RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 INSIG1O15503 277 aa21.6■■□□□ 1.05
CBWD3-202ENST00000377342 NEBLO76041 1014 aa21.6■■□□□ 1.05
CBWD3-202ENST00000377342 SLU7O95391 586 aaKnown RBP21.6■■□□□ 1.05
CBWD3-202ENST00000377342 WASP42768 502 aa21.6■■□□□ 1.05
CBWD3-202ENST00000377342 MRPS21P82921 87 aaKnown RBP21.6■■□□□ 1.05
CBWD3-202ENST00000377342 UBXN2BQ14CS0 331 aa21.6■■□□□ 1.05
CBWD3-202ENST00000377342 SYDE1Q6ZW31 735 aaPredicted RBP21.6■■□□□ 1.05
CBWD3-202ENST00000377342 OR6K2Q8NGY2 324 aa21.6■■□□□ 1.05
CBWD3-202ENST00000377342 CCDC26Q8TAB7 109 aa21.6■■□□□ 1.05
CBWD3-202ENST00000377342 IMP4Q96G21 291 aaKnown RBP21.6■■□□□ 1.05
CBWD3-202ENST00000377342 GDAP1L1Q96MZ0 367 aa21.6■■□□□ 1.05
CBWD3-202ENST00000377342 GABRG3Q99928 467 aa21.6■■□□□ 1.05
CBWD3-202ENST00000377342 SEMA3CQ99985 751 aa21.6■■□□□ 1.05
CBWD3-202ENST00000377342 PAK5Q9P286 719 aa21.6■■□□□ 1.05
CBWD3-202ENST00000377342 RSPH14Q9UHP6 348 aa21.6■■□□□ 1.05
CBWD3-202ENST00000377342 MRPS17Q9Y2R5 130 aaKnown RBP21.6■■□□□ 1.05
CBWD3-202ENST00000377342 FAM187AA6NFU0 413 aa21.59■■□□□ 1.05
CBWD3-202ENST00000377342 DCXO43602 365 aa21.59■■□□□ 1.05
CBWD3-202ENST00000377342 SIGLEC14Q08ET2 396 aa21.59■■□□□ 1.05
CBWD3-202ENST00000377342 NSUN2Q08J23 767 aaKnown RBP eCLIP21.59■■□□□ 1.05
CBWD3-202ENST00000377342 ITPRIPL1Q6GPH6 555 aa21.59■■□□□ 1.05
CBWD3-202ENST00000377342 DPY19L3Q6ZPD9 716 aa21.59■■□□□ 1.05
CBWD3-202ENST00000377342 PRPF39Q86UA1 669 aaKnown RBP21.59■■□□□ 1.05
CBWD3-202ENST00000377342 RPLP0P6Q8NHW5 317 aa21.59■■□□□ 1.05
CBWD3-202ENST00000377342 EDAQ92838 391 aa21.59■■□□□ 1.05
CBWD3-202ENST00000377342 TADA1Q96BN2 335 aa21.59■■□□□ 1.05
CBWD3-202ENST00000377342 OXNAD1Q96HP4 312 aaPredicted RBP21.59■■□□□ 1.05
CBWD3-202ENST00000377342 FCRL5Q96RD9 977 aa21.59■■□□□ 1.05
CBWD3-202ENST00000377342 NUDCD1Q96RS6 583 aa21.59■■□□□ 1.05
CBWD3-202ENST00000377342 MLPHQ9BV36 600 aaPredicted RBP21.59■■□□□ 1.05
CBWD3-202ENST00000377342 SLC25A51Q9H1U9 297 aa21.59■■□□□ 1.05
CBWD3-202ENST00000377342 EDDM13A0A1B0GTR0 161 aa21.58■■□□□ 1.05
CBWD3-202ENST00000377342 KLF8O95600 359 aaPredicted RBP21.58■■□□□ 1.05
CBWD3-202ENST00000377342 IGSF6O95976 241 aa21.58■■□□□ 1.05
CBWD3-202ENST00000377342 IVDP26440 423 aa21.58■■□□□ 1.05
CBWD3-202ENST00000377342 CCNHP51946 323 aaPredicted RBP21.58■■□□□ 1.05
CBWD3-202ENST00000377342 GPS1Q13098 491 aa21.58■■□□□ 1.05
CBWD3-202ENST00000377342 CARD16Q5EG05 197 aa21.58■■□□□ 1.05
CBWD3-202ENST00000377342 C9orf64Q5T6V5 341 aa21.58■■□□□ 1.05
CBWD3-202ENST00000377342 MAATS1Q7Z4T9 603 aa21.58■■□□□ 1.05
CBWD3-202ENST00000377342 KLHDC8BQ8IXV7 354 aa21.58■■□□□ 1.05
CBWD3-202ENST00000377342 CHST14Q8NCH0 376 aa21.58■■□□□ 1.05
CBWD3-202ENST00000377342 PJA1Q8NG27 643 aa21.58■■□□□ 1.05
CBWD3-202ENST00000377342 SPATA22Q8NHS9 363 aa21.58■■□□□ 1.05
CBWD3-202ENST00000377342 NOD2Q9HC29 1040 aa21.58■■□□□ 1.05
CBWD3-202ENST00000377342 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP21.57■■□□□ 1.04
CBWD3-202ENST00000377342 BNIP3LO60238 219 aa21.57■■□□□ 1.04
CBWD3-202ENST00000377342 SIN3BO75182 1162 aa21.57■■□□□ 1.04
CBWD3-202ENST00000377342 NTSR1P30989 418 aa21.57■■□□□ 1.04
CBWD3-202ENST00000377342 GKP32189 559 aa21.57■■□□□ 1.04
CBWD3-202ENST00000377342 CSNK1DP48730 415 aa21.57■■□□□ 1.04
CBWD3-202ENST00000377342 SCNN1BP51168 640 aa21.57■■□□□ 1.04
CBWD3-202ENST00000377342 SNRPD1P62314 119 aaKnown RBP21.57■■□□□ 1.04
CBWD3-202ENST00000377342 ITKQ08881 620 aa21.57■■□□□ 1.04
CBWD3-202ENST00000377342 PLPP6Q8IY26 295 aa21.57■■□□□ 1.04
CBWD3-202ENST00000377342 TXNDC5Q8NBS9 432 aaKnown RBP21.57■■□□□ 1.04
CBWD3-202ENST00000377342 CD248Q9HCU0 757 aa21.57■■□□□ 1.04
CBWD3-202ENST00000377342 ASIC3Q9UHC3 531 aa21.57■■□□□ 1.04
CBWD3-202ENST00000377342 EVLQ9UI08 416 aaPredicted RBP21.57■■□□□ 1.04
CBWD3-202ENST00000377342 SLC8A2Q9UPR5 921 aa21.57■■□□□ 1.04
CBWD3-202ENST00000377342 FAM170BA6NMN3 283 aa21.56■■□□□ 1.04
CBWD3-202ENST00000377342 MT-CYBP00156 380 aaPredicted RBP21.56■■□□□ 1.04
CBWD3-202ENST00000377342 PDGFBP01127 241 aaPredicted RBP21.56■■□□□ 1.04
CBWD3-202ENST00000377342 EPHX1P07099 455 aa21.56■■□□□ 1.04
CBWD3-202ENST00000377342 ACTN2P35609 894 aa21.56■■□□□ 1.04
CBWD3-202ENST00000377342 CD86P42081 329 aa21.56■■□□□ 1.04
CBWD3-202ENST00000377342 SKOR1P84550 965 aa21.56■■□□□ 1.04
CBWD3-202ENST00000377342 SLC7A5Q01650 507 aa21.56■■□□□ 1.04
CBWD3-202ENST00000377342 LRRC32Q14392 662 aa21.56■■□□□ 1.04
CBWD3-202ENST00000377342 GAS6Q14393 721 aa21.56■■□□□ 1.04
CBWD3-202ENST00000377342 PARP6Q2NL67 630 aa21.56■■□□□ 1.04
CBWD3-202ENST00000377342 TEX35Q5T0J7 233 aa21.56■■□□□ 1.04
CBWD3-202ENST00000377342 CWF19L1Q69YN2 538 aaKnown RBP21.56■■□□□ 1.04
CBWD3-202ENST00000377342 NCEH1Q6PIU2 408 aa21.56■■□□□ 1.04
CBWD3-202ENST00000377342 SRLQ86TD4 932 aa21.56■■□□□ 1.04
CBWD3-202ENST00000377342 RBM15Q96T37 977 aaKnown RBP eCLIP21.56■■□□□ 1.04
CBWD3-202ENST00000377342 LMAN1LQ9HAT1 526 aa21.56■■□□□ 1.04
CBWD3-202ENST00000377342 ETNK1Q9HBU6 452 aa21.56■■□□□ 1.04
CBWD3-202ENST00000377342 SCUBE2Q9NQ36 999 aa21.56■■□□□ 1.04
CBWD3-202ENST00000377342 PRSS16Q9NQE7 514 aa21.56■■□□□ 1.04
CBWD3-202ENST00000377342 RAB6BQ9NRW1 208 aa21.56■■□□□ 1.04
CBWD3-202ENST00000377342 WASF2Q9Y6W5 498 aa21.56■■□□□ 1.04
CBWD3-202ENST00000377342 MYLKQ15746 1914 aa21.56■■□□□ 1.04
CBWD3-202ENST00000377342 BHMG1C9JSJ3 638 aaPredicted RBP21.56■■□□□ 1.04
CBWD3-202ENST00000377342 CTSLP07711 333 aa21.56■■□□□ 1.04
CBWD3-202ENST00000377342 COL9A1P20849 921 aa21.56■■□□□ 1.04
CBWD3-202ENST00000377342 AP1S1P61966 158 aa21.56■■□□□ 1.04
CBWD3-202ENST00000377342 CAMK2GQ13555 558 aaPredicted RBP21.56■■□□□ 1.04
CBWD3-202ENST00000377342 SEMA5AQ13591 1074 aa21.56■■□□□ 1.04
CBWD3-202ENST00000377342 E2F5Q15329 346 aa21.56■■□□□ 1.04
CBWD3-202ENST00000377342 KIAA1211LQ6NV74 962 aa21.56■■□□□ 1.04
CBWD3-202ENST00000377342 TRMT11Q7Z4G4 463 aaKnown RBP21.56■■□□□ 1.04
CBWD3-202ENST00000377342 SYNPOQ8N3V7 929 aa21.56■■□□□ 1.04
CBWD3-202ENST00000377342 ERLEC1Q96DZ1 483 aa21.56■■□□□ 1.04
CBWD3-202ENST00000377342 NELL2Q99435 816 aa21.56■■□□□ 1.04
CBWD3-202ENST00000377342 ERP44Q9BS26 406 aa21.56■■□□□ 1.04
CBWD3-202ENST00000377342 HAUS2Q9NVX0 235 aa21.56■■□□□ 1.04
CBWD3-202ENST00000377342 POLR3BQ9NW08 1133 aaPredicted RBP21.56■■□□□ 1.04
CBWD3-202ENST00000377342 UBP1Q9NZI7 540 aa21.56■■□□□ 1.04
CBWD3-202ENST00000377342 DMGDHQ9UI17 866 aaKnown RBP21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms