RNA–Protein interactions for RNA: ENST00000374043.6

PACSIN1-202, Transcript of protein kinase C and casein kinase substrate in neurons 1, humanhuman

TSL 1 (best) BASIC

Gene PACSIN1, Length 4,229 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1-202ENST00000374043 ATP11BQ9Y2G3 1177 aa11.95□□□□□ -0.5
PACSIN1-202ENST00000374043 RNF103-CHMP3A0A140T963 221 aa11.95□□□□□ -0.5
PACSIN1-202ENST00000374043 SH3BP5O60239 455 aa11.95□□□□□ -0.5
PACSIN1-202ENST00000374043 GABBR2O75899 941 aa11.95□□□□□ -0.5
PACSIN1-202ENST00000374043 TRIM16O95361 564 aa11.95□□□□□ -0.5
PACSIN1-202ENST00000374043 PCBP1Q15365 356 aaKnown RBP eCLIP11.95□□□□□ -0.51e-6■■■□□ 16.1
PACSIN1-202ENST00000374043 PTRHD1Q6GMV3 140 aaKnown RBP11.95□□□□□ -0.5
PACSIN1-202ENST00000374043 MRNIPQ6NTE8 343 aa11.95□□□□□ -0.5
PACSIN1-202ENST00000374043 LRRTM3Q86VH5 581 aa11.95□□□□□ -0.5
PACSIN1-202ENST00000374043 ULK2Q8IYT8 1036 aa11.95□□□□□ -0.5
PACSIN1-202ENST00000374043 FAM156AQ8NDB6 213 aa11.95□□□□□ -0.5
PACSIN1-202ENST00000374043 ULK4Q96C45 1275 aa11.95□□□□□ -0.5
PACSIN1-202ENST00000374043 TSPAN17Q96FV3 270 aa11.95□□□□□ -0.5
PACSIN1-202ENST00000374043 GBA3Q9H227 469 aa11.95□□□□□ -0.5
PACSIN1-202ENST00000374043 RNF112Q9ULX5 631 aa11.95□□□□□ -0.5
PACSIN1-202ENST00000374043 TRIM17Q9Y577 477 aa11.95□□□□□ -0.5
PACSIN1-202ENST00000374043 TMEM233B4DJY2 109 aa11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 AP3B1O00203 1094 aa11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 NR5A2O00482 541 aa11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 CNTN5O94779 1100 aa11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 MPOP05164 745 aa11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 TSHRP16473 764 aa11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 TAS2R39P59534 338 aa11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 SLC34A1Q06495 639 aa11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 VARS2Q5ST30 1063 aaKnown RBP11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 CNSTQ6PJW8 725 aa11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 WDR60Q8WVS4 1066 aa11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 VAT1Q99536 393 aa11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 ACBD6Q9BR61 282 aa11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 ZYG11BQ9C0D3 744 aa11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 ALDOAP04075 364 aaKnown RBP11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 PAX7P23759 505 aa11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 SLC10A7Q0GE19 358 aa11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 TTC9BQ8N6N2 239 aa11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 CXorf38Q8TB03 319 aa11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 KHSRPQ92945 711 aaKnown RBP eCLIP11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 EME1Q96AY2 570 aa11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 HBEGFQ99075 208 aa11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 RBBP8Q99708 897 aa11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 EML4Q9HC35 981 aaKnown RBP11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 SEMA4BQ9NPR2 832 aaPredicted RBP11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 MTMR10Q9NXD2 777 aa11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 NSMCE4AQ9NXX6 385 aa11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 KCTD3Q9Y597 815 aa11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 SSC5DA1L4H1 1573 aa11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 ATXN2Q99700 1313 aaKnown RBP11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 POLR2AP24928 1970 aaKnown RBP11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 FAM159BA6NKW6 160 aa11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 E7ESA3 106 aa11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 ANGPT2O15123 496 aa11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 AKAP10O43572 662 aa11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 SIN3BO75182 1162 aa11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 FGFR3P22607 806 aa11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 RPL14P50914 215 aaKnown RBP11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 PKN3Q6P5Z2 889 aa11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 RELL1Q8IUW5 271 aa11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 LRRC43Q8N309 656 aa11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 RCN3Q96D15 328 aa11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 TSC22D3Q99576 134 aa11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 MID1IP1Q9NPA3 183 aa11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 ENTPD7Q9NQZ7 604 aa11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 GNEQ9Y223 722 aaKnown RBP11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 BTRCQ9Y297 605 aa11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 HEATR9A2RTY3 570 aa11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 THRAP10827 490 aa11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 RAG1P15918 1043 aa11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 CTPS1P17812 591 aa11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 ACSBG2Q5FVE4 666 aa11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 WASHC2DQ5SRD0 308 aa11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 TMCO4Q5TGY1 634 aa11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 KIAA0319Q5VV43 1072 aa11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 IYDQ6PHW0 289 aa11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 TREML1Q86YW5 311 aa11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 UPF3AQ9H1J1 476 aaKnown RBP11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 SEMA6AQ9H2E6 1030 aa11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 HMX1Q9NP08 348 aaPredicted RBP11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 SCUBE2Q9NQ36 999 aa11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 GKN1Q9NS71 199 aa11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 TBC1D13Q9NVG8 400 aa11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 TRPM5Q9NZQ8 1165 aa11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 PCDHGC4Q9Y5F7 938 aa11.94□□□□□ -0.5
PACSIN1-202ENST00000374043 MCM3APO60318 1980 aa11.93□□□□□ -0.5
PACSIN1-202ENST00000374043 HLA-DQB2P05538 268 aa11.93□□□□□ -0.5
PACSIN1-202ENST00000374043 RAB10P61026 200 aa11.93□□□□□ -0.5
PACSIN1-202ENST00000374043 SLC20A2Q08357 652 aa11.93□□□□□ -0.5
PACSIN1-202ENST00000374043 PRKAA1Q13131 559 aa11.93□□□□□ -0.5
PACSIN1-202ENST00000374043 MED21Q13503 144 aa11.93□□□□□ -0.5
PACSIN1-202ENST00000374043 CLEC6AQ6EIG7 209 aa11.93□□□□□ -0.5
PACSIN1-202ENST00000374043 SLC24A5Q71RS6 500 aa11.93□□□□□ -0.5
PACSIN1-202ENST00000374043 MON1AQ86VX9 555 aa11.93□□□□□ -0.5
PACSIN1-202ENST00000374043 IFNLR1Q8IU57 520 aaPredicted RBP11.93□□□□□ -0.5
PACSIN1-202ENST00000374043 FSTL5Q8N475 847 aaPredicted RBP11.93□□□□□ -0.5
PACSIN1-202ENST00000374043 NPAS2Q99743 824 aa11.93□□□□□ -0.5
PACSIN1-202ENST00000374043 GJD2Q9UKL4 321 aa11.93□□□□□ -0.5
PACSIN1-202ENST00000374043 SDK1Q7Z5N4 2213 aa11.93□□□□□ -0.5
PACSIN1-202ENST00000374043 BAIAP3O94812 1187 aa11.93□□□□□ -0.5
PACSIN1-202ENST00000374043 LIMK2P53671 638 aa11.93□□□□□ -0.5
PACSIN1-202ENST00000374043 MOGSQ13724 837 aa11.93□□□□□ -0.5
PACSIN1-202ENST00000374043 GPR158Q5T848 1215 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms