RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 IRAK4Q9NWZ3 460 aa13.36□□□□□ -0.27
NCDN-203ENST00000373253 VPS28Q9UK41 221 aa13.36□□□□□ -0.27
NCDN-203ENST00000373253 TMEM88BA6NKF7 163 aa13.36□□□□□ -0.27
NCDN-203ENST00000373253 SUPT3HB4E1H0 165 aa13.36□□□□□ -0.27
NCDN-203ENST00000373253 SUPT3HO75486 399 aa13.36□□□□□ -0.27
NCDN-203ENST00000373253 NDUFS3O75489 264 aa13.36□□□□□ -0.27
NCDN-203ENST00000373253 CD68P34810 354 aaPredicted RBP13.36□□□□□ -0.27
NCDN-203ENST00000373253 PCBP1Q15365 356 aaKnown RBP eCLIP13.36□□□□□ -0.272e-6■■■■■ 36.4
NCDN-203ENST00000373253 RBM20Q5T481 1227 aaKnown RBP13.36□□□□□ -0.27
NCDN-203ENST00000373253 ARMC3Q5W041 872 aa13.36□□□□□ -0.27
NCDN-203ENST00000373253 GABPB2Q8TAK5 448 aaPredicted RBP13.36□□□□□ -0.27
NCDN-203ENST00000373253 DDX50Q9BQ39 737 aaKnown RBP13.36□□□□□ -0.27
NCDN-203ENST00000373253 PHACTR1Q9C0D0 580 aa13.36□□□□□ -0.27
NCDN-203ENST00000373253 GBA3Q9H227 469 aa13.36□□□□□ -0.27
NCDN-203ENST00000373253 POMKQ9H5K3 350 aa13.36□□□□□ -0.27
NCDN-203ENST00000373253 HACD3Q9P035 362 aa13.36□□□□□ -0.27
NCDN-203ENST00000373253 STOML1Q9UBI4 398 aa13.36□□□□□ -0.27
NCDN-203ENST00000373253 ADAM28Q9UKQ2 775 aa13.36□□□□□ -0.27
NCDN-203ENST00000373253 TRHDEQ9UKU6 1024 aa13.36□□□□□ -0.27
NCDN-203ENST00000373253 MAP3K7O43318 606 aa13.35□□□□□ -0.27
NCDN-203ENST00000373253 RHOBTB1O94844 696 aa13.35□□□□□ -0.27
NCDN-203ENST00000373253 AHSGP02765 367 aa13.35□□□□□ -0.27
NCDN-203ENST00000373253 ALDH1A3P47895 512 aa13.35□□□□□ -0.27
NCDN-203ENST00000373253 TRIP10Q15642 601 aa13.35□□□□□ -0.27
NCDN-203ENST00000373253 ZNF598Q86UK7 904 aaKnown RBP13.35□□□□□ -0.27
NCDN-203ENST00000373253 MON1AQ86VX9 555 aa13.35□□□□□ -0.27
NCDN-203ENST00000373253 CACUL1Q86Y37 369 aa13.35□□□□□ -0.27
NCDN-203ENST00000373253 WDR60Q8WVS4 1066 aa13.35□□□□□ -0.27
NCDN-203ENST00000373253 APOL5Q9BWW9 433 aa13.35□□□□□ -0.27
NCDN-203ENST00000373253 GATA5Q9BWX5 397 aaPredicted RBP13.35□□□□□ -0.27
NCDN-203ENST00000373253 WASF2Q9Y6W5 498 aa13.35□□□□□ -0.27
NCDN-203ENST00000373253 A0A0D9SEW6 157 aa13.35□□□□□ -0.27
NCDN-203ENST00000373253 FAM159BA6NKW6 160 aa13.35□□□□□ -0.27
NCDN-203ENST00000373253 STAU1O95793 577 aaKnown RBP13.35□□□□□ -0.27
NCDN-203ENST00000373253 CYBAP13498 195 aa13.35□□□□□ -0.27
NCDN-203ENST00000373253 CRHR1P34998 444 aa13.35□□□□□ -0.27
NCDN-203ENST00000373253 PRKD1Q15139 912 aaPredicted RBP13.35□□□□□ -0.27
NCDN-203ENST00000373253 ARL13AQ5H913 290 aaPredicted RBP13.35□□□□□ -0.27
NCDN-203ENST00000373253 LRRC73Q5JTD7 316 aa13.35□□□□□ -0.27
NCDN-203ENST00000373253 SEL1L3Q68CR1 1132 aa13.35□□□□□ -0.27
NCDN-203ENST00000373253 FBXL22Q6P050 247 aa13.35□□□□□ -0.27
NCDN-203ENST00000373253 PIM3Q86V86 326 aa13.35□□□□□ -0.27
NCDN-203ENST00000373253 RELL1Q8IUW5 271 aa13.35□□□□□ -0.27
NCDN-203ENST00000373253 DDI1Q8WTU0 396 aa13.35□□□□□ -0.27
NCDN-203ENST00000373253 FBXO44Q9H4M3 255 aa13.35□□□□□ -0.27
NCDN-203ENST00000373253 PFDN4Q9NQP4 134 aa13.35□□□□□ -0.27
NCDN-203ENST00000373253 HAS3O00219 553 aa13.35□□□□□ -0.27
NCDN-203ENST00000373253 DCLK1O15075 740 aa13.35□□□□□ -0.27
NCDN-203ENST00000373253 GSC2O15499 205 aa13.35□□□□□ -0.27
NCDN-203ENST00000373253 PRSS56P0CW18 603 aa13.35□□□□□ -0.27
NCDN-203ENST00000373253 SERPINH1P50454 418 aaKnown RBP13.35□□□□□ -0.27
NCDN-203ENST00000373253 PTPRRQ15256 657 aa13.35□□□□□ -0.27
NCDN-203ENST00000373253 ZYG11BQ9C0D3 744 aa13.35□□□□□ -0.27
NCDN-203ENST00000373253 RGS18Q9NS28 235 aa13.35□□□□□ -0.27
NCDN-203ENST00000373253 ARL5AQ9Y689 179 aa13.35□□□□□ -0.27
NCDN-203ENST00000373253 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.34□□□□□ -0.27
NCDN-203ENST00000373253 KCNU1A8MYU2 1149 aa13.34□□□□□ -0.27
NCDN-203ENST00000373253 GUCA1CO95843 209 aa13.34□□□□□ -0.27
NCDN-203ENST00000373253 ARSAP15289 507 aa13.34□□□□□ -0.27
NCDN-203ENST00000373253 HDCP19113 662 aa13.34□□□□□ -0.27
NCDN-203ENST00000373253 ZNF177Q13360 481 aaPredicted RBP13.34□□□□□ -0.27
NCDN-203ENST00000373253 UGP2Q16851 508 aa13.34□□□□□ -0.27
NCDN-203ENST00000373253 ZNF789Q5FWF6 425 aa13.34□□□□□ -0.27
NCDN-203ENST00000373253 PCID2Q5JVF3 399 aa13.34□□□□□ -0.27
NCDN-203ENST00000373253 SNX30Q5VWJ9 437 aa13.34□□□□□ -0.27
NCDN-203ENST00000373253 CLEC6AQ6EIG7 209 aa13.34□□□□□ -0.27
NCDN-203ENST00000373253 LRRC8DQ7L1W4 858 aa13.34□□□□□ -0.27
NCDN-203ENST00000373253 OR13C4Q8NGS5 318 aa13.34□□□□□ -0.27
NCDN-203ENST00000373253 ARNTL2Q8WYA1 636 aa13.34□□□□□ -0.27
NCDN-203ENST00000373253 NDE1Q9NXR1 346 aa13.34□□□□□ -0.27
NCDN-203ENST00000373253 TAGLN3Q9UI15 199 aa13.34□□□□□ -0.27
NCDN-203ENST00000373253 TYW5A2RUC4 315 aaKnown RBP13.34□□□□□ -0.27
NCDN-203ENST00000373253 SORBS2O94875 1100 aaKnown RBP13.34□□□□□ -0.27
NCDN-203ENST00000373253 RHOCP08134 193 aa13.34□□□□□ -0.27
NCDN-203ENST00000373253 PTDSS1P48651 473 aaKnown RBP13.34□□□□□ -0.27
NCDN-203ENST00000373253 NEK3P51956 506 aa13.34□□□□□ -0.27
NCDN-203ENST00000373253 PPIDQ08752 370 aaKnown RBP13.34□□□□□ -0.27
NCDN-203ENST00000373253 CDH18Q13634 790 aa13.34□□□□□ -0.27
NCDN-203ENST00000373253 PFKFB4Q16877 469 aa13.34□□□□□ -0.27
NCDN-203ENST00000373253 TNFAIP8L3Q5GJ75 292 aa13.34□□□□□ -0.27
NCDN-203ENST00000373253 GPR158Q5T848 1215 aa13.34□□□□□ -0.27
NCDN-203ENST00000373253 FUT10Q6P4F1 479 aa13.34□□□□□ -0.27
NCDN-203ENST00000373253 RNF19BQ6ZMZ0 732 aa13.34□□□□□ -0.27
NCDN-203ENST00000373253 EGFL6Q8IUX8 553 aa13.34□□□□□ -0.27
NCDN-203ENST00000373253 CCNJLQ8IV13 435 aa13.34□□□□□ -0.27
NCDN-203ENST00000373253 PHTF2Q8N3S3 785 aa13.34□□□□□ -0.27
NCDN-203ENST00000373253 FSTL5Q8N475 847 aaPredicted RBP13.34□□□□□ -0.27
NCDN-203ENST00000373253 SCG3Q8WXD2 468 aaKnown RBP13.34□□□□□ -0.27
NCDN-203ENST00000373253 SEPT8Q92599 483 aa13.34□□□□□ -0.27
NCDN-203ENST00000373253 RBBP8Q99708 897 aa13.34□□□□□ -0.27
NCDN-203ENST00000373253 GPR63Q9BZJ6 419 aa13.34□□□□□ -0.27
NCDN-203ENST00000373253 GABRDO14764 452 aa13.34□□□□□ -0.27
NCDN-203ENST00000373253 NVLO15381 856 aaKnown RBP13.34□□□□□ -0.27
NCDN-203ENST00000373253 DLDP09622 509 aaKnown RBP13.34□□□□□ -0.27
NCDN-203ENST00000373253 PRKCHP24723 683 aa13.34□□□□□ -0.27
NCDN-203ENST00000373253 SLC1A2P43004 574 aa13.34□□□□□ -0.27
NCDN-203ENST00000373253 KYAT3Q6YP21 454 aaKnown RBP13.34□□□□□ -0.27
NCDN-203ENST00000373253 OTOP2Q7RTS6 562 aa13.34□□□□□ -0.27
NCDN-203ENST00000373253 DNAJC9Q8WXX5 260 aa13.34□□□□□ -0.27
NCDN-203ENST00000373253 CCDC189A1A4V9 331 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms