RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 GSTA3Q16772 222 aa11.4□□□□□ -0.58
RPGR-203ENST00000378505 NOMO2Q5JPE7 1267 aa11.4□□□□□ -0.58
RPGR-203ENST00000378505 NECAB2Q7Z6G3 386 aa11.4□□□□□ -0.58
RPGR-203ENST00000378505 TMEM132CQ8N3T6 1108 aa11.4□□□□□ -0.58
RPGR-203ENST00000378505 FITM2Q8N6M3 262 aa11.4□□□□□ -0.58
RPGR-203ENST00000378505 FAM13CQ8NE31 585 aa11.4□□□□□ -0.58
RPGR-203ENST00000378505 PHF21AQ96BD5 680 aa11.4□□□□□ -0.58
RPGR-203ENST00000378505 PTCD3Q96EY7 689 aaKnown RBP11.4□□□□□ -0.58
RPGR-203ENST00000378505 NMUR2Q9GZQ4 415 aa11.4□□□□□ -0.58
RPGR-203ENST00000378505 SEMA6AQ9H2E6 1030 aa11.4□□□□□ -0.58
RPGR-203ENST00000378505 VPS45Q9NRW7 570 aa11.4□□□□□ -0.58
RPGR-203ENST00000378505 ARL15Q9NXU5 204 aa11.4□□□□□ -0.58
RPGR-203ENST00000378505 ZNF180Q9UJW8 692 aa11.4□□□□□ -0.58
RPGR-203ENST00000378505 TMCO1Q9UM00 188 aa11.4□□□□□ -0.58
RPGR-203ENST00000378505 VWA7Q9Y334 891 aa11.4□□□□□ -0.58
RPGR-203ENST00000378505 RGS5O15539 181 aa11.4□□□□□ -0.58
RPGR-203ENST00000378505 PEX11AO75192 247 aa11.4□□□□□ -0.58
RPGR-203ENST00000378505 BCL10O95999 233 aa11.4□□□□□ -0.58
RPGR-203ENST00000378505 CDK18Q07002 472 aa11.4□□□□□ -0.58
RPGR-203ENST00000378505 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.4□□□□□ -0.58
RPGR-203ENST00000378505 ACSM2AQ08AH3 577 aa11.4□□□□□ -0.58
RPGR-203ENST00000378505 PLD1Q13393 1074 aa11.4□□□□□ -0.58
RPGR-203ENST00000378505 CRY1Q16526 586 aa11.4□□□□□ -0.58
RPGR-203ENST00000378505 ACBD5Q5T8D3 534 aaPredicted RBP11.4□□□□□ -0.58
RPGR-203ENST00000378505 ACSM2BQ68CK6 577 aa11.4□□□□□ -0.58
RPGR-203ENST00000378505 ERAP2Q6P179 960 aa11.4□□□□□ -0.58
RPGR-203ENST00000378505 PMF1Q6P1K2 205 aa11.4□□□□□ -0.58
RPGR-203ENST00000378505 CLVS1Q8IUQ0 354 aaPredicted RBP11.4□□□□□ -0.58
RPGR-203ENST00000378505 NETO2Q8NC67 525 aa11.4□□□□□ -0.58
RPGR-203ENST00000378505 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.4□□□□□ -0.58
RPGR-203ENST00000378505 PDZD7Q9H5P4 517 aa11.4□□□□□ -0.58
RPGR-203ENST00000378505 PNPOQ9NVS9 261 aa11.4□□□□□ -0.58
RPGR-203ENST00000378505 AJAP1Q9UKB5 411 aaPredicted RBP11.4□□□□□ -0.58
RPGR-203ENST00000378505 PADI4Q9UM07 663 aa11.4□□□□□ -0.58
RPGR-203ENST00000378505 DOLKQ9UPQ8 538 aa11.4□□□□□ -0.58
RPGR-203ENST00000378505 SF3B1O75533 1304 aaKnown RBP eCLIP11.4□□□□□ -0.588e-6■■■■■ 107
RPGR-203ENST00000378505 GSC2O15499 205 aa11.4□□□□□ -0.59
RPGR-203ENST00000378505 PQBP1O60828 265 aaKnown RBP11.4□□□□□ -0.59
RPGR-203ENST00000378505 RECQL5O94762 991 aaPredicted RBP11.4□□□□□ -0.59
RPGR-203ENST00000378505 PIK3R1P27986 724 aa11.4□□□□□ -0.59
RPGR-203ENST00000378505 MAPK8P45983 427 aa11.4□□□□□ -0.59
RPGR-203ENST00000378505 UBE3AQ05086 875 aa11.4□□□□□ -0.59
RPGR-203ENST00000378505 GRIK3Q13003 919 aa11.4□□□□□ -0.59
RPGR-203ENST00000378505 USP4Q13107 963 aa11.4□□□□□ -0.59
RPGR-203ENST00000378505 FNBP1LQ5T0N5 605 aa11.4□□□□□ -0.59
RPGR-203ENST00000378505 NAIF1Q69YI7 327 aaPredicted RBP11.4□□□□□ -0.59
RPGR-203ENST00000378505 AFTPHQ6ULP2 937 aa11.4□□□□□ -0.59
RPGR-203ENST00000378505 C16orf59Q7L2K0 433 aa11.4□□□□□ -0.59
RPGR-203ENST00000378505 ZNF467Q7Z7K2 595 aaPredicted RBP11.4□□□□□ -0.59
RPGR-203ENST00000378505 TTC7BQ86TV6 843 aa11.4□□□□□ -0.59
RPGR-203ENST00000378505 OOSP2Q86WS3 158 aa11.4□□□□□ -0.59
RPGR-203ENST00000378505 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.4□□□□□ -0.59
RPGR-203ENST00000378505 HDAC10Q969S8 669 aa11.4□□□□□ -0.59
RPGR-203ENST00000378505 RCN3Q96D15 328 aa11.4□□□□□ -0.59
RPGR-203ENST00000378505 C7orf26Q96N11 449 aa11.4□□□□□ -0.59
RPGR-203ENST00000378505 SLC7A5P2Q9GIP4 190 aa11.4□□□□□ -0.59
RPGR-203ENST00000378505 CDH19Q9H159 772 aa11.4□□□□□ -0.59
RPGR-203ENST00000378505 DPP7Q9UHL4 492 aa11.4□□□□□ -0.59
RPGR-203ENST00000378505 PACSIN3Q9UKS6 424 aa11.4□□□□□ -0.59
RPGR-203ENST00000378505 LMO7Q8WWI1 1683 aa11.39□□□□□ -0.59
RPGR-203ENST00000378505 PRR23AA6NEV1 266 aa11.39□□□□□ -0.59
RPGR-203ENST00000378505 FGF1P05230 155 aa11.39□□□□□ -0.59
RPGR-203ENST00000378505 PAX7P23759 505 aa11.39□□□□□ -0.59
RPGR-203ENST00000378505 KRT20P35900 424 aa11.39□□□□□ -0.59
RPGR-203ENST00000378505 GRIA3P42263 894 aa11.39□□□□□ -0.59
RPGR-203ENST00000378505 MRPL28Q13084 256 aaKnown RBP11.39□□□□□ -0.59
RPGR-203ENST00000378505 TUSC3Q13454 348 aa11.39□□□□□ -0.59
RPGR-203ENST00000378505 NRF1Q16656 503 aa11.39□□□□□ -0.59
RPGR-203ENST00000378505 CERCAMQ5T4B2 595 aa11.39□□□□□ -0.59
RPGR-203ENST00000378505 ARMC6Q6NXE6 501 aa11.39□□□□□ -0.59
RPGR-203ENST00000378505 CLYBLQ8N0X4 340 aa11.39□□□□□ -0.59
RPGR-203ENST00000378505 MARK4Q96L34 752 aa11.39□□□□□ -0.59
RPGR-203ENST00000378505 OSBPL7Q9BZF2 842 aa11.39□□□□□ -0.59
RPGR-203ENST00000378505 SDCBP2Q9H190 292 aa11.39□□□□□ -0.59
RPGR-203ENST00000378505 HMX1Q9NP08 348 aaPredicted RBP11.39□□□□□ -0.59
RPGR-203ENST00000378505 RHBDL2Q9NX52 303 aa11.39□□□□□ -0.59
RPGR-203ENST00000378505 KLQ9UEF7 1012 aa11.39□□□□□ -0.59
RPGR-203ENST00000378505 LEF1Q9UJU2 399 aaPredicted RBP11.39□□□□□ -0.59
RPGR-203ENST00000378505 ATRNL1Q5VV63 1379 aa11.39□□□□□ -0.59
RPGR-203ENST00000378505 RASSF9O75901 435 aa11.39□□□□□ -0.59
RPGR-203ENST00000378505 ATG7O95352 703 aa11.39□□□□□ -0.59
RPGR-203ENST00000378505 ANXA5P08758 320 aa11.39□□□□□ -0.59
RPGR-203ENST00000378505 OCM2P0CE71 109 aa11.39□□□□□ -0.59
RPGR-203ENST00000378505 OCMP0CE72 109 aaPredicted RBP11.39□□□□□ -0.59
RPGR-203ENST00000378505 CKBP12277 381 aa11.39□□□□□ -0.59
RPGR-203ENST00000378505 CDC25CP30307 473 aa11.39□□□□□ -0.59
RPGR-203ENST00000378505 CD52P31358 61 aa11.39□□□□□ -0.59
RPGR-203ENST00000378505 CHN2P52757 468 aa11.39□□□□□ -0.59
RPGR-203ENST00000378505 MAXP61244 160 aa11.39□□□□□ -0.59
RPGR-203ENST00000378505 ATP6V0D1P61421 351 aa11.39□□□□□ -0.59
RPGR-203ENST00000378505 ANKRD22Q5VYY1 191 aa11.39□□□□□ -0.59
RPGR-203ENST00000378505 STARD8Q92502 1023 aa11.39□□□□□ -0.59
RPGR-203ENST00000378505 CYLDQ9NQC7 956 aa11.39□□□□□ -0.59
RPGR-203ENST00000378505 KRT84Q9NSB2 600 aa11.39□□□□□ -0.59
RPGR-203ENST00000378505 C6orf203Q9P0P8 240 aaPredicted RBP11.39□□□□□ -0.59
RPGR-203ENST00000378505 INVSQ9Y283 1065 aa11.39□□□□□ -0.59
RPGR-203ENST00000378505 HBS1LQ9Y450 684 aaKnown RBP11.39□□□□□ -0.59
RPGR-203ENST00000378505 SPACA6W5XKT8 324 aa11.39□□□□□ -0.59
RPGR-203ENST00000378505 FAM208AQ9UK61 1670 aaKnown RBP11.39□□□□□ -0.59
RPGR-203ENST00000378505 C5orf60A6NFR6 353 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms