RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 PTGESO14684 152 aa14.67□□□□□ -0.06
TCOF1-202ENST00000377797 SLC9A3R1O14745 358 aaPredicted RBP14.67□□□□□ -0.06
TCOF1-202ENST00000377797 CREB1P16220 341 aa14.67□□□□□ -0.06
TCOF1-202ENST00000377797 CLCN5P51795 746 aa14.67□□□□□ -0.06
TCOF1-202ENST00000377797 POLR2LP62875 67 aaKnown RBP14.67□□□□□ -0.06
TCOF1-202ENST00000377797 ZNF557Q8N988 423 aaPredicted RBP14.67□□□□□ -0.06
TCOF1-202ENST00000377797 RFWD2Q8NHY2 731 aa14.67□□□□□ -0.06
TCOF1-202ENST00000377797 CXorf38Q8TB03 319 aa14.67□□□□□ -0.06
TCOF1-202ENST00000377797 GRIN3AQ8TCU5 1115 aa14.67□□□□□ -0.06
TCOF1-202ENST00000377797 KCTD4Q8WVF5 259 aa14.67□□□□□ -0.06
TCOF1-202ENST00000377797 TEKT5Q96M29 485 aa14.67□□□□□ -0.06
TCOF1-202ENST00000377797 PAAF1Q9BRP4 392 aa14.67□□□□□ -0.06
TCOF1-202ENST00000377797 ACE2Q9BYF1 805 aaPredicted RBP14.67□□□□□ -0.06
TCOF1-202ENST00000377797 MRPL46Q9H2W6 279 aaKnown RBP14.67□□□□□ -0.06
TCOF1-202ENST00000377797 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.67□□□□□ -0.06
TCOF1-202ENST00000377797 BTN3A1O00481 513 aa14.67□□□□□ -0.06
TCOF1-202ENST00000377797 PRPF4O43172 522 aaKnown RBP eCLIP14.67□□□□□ -0.06
TCOF1-202ENST00000377797 CBX6O95503 412 aa14.67□□□□□ -0.06
TCOF1-202ENST00000377797 GUCA1CO95843 209 aa14.67□□□□□ -0.06
TCOF1-202ENST00000377797 ILF2Q12905 390 aaKnown RBP14.67□□□□□ -0.06
TCOF1-202ENST00000377797 UPP1Q16831 310 aa14.67□□□□□ -0.06
TCOF1-202ENST00000377797 CCDC142Q17RM4 750 aa14.67□□□□□ -0.06
TCOF1-202ENST00000377797 ANKS6Q68DC2 871 aa14.67□□□□□ -0.06
TCOF1-202ENST00000377797 ANKS1BQ7Z6G8 1248 aa14.67□□□□□ -0.06
TCOF1-202ENST00000377797 NAT8LQ8N9F0 302 aa14.67□□□□□ -0.06
TCOF1-202ENST00000377797 HAPLN3Q96S86 360 aa14.67□□□□□ -0.06
TCOF1-202ENST00000377797 EFCAB1Q9HAE3 211 aa14.67□□□□□ -0.06
TCOF1-202ENST00000377797 RABGEF1Q9UJ41 708 aa14.67□□□□□ -0.06
TCOF1-202ENST00000377797 RNASEH1O60930 286 aaKnown RBP14.67□□□□□ -0.06
TCOF1-202ENST00000377797 SLC11A1P49279 550 aa14.67□□□□□ -0.06
TCOF1-202ENST00000377797 DSC2Q02487 901 aa14.67□□□□□ -0.06
TCOF1-202ENST00000377797 ADGRD1Q6QNK2 874 aa14.67□□□□□ -0.06
TCOF1-202ENST00000377797 OR6K2Q8NGY2 324 aa14.67□□□□□ -0.06
TCOF1-202ENST00000377797 MECRQ9BV79 373 aa14.67□□□□□ -0.06
TCOF1-202ENST00000377797 SLC39A8Q9C0K1 460 aa14.67□□□□□ -0.06
TCOF1-202ENST00000377797 ALG9Q9H6U8 611 aa14.67□□□□□ -0.06
TCOF1-202ENST00000377797 CAB39LQ9H9S4 337 aa14.67□□□□□ -0.06
TCOF1-202ENST00000377797 TAGLN3Q9UI15 199 aa14.67□□□□□ -0.06
TCOF1-202ENST00000377797 HBS1LQ9Y450 684 aaKnown RBP14.67□□□□□ -0.06
TCOF1-202ENST00000377797 TCRBV7S3A2A0A539 114 aa14.66□□□□□ -0.06
TCOF1-202ENST00000377797 SP100P23497 879 aaPredicted RBP14.66□□□□□ -0.06
TCOF1-202ENST00000377797 CCND1P24385 295 aa14.66□□□□□ -0.06
TCOF1-202ENST00000377797 PTPN4P29074 926 aa14.66□□□□□ -0.06
TCOF1-202ENST00000377797 PBLDP30039 288 aaPredicted RBP14.66□□□□□ -0.06
TCOF1-202ENST00000377797 MAPK8P45983 427 aa14.66□□□□□ -0.06
TCOF1-202ENST00000377797 NME5P56597 212 aa14.66□□□□□ -0.06
TCOF1-202ENST00000377797 GNA12Q03113 381 aa14.66□□□□□ -0.06
TCOF1-202ENST00000377797 HNRNPDQ14103 355 aaKnown RBP14.66□□□□□ -0.06
TCOF1-202ENST00000377797 ZNF697Q5TEC3 545 aa14.66□□□□□ -0.06
TCOF1-202ENST00000377797 TLCD1Q96CP7 247 aa14.66□□□□□ -0.06
TCOF1-202ENST00000377797 PPP1R10Q96QC0 940 aaKnown RBP14.66□□□□□ -0.06
TCOF1-202ENST00000377797 SERPIND1P05546 499 aa14.66□□□□□ -0.06
TCOF1-202ENST00000377797 BTKQ06187 659 aa14.66□□□□□ -0.06
TCOF1-202ENST00000377797 SLC1A5Q15758 541 aa14.66□□□□□ -0.06
TCOF1-202ENST00000377797 PTPRNQ16849 979 aa14.66□□□□□ -0.06
TCOF1-202ENST00000377797 GALNTL6Q49A17 601 aa14.66□□□□□ -0.06
TCOF1-202ENST00000377797 LCA5Q86VQ0 697 aa14.66□□□□□ -0.06
TCOF1-202ENST00000377797 CACUL1Q86Y37 369 aa14.66□□□□□ -0.06
TCOF1-202ENST00000377797 PSMG2Q969U7 264 aa14.66□□□□□ -0.06
TCOF1-202ENST00000377797 HMCESQ96FZ2 354 aa14.66□□□□□ -0.06
TCOF1-202ENST00000377797 RHOJQ9H4E5 214 aa14.66□□□□□ -0.06
TCOF1-202ENST00000377797 POMKQ9H5K3 350 aa14.66□□□□□ -0.06
TCOF1-202ENST00000377797 ASB8Q9H765 288 aa14.66□□□□□ -0.06
TCOF1-202ENST00000377797 ATP13A3Q9H7F0 1226 aa14.66□□□□□ -0.06
TCOF1-202ENST00000377797 A0A087X1B8 175 aa14.66□□□□□ -0.06
TCOF1-202ENST00000377797 FAM237BA0A1B0GVD1 139 aa14.66□□□□□ -0.06
TCOF1-202ENST00000377797 C2P06681 752 aa14.66□□□□□ -0.06
TCOF1-202ENST00000377797 PDHA1P08559 390 aa14.66□□□□□ -0.06
TCOF1-202ENST00000377797 LTA4HP09960 611 aaKnown RBP14.66□□□□□ -0.06
TCOF1-202ENST00000377797 LPOP22079 712 aaPredicted RBP14.66□□□□□ -0.06
TCOF1-202ENST00000377797 RAB10P61026 200 aa14.66□□□□□ -0.06
TCOF1-202ENST00000377797 BOP1Q14137 746 aaKnown RBP14.66□□□□□ -0.06
TCOF1-202ENST00000377797 C2orf15Q8WU43 125 aaKnown RBP14.66□□□□□ -0.06
TCOF1-202ENST00000377797 OMDQ99983 421 aa14.66□□□□□ -0.06
TCOF1-202ENST00000377797 HAUS8Q9BT25 410 aa14.66□□□□□ -0.06
TCOF1-202ENST00000377797 SYT11Q9BT88 431 aa14.66□□□□□ -0.06
TCOF1-202ENST00000377797 MYLK2Q9H1R3 596 aa14.66□□□□□ -0.06
TCOF1-202ENST00000377797 NOD2Q9HC29 1040 aa14.66□□□□□ -0.06
TCOF1-202ENST00000377797 GID8Q9NWU2 228 aa14.66□□□□□ -0.06
TCOF1-202ENST00000377797 DNAJB4Q9UDY4 337 aa14.66□□□□□ -0.06
TCOF1-202ENST00000377797 GPR158Q5T848 1215 aa14.66□□□□□ -0.06
TCOF1-202ENST00000377797 USP45Q70EL2 814 aa14.66□□□□□ -0.06
TCOF1-202ENST00000377797 ARL14EPQ8N8R7 260 aaPredicted RBP14.66□□□□□ -0.06
TCOF1-202ENST00000377797 TMEM237Q96Q45 408 aa14.66□□□□□ -0.06
TCOF1-202ENST00000377797 SLC25A51Q9H1U9 297 aa14.66□□□□□ -0.06
TCOF1-202ENST00000377797 C12orf65Q9H3J6 166 aaKnown RBP14.66□□□□□ -0.06
TCOF1-202ENST00000377797 CTPS1P17812 591 aa14.65□□□□□ -0.06
TCOF1-202ENST00000377797 TFE3P19532 575 aaPredicted RBP14.65□□□□□ -0.06
TCOF1-202ENST00000377797 IL10P22301 178 aa14.65□□□□□ -0.06
TCOF1-202ENST00000377797 SEMA5AQ13591 1074 aa14.65□□□□□ -0.06
TCOF1-202ENST00000377797 ERAP2Q6P179 960 aa14.65□□□□□ -0.06
TCOF1-202ENST00000377797 TRMT10BQ6PF06 316 aaKnown RBP14.65□□□□□ -0.06
TCOF1-202ENST00000377797 RHBDF2Q6PJF5 856 aa14.65□□□□□ -0.06
TCOF1-202ENST00000377797 RPAINQ86UA6 219 aa14.65□□□□□ -0.06
TCOF1-202ENST00000377797 SPATA6LQ8N4H0 392 aa14.65□□□□□ -0.06
TCOF1-202ENST00000377797 TMEM247A6NEH6 219 aa14.65□□□□□ -0.06
TCOF1-202ENST00000377797 BEST1O76090 585 aa14.65□□□□□ -0.06
TCOF1-202ENST00000377797 TFEBP19484 476 aa14.65□□□□□ -0.06
TCOF1-202ENST00000377797 RARS2Q5T160 578 aaKnown RBP14.65□□□□□ -0.06
TCOF1-202ENST00000377797 STK40Q8N2I9 435 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms