
PRPF18-202ENST00000378572 PTPN9P43378 593 aa14.04□□□□□ -0.16
PRPF18-202ENST00000378572 CYP4F3Q08477 520 aa14.04□□□□□ -0.16
PRPF18-202ENST00000378572 FAM46CQ5VWP2 391 aa14.04□□□□□ -0.16
PRPF18-202ENST00000378572 FBXL22Q6P050 247 aa14.04□□□□□ -0.16
PRPF18-202ENST00000378572 PRPF39Q86UA1 669 aaKnown RBP14.04□□□□□ -0.16
PRPF18-202ENST00000378572 EID2Q8N6I1 236 aa14.04□□□□□ -0.16
PRPF18-202ENST00000378572 EMC1Q8N766 993 aa14.04□□□□□ -0.16
PRPF18-202ENST00000378572 HNRNPLLQ8WVV9 542 aaKnown RBP14.04□□□□□ -0.16
PRPF18-202ENST00000378572 RXFP2Q8WXD0 754 aa14.04□□□□□ -0.16
PRPF18-202ENST00000378572 SLC2A13Q96QE2 648 aa14.04□□□□□ -0.16
PRPF18-202ENST00000378572 OSBPL9Q96SU4 736 aa14.04□□□□□ -0.16
PRPF18-202ENST00000378572 SIK2Q9H0K1 926 aa14.04□□□□□ -0.16
PRPF18-202ENST00000378572 EBF2Q9HAK2 575 aa14.04□□□□□ -0.16
PRPF18-202ENST00000378572 GPSM3Q9Y4H4 160 aa14.04□□□□□ -0.16
PRPF18-202ENST00000378572 MRFAP1Q9Y605 127 aa14.04□□□□□ -0.16
PRPF18-202ENST00000378572 TRABD2BA6NFA1 517 aa14.03□□□□□ -0.16
PRPF18-202ENST00000378572 M0QYT0 321 aa14.03□□□□□ -0.16
PRPF18-202ENST00000378572 CBX4O00257 560 aa14.03□□□□□ -0.16
PRPF18-202ENST00000378572 YKT6O15498 198 aa14.03□□□□□ -0.16
PRPF18-202ENST00000378572 DDX3YO15523 660 aaKnown RBP14.03□□□□□ -0.16
PRPF18-202ENST00000378572 PSTPIP1O43586 416 aa14.03□□□□□ -0.16
PRPF18-202ENST00000378572 DESP17661 470 aa14.03□□□□□ -0.16
PRPF18-202ENST00000378572 SDC4P31431 198 aa14.03□□□□□ -0.16
PRPF18-202ENST00000378572 METAP1P53582 386 aa14.03□□□□□ -0.16
PRPF18-202ENST00000378572 RNASE9P60153 205 aaKnown RBP14.03□□□□□ -0.16
PRPF18-202ENST00000378572 AUHQ13825 339 aaKnown RBP14.03□□□□□ -0.16
PRPF18-202ENST00000378572 LRRC38Q5VT99 294 aa14.03□□□□□ -0.16
PRPF18-202ENST00000378572 NAPEPLDQ6IQ20 393 aa14.03□□□□□ -0.16
PRPF18-202ENST00000378572 TRNP1Q6NT89 227 aa14.03□□□□□ -0.16
PRPF18-202ENST00000378572 Q6ZVU0 165 aa14.03□□□□□ -0.16
PRPF18-202ENST00000378572 UBL4BQ8N7F7 174 aa14.03□□□□□ -0.16
PRPF18-202ENST00000378572 PBKQ96KB5 322 aa14.03□□□□□ -0.16
PRPF18-202ENST00000378572 PRMT1Q99873 361 aaKnown RBP14.03□□□□□ -0.16
PRPF18-202ENST00000378572 CARD9Q9H257 536 aa14.03□□□□□ -0.16
PRPF18-202ENST00000378572 TPX2Q9ULW0 747 aaKnown RBP14.03□□□□□ -0.16
PRPF18-202ENST00000378572 PACSIN2Q9UNF0 486 aaPredicted RBP14.03□□□□□ -0.16
PRPF18-202ENST00000378572 PCDHA3Q9Y5H8 950 aa14.03□□□□□ -0.16
PRPF18-202ENST00000378572 TLR4O00206 839 aa14.02□□□□□ -0.16
PRPF18-202ENST00000378572 WNT9AO14904 365 aa14.02□□□□□ -0.16
PRPF18-202ENST00000378572 EPHA8P29322 1005 aaPredicted RBP14.02□□□□□ -0.16
PRPF18-202ENST00000378572 NOS2P35228 1153 aa14.02□□□□□ -0.16
PRPF18-202ENST00000378572 PCK1P35558 622 aa14.02□□□□□ -0.16
PRPF18-202ENST00000378572 HNF1BP35680 557 aa14.02□□□□□ -0.16
PRPF18-202ENST00000378572 DNAJC3Q13217 504 aa14.02□□□□□ -0.16
PRPF18-202ENST00000378572 WHAMMP3Q1A5X7 153 aa14.02□□□□□ -0.16
PRPF18-202ENST00000378572 CXorf57Q6NSI4 855 aaKnown RBP14.02□□□□□ -0.16
PRPF18-202ENST00000378572 RHOT1Q8IXI2 618 aa14.02□□□□□ -0.16
PRPF18-202ENST00000378572 DCBLD2Q96PD2 775 aa14.02□□□□□ -0.16
PRPF18-202ENST00000378572 MYOCQ99972 504 aa14.02□□□□□ -0.16
PRPF18-202ENST00000378572 RRN3Q9NYV6 651 aa14.02□□□□□ -0.16
PRPF18-202ENST00000378572 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.02□□□□□ -0.16
PRPF18-202ENST00000378572 RNF14Q9UBS8 474 aa14.02□□□□□ -0.16
PRPF18-202ENST00000378572 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.02□□□□□ -0.16
PRPF18-202ENST00000378572 FARP1Q9Y4F1 1045 aaPredicted RBP14.02□□□□□ -0.16
PRPF18-202ENST00000378572 HS3ST4Q9Y661 456 aa14.02□□□□□ -0.16
PRPF18-202ENST00000378572 PAGE1O75459 146 aa14.01□□□□□ -0.17
PRPF18-202ENST00000378572 RFPL3O75679 317 aa14.01□□□□□ -0.17
PRPF18-202ENST00000378572 RNF8O76064 485 aa14.01□□□□□ -0.17
PRPF18-202ENST00000378572 CAPNS1P04632 268 aa14.01□□□□□ -0.17
PRPF18-202ENST00000378572 RHOCP08134 193 aa14.01□□□□□ -0.17
PRPF18-202ENST00000378572 JUPP14923 745 aa14.01□□□□□ -0.17
PRPF18-202ENST00000378572 DRD3P35462 400 aa14.01□□□□□ -0.17
PRPF18-202ENST00000378572 SULT1E1P49888 294 aa14.01□□□□□ -0.17
PRPF18-202ENST00000378572 PEX5P50542 639 aa14.01□□□□□ -0.17
PRPF18-202ENST00000378572 IRAK1P51617 712 aa14.01□□□□□ -0.17
PRPF18-202ENST00000378572 NXPH1P58417 271 aa14.01□□□□□ -0.17
PRPF18-202ENST00000378572 CNTN1Q12860 1018 aa14.01□□□□□ -0.17
PRPF18-202ENST00000378572 MTA1Q13330 715 aa14.01□□□□□ -0.17
PRPF18-202ENST00000378572 STAT4Q14765 748 aa14.01□□□□□ -0.17
PRPF18-202ENST00000378572 DLG2Q15700 870 aa14.01□□□□□ -0.17
PRPF18-202ENST00000378572 POLNQ7Z5Q5 900 aa14.01□□□□□ -0.17
PRPF18-202ENST00000378572 PDZD3Q86UT5 571 aa14.01□□□□□ -0.17
PRPF18-202ENST00000378572 OXR1Q8N573 874 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms