RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 STARD7Q9NQZ5 370 aa14.13□□□□□ -0.15
HMGCL-203ENST00000374490 ABCC13Q9NSE7 274 aa14.13□□□□□ -0.15
HMGCL-203ENST00000374490 TRMT13Q9NUP7 481 aaKnown RBP14.13□□□□□ -0.15
HMGCL-203ENST00000374490 TMEM30AQ9NV96 361 aa14.13□□□□□ -0.15
HMGCL-203ENST00000374490 MIOSQ9NXC5 875 aa14.13□□□□□ -0.15
HMGCL-203ENST00000374490 SNX10Q9Y5X0 201 aa14.13□□□□□ -0.15
HMGCL-203ENST00000374490 A0A087X1B8 175 aa14.12□□□□□ -0.15
HMGCL-203ENST00000374490 A0A1W2PQ45 241 aaPredicted RBP14.12□□□□□ -0.15
HMGCL-203ENST00000374490 A0A1W2PQY0 241 aa14.12□□□□□ -0.15
HMGCL-203ENST00000374490 CASTOR2A6NHX0 329 aa14.12□□□□□ -0.15
HMGCL-203ENST00000374490 MEIS3P2A8K0S8 358 aa14.12□□□□□ -0.15
HMGCL-203ENST00000374490 M0QZQ0 153 aa14.12□□□□□ -0.15
HMGCL-203ENST00000374490 DFFAO00273 331 aa14.12□□□□□ -0.15
HMGCL-203ENST00000374490 MATN2O00339 956 aa14.12□□□□□ -0.15
HMGCL-203ENST00000374490 AMHP03971 560 aa14.12□□□□□ -0.15
HMGCL-203ENST00000374490 TYMPP19971 482 aa14.12□□□□□ -0.15
HMGCL-203ENST00000374490 ITGAXP20702 1163 aa14.12□□□□□ -0.15
HMGCL-203ENST00000374490 CCR1P32246 355 aa14.12□□□□□ -0.15
HMGCL-203ENST00000374490 IRF9Q00978 393 aa14.12□□□□□ -0.15
HMGCL-203ENST00000374490 TSPY1Q01534 308 aa14.12□□□□□ -0.15
HMGCL-203ENST00000374490 GRIK3Q13003 919 aa14.12□□□□□ -0.15
HMGCL-203ENST00000374490 EIF4EBP2Q13542 120 aaPredicted RBP14.12□□□□□ -0.15
HMGCL-203ENST00000374490 PPP2R5DQ14738 602 aa14.12□□□□□ -0.15
HMGCL-203ENST00000374490 MANEALQ5VSG8 457 aa14.12□□□□□ -0.15
HMGCL-203ENST00000374490 SLC39A5Q6ZMH5 540 aa14.12□□□□□ -0.15
HMGCL-203ENST00000374490 CPSF7Q8N684 471 aaKnown RBP14.12□□□□□ -0.15
HMGCL-203ENST00000374490 POU5F2Q8N7G0 328 aa14.12□□□□□ -0.15
HMGCL-203ENST00000374490 CNTD1Q8N815 330 aa14.12□□□□□ -0.15
HMGCL-203ENST00000374490 AZIN2Q96A70 460 aa14.12□□□□□ -0.15
HMGCL-203ENST00000374490 CELF6Q96J87 481 aaKnown RBP14.12□□□□□ -0.15
HMGCL-203ENST00000374490 SCYL1Q96KG9 808 aa14.12□□□□□ -0.15
HMGCL-203ENST00000374490 ECSITQ9BQ95 431 aa14.12□□□□□ -0.15
HMGCL-203ENST00000374490 APOL2Q9BQE5 337 aa14.12□□□□□ -0.15
HMGCL-203ENST00000374490 CAB39LQ9H9S4 337 aa14.12□□□□□ -0.15
HMGCL-203ENST00000374490 TBC1D13Q9NVG8 400 aa14.12□□□□□ -0.15
HMGCL-203ENST00000374490 BCAP29Q9UHQ4 241 aa14.12□□□□□ -0.15
HMGCL-203ENST00000374490 CDH22Q9UJ99 828 aa14.12□□□□□ -0.15
HMGCL-203ENST00000374490 ACOT9Q9Y305 439 aa14.12□□□□□ -0.15
HMGCL-203ENST00000374490 TCAF1Q9Y4C2 921 aa14.12□□□□□ -0.15
HMGCL-203ENST00000374490 NPHS1O60500 1241 aa14.12□□□□□ -0.15
HMGCL-203ENST00000374490 BAG2O95816 211 aa14.12□□□□□ -0.15
HMGCL-203ENST00000374490 TPH1P17752 444 aa14.12□□□□□ -0.15
HMGCL-203ENST00000374490 BDNFP23560 247 aa14.12□□□□□ -0.15
HMGCL-203ENST00000374490 CD52P31358 61 aa14.12□□□□□ -0.15
HMGCL-203ENST00000374490 RABGGTBP53611 331 aa14.12□□□□□ -0.15
HMGCL-203ENST00000374490 RAB10P61026 200 aa14.12□□□□□ -0.15
HMGCL-203ENST00000374490 TBL3Q12788 808 aaKnown RBP14.12□□□□□ -0.15
HMGCL-203ENST00000374490 USP4Q13107 963 aa14.12□□□□□ -0.15
HMGCL-203ENST00000374490 DLG2Q15700 870 aa14.12□□□□□ -0.15
HMGCL-203ENST00000374490 SMAD1Q15797 465 aaKnown RBP14.12□□□□□ -0.15
HMGCL-203ENST00000374490 ZNF697Q5TEC3 545 aa14.12□□□□□ -0.15
HMGCL-203ENST00000374490 BTBD8Q5XKL5 378 aa14.12□□□□□ -0.15
HMGCL-203ENST00000374490 KIAA0930Q6ICG6 404 aaPredicted RBP14.12□□□□□ -0.15
HMGCL-203ENST00000374490 LRRC8EQ6NSJ5 796 aa14.12□□□□□ -0.15
HMGCL-203ENST00000374490 NAPRTQ6XQN6 538 aa14.12□□□□□ -0.15
HMGCL-203ENST00000374490 ATG14Q6ZNE5 492 aa14.12□□□□□ -0.15
HMGCL-203ENST00000374490 KIAA0408Q6ZU52 694 aa14.12□□□□□ -0.15
HMGCL-203ENST00000374490 DHDDSQ86SQ9 333 aa14.12□□□□□ -0.15
HMGCL-203ENST00000374490 ARHGAP12Q8IWW6 846 aa14.12□□□□□ -0.15
HMGCL-203ENST00000374490 FBXW8Q8N3Y1 598 aa14.12□□□□□ -0.15
HMGCL-203ENST00000374490 ZDHHC7Q9NXF8 308 aa14.12□□□□□ -0.15
HMGCL-203ENST00000374490 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.12□□□□□ -0.15
HMGCL-203ENST00000374490 PDP2Q9P2J9 529 aa14.12□□□□□ -0.15
HMGCL-203ENST00000374490 PADI3Q9ULW8 664 aa14.12□□□□□ -0.15
HMGCL-203ENST00000374490 NEU3Q9UQ49 428 aa14.12□□□□□ -0.15
HMGCL-203ENST00000374490 WASH4PA8MWX3 477 aa14.11□□□□□ -0.15
HMGCL-203ENST00000374490 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.11□□□□□ -0.15
HMGCL-203ENST00000374490 DCXO43602 365 aa14.11□□□□□ -0.15
HMGCL-203ENST00000374490 NEBLO76041 1014 aa14.11□□□□□ -0.15
HMGCL-203ENST00000374490 LINGO3P0C6S8 592 aa14.11□□□□□ -0.15
HMGCL-203ENST00000374490 SLC35E2BP0CK96 405 aa14.11□□□□□ -0.15
HMGCL-203ENST00000374490 STMN1P16949 149 aa14.11□□□□□ -0.15
HMGCL-203ENST00000374490 PAX7P23759 505 aa14.11□□□□□ -0.15
HMGCL-203ENST00000374490 IGFBP6P24592 240 aaPredicted RBP14.11□□□□□ -0.15
HMGCL-203ENST00000374490 CDC25CP30307 473 aa14.11□□□□□ -0.15
HMGCL-203ENST00000374490 GRIA4P48058 902 aa14.11□□□□□ -0.15
HMGCL-203ENST00000374490 TUSC3Q13454 348 aa14.11□□□□□ -0.15
HMGCL-203ENST00000374490 TRIM60Q495X7 471 aa14.11□□□□□ -0.15
HMGCL-203ENST00000374490 SLC9B1Q4ZJI4 515 aa14.11□□□□□ -0.15
HMGCL-203ENST00000374490 FAM26DQ5JW98 314 aa14.11□□□□□ -0.15
HMGCL-203ENST00000374490 VWA5B1Q5TIE3 1220 aa14.11□□□□□ -0.15
HMGCL-203ENST00000374490 AFMIDQ63HM1 303 aa14.11□□□□□ -0.15
HMGCL-203ENST00000374490 IZUMO2Q6UXV1 221 aa14.11□□□□□ -0.15
HMGCL-203ENST00000374490 OTOP3Q7RTS5 596 aa14.11□□□□□ -0.15
HMGCL-203ENST00000374490 DEFB107AQ8IZN7 70 aa14.11□□□□□ -0.15
HMGCL-203ENST00000374490 RP9Q8TA86 221 aaKnown RBP14.11□□□□□ -0.15
HMGCL-203ENST00000374490 CALML6Q8TD86 181 aa14.11□□□□□ -0.15
HMGCL-203ENST00000374490 USP33Q8TEY7 942 aa14.11□□□□□ -0.15
HMGCL-203ENST00000374490 LPPQ93052 612 aa14.11□□□□□ -0.15
HMGCL-203ENST00000374490 FATE1Q969F0 183 aa14.11□□□□□ -0.15
HMGCL-203ENST00000374490 PPP2R3CQ969Q6 453 aa14.11□□□□□ -0.15
HMGCL-203ENST00000374490 TTC1Q99614 292 aa14.11□□□□□ -0.15
HMGCL-203ENST00000374490 FICDQ9BVA6 458 aa14.11□□□□□ -0.15
HMGCL-203ENST00000374490 AGO3Q9H9G7 860 aaKnown RBP14.11□□□□□ -0.15
HMGCL-203ENST00000374490 CACNG4Q9UBN1 327 aa14.11□□□□□ -0.15
HMGCL-203ENST00000374490 RUVBL2Q9Y230 463 aaKnown RBP14.11□□□□□ -0.15
HMGCL-203ENST00000374490 CDYLQ9Y232 598 aa14.11□□□□□ -0.15
HMGCL-203ENST00000374490 SSX2IPQ9Y2D8 614 aa14.11□□□□□ -0.15
HMGCL-203ENST00000374490 SQORQ9Y6N5 450 aa14.11□□□□□ -0.15
HMGCL-203ENST00000374490 FAM95CA0A1B0GW59 222 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms