RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 ISL2Q96A47 359 aa25.31■■□□□ 1.64
CTSA-203ENST00000372459 TRPC7Q9HCX4 862 aa25.31■■□□□ 1.64
CTSA-203ENST00000372459 DCDC2Q9UHG0 476 aa25.31■■□□□ 1.64
CTSA-203ENST00000372459 CHD5Q8TDI0 1954 aa25.31■■□□□ 1.64
CTSA-203ENST00000372459 A0A1B0GVM2 712 aa25.3■■□□□ 1.64
CTSA-203ENST00000372459 TCAF2A6NFQ2 919 aa25.3■■□□□ 1.64
CTSA-203ENST00000372459 HOXD9P28356 352 aaPredicted RBP25.3■■□□□ 1.64
CTSA-203ENST00000372459 SERPINB8P50452 374 aa25.3■■□□□ 1.64
CTSA-203ENST00000372459 PPIGQ13427 754 aaKnown RBP eCLIP25.3■■□□□ 1.641e-7■■□□□ 13.7
CTSA-203ENST00000372459 FSTL4Q6MZW2 842 aa25.3■■□□□ 1.64
CTSA-203ENST00000372459 SETD3Q86TU7 594 aaPredicted RBP25.3■■□□□ 1.64
CTSA-203ENST00000372459 OR7D4Q8NG98 312 aa25.3■■□□□ 1.64
CTSA-203ENST00000372459 KLC4Q9NSK0 619 aa25.3■■□□□ 1.64
CTSA-203ENST00000372459 SMPD4Q9NXE4 827 aa25.3■■□□□ 1.64
CTSA-203ENST00000372459 MKI67P46013 3256 aaKnown RBP25.3■■□□□ 1.64
CTSA-203ENST00000372459 MIA3Q5JRA6 1907 aa25.3■■□□□ 1.64
CTSA-203ENST00000372459 ILVBLA1L0T0 632 aa25.29■■□□□ 1.64
CTSA-203ENST00000372459 HEATR9A2RTY3 570 aa25.29■■□□□ 1.64
CTSA-203ENST00000372459 VGLL3A8MV65 326 aa25.29■■□□□ 1.64
CTSA-203ENST00000372459 KLF11O14901 512 aa25.29■■□□□ 1.64
CTSA-203ENST00000372459 TGM5O43548 720 aa25.29■■□□□ 1.64
CTSA-203ENST00000372459 LATS1O95835 1130 aa25.29■■□□□ 1.64
CTSA-203ENST00000372459 RHOCP08134 193 aa25.29■■□□□ 1.64
CTSA-203ENST00000372459 SPATA31D3P0C874 917 aa25.29■■□□□ 1.64
CTSA-203ENST00000372459 BGNP21810 368 aa25.29■■□□□ 1.64
CTSA-203ENST00000372459 SERPINH1P50454 418 aaKnown RBP25.29■■□□□ 1.64
CTSA-203ENST00000372459 FYB2Q5VWT5 728 aa25.29■■□□□ 1.64
CTSA-203ENST00000372459 RNF43Q68DV7 783 aa25.29■■□□□ 1.64
CTSA-203ENST00000372459 ESRP1Q6NXG1 681 aaKnown RBP25.29■■□□□ 1.64
CTSA-203ENST00000372459 SPATA31D4Q6ZUB0 917 aa25.29■■□□□ 1.64
CTSA-203ENST00000372459 ZBED2Q9BTP6 218 aa25.29■■□□□ 1.64
CTSA-203ENST00000372459 STOML2Q9UJZ1 356 aa25.29■■□□□ 1.64
CTSA-203ENST00000372459 LINC00271P0C7V0 271 aa25.29■■□□□ 1.64
CTSA-203ENST00000372459 SGSHP51688 502 aa25.29■■□□□ 1.64
CTSA-203ENST00000372459 OXCT1P55809 520 aa25.29■■□□□ 1.64
CTSA-203ENST00000372459 SMAD3P84022 425 aaKnown RBP25.29■■□□□ 1.64
CTSA-203ENST00000372459 SEPT6Q14141 434 aa25.29■■□□□ 1.64
CTSA-203ENST00000372459 INSCQ1MX18 579 aa25.29■■□□□ 1.64
CTSA-203ENST00000372459 OR52K2Q8NGK3 314 aa25.29■■□□□ 1.64
CTSA-203ENST00000372459 WBP2Q969T9 261 aa25.29■■□□□ 1.64
CTSA-203ENST00000372459 ATXN7L3BQ96GX2 97 aa25.29■■□□□ 1.64
CTSA-203ENST00000372459 ZFRQ96KR1 1074 aaKnown RBP25.29■■□□□ 1.64
CTSA-203ENST00000372459 RANBP9Q96S59 729 aa25.29■■□□□ 1.64
CTSA-203ENST00000372459 SEMA3CQ99985 751 aa25.29■■□□□ 1.64
CTSA-203ENST00000372459 SPON2Q9BUD6 331 aa25.29■■□□□ 1.64
CTSA-203ENST00000372459 TSSK1BQ9BXA7 367 aa25.29■■□□□ 1.64
CTSA-203ENST00000372459 IL21Q9HBE4 155 aa25.29■■□□□ 1.64
CTSA-203ENST00000372459 SNX15Q9NRS6 342 aa25.29■■□□□ 1.64
CTSA-203ENST00000372459 TREX1Q9NSU2 369 aa25.29■■□□□ 1.64
CTSA-203ENST00000372459 INSL6Q9Y581 213 aa25.29■■□□□ 1.64
CTSA-203ENST00000372459 GOLGA8TH3BQL2 631 aa25.28■■□□□ 1.64
CTSA-203ENST00000372459 KDELR3O43731 214 aa25.28■■□□□ 1.64
CTSA-203ENST00000372459 VAPBO95292 243 aa25.28■■□□□ 1.64
CTSA-203ENST00000372459 MAGEA12P43365 314 aa25.28■■□□□ 1.64
CTSA-203ENST00000372459 CNTN4Q8IWV2 1026 aa25.28■■□□□ 1.64
CTSA-203ENST00000372459 CLP1Q92989 425 aaKnown RBP25.28■■□□□ 1.64
CTSA-203ENST00000372459 MCMBPQ9BTE3 642 aa25.28■■□□□ 1.64
CTSA-203ENST00000372459 PLXNA4Q9HCM2 1894 aa25.28■■□□□ 1.64
CTSA-203ENST00000372459 MYLKQ15746 1914 aa25.27■■□□□ 1.64
CTSA-203ENST00000372459 TTC24A2A3L6 582 aaPredicted RBP25.27■■□□□ 1.64
CTSA-203ENST00000372459 TSPAN3O60637 253 aa25.27■■□□□ 1.64
CTSA-203ENST00000372459 HADHAP40939 763 aa25.27■■□□□ 1.64
CTSA-203ENST00000372459 ARCN1P48444 511 aaKnown RBP25.27■■□□□ 1.64
CTSA-203ENST00000372459 LBX1P52954 281 aa25.27■■□□□ 1.64
CTSA-203ENST00000372459 UGP2Q16851 508 aa25.27■■□□□ 1.64
CTSA-203ENST00000372459 KIAA0930Q6ICG6 404 aaPredicted RBP25.27■■□□□ 1.64
CTSA-203ENST00000372459 KLHL23Q8NBE8 558 aa25.27■■□□□ 1.64
CTSA-203ENST00000372459 CYP2S1Q96SQ9 504 aa25.27■■□□□ 1.64
CTSA-203ENST00000372459 UBA2Q9UBT2 640 aaPredicted RBP25.27■■□□□ 1.64
CTSA-203ENST00000372459 PRKAG2Q9UGJ0 569 aa25.27■■□□□ 1.64
CTSA-203ENST00000372459 SEPT3Q9UH03 358 aa25.27■■□□□ 1.64
CTSA-203ENST00000372459 TBC1D30Q9Y2I9 924 aa25.27■■□□□ 1.64
CTSA-203ENST00000372459 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.27■■□□□ 1.64
CTSA-203ENST00000372459 BIRC5O15392 142 aa25.27■■□□□ 1.64
CTSA-203ENST00000372459 OLFM2O95897 454 aa25.27■■□□□ 1.64
CTSA-203ENST00000372459 LRG1P02750 347 aa25.27■■□□□ 1.64
CTSA-203ENST00000372459 TROVE2P10155 538 aaKnown RBP eCLIP25.27■■□□□ 1.64
CTSA-203ENST00000372459 NUMBP49757 651 aa25.27■■□□□ 1.64
CTSA-203ENST00000372459 IHHQ14623 411 aa25.27■■□□□ 1.64
CTSA-203ENST00000372459 CNGA3Q16281 694 aa25.27■■□□□ 1.64
CTSA-203ENST00000372459 NUDCD3Q8IVD9 361 aa25.27■■□□□ 1.64
CTSA-203ENST00000372459 ARL14EPQ8N8R7 260 aaPredicted RBP25.27■■□□□ 1.64
CTSA-203ENST00000372459 VPS39Q96JC1 886 aa25.27■■□□□ 1.64
CTSA-203ENST00000372459 ABCF3Q9NUQ8 709 aa25.27■■□□□ 1.64
CTSA-203ENST00000372459 SLC2A6Q9UGQ3 507 aa25.27■■□□□ 1.64
CTSA-203ENST00000372459 SLC12A4Q9UP95 1085 aa25.27■■□□□ 1.64
CTSA-203ENST00000372459 MTO1Q9Y2Z2 717 aaKnown RBP25.27■■□□□ 1.64
CTSA-203ENST00000372459 LOC285095A0A1B0GVY8 99 aa25.26■■□□□ 1.63
CTSA-203ENST00000372459 MUSKO15146 869 aa25.26■■□□□ 1.63
CTSA-203ENST00000372459 CXCL14O95715 111 aa25.26■■□□□ 1.63
CTSA-203ENST00000372459 TOP3BO95985 862 aaKnown RBP25.26■■□□□ 1.63
CTSA-203ENST00000372459 MPOP05164 745 aa25.26■■□□□ 1.63
CTSA-203ENST00000372459 HDCP19113 662 aa25.26■■□□□ 1.63
CTSA-203ENST00000372459 MNAT1P51948 309 aa25.26■■□□□ 1.63
CTSA-203ENST00000372459 GTF2A1P52655 376 aaPredicted RBP25.26■■□□□ 1.63
CTSA-203ENST00000372459 RFTN1Q14699 578 aaPredicted RBP25.26■■□□□ 1.63
CTSA-203ENST00000372459 DBN1Q16643 649 aa25.26■■□□□ 1.63
CTSA-203ENST00000372459 N4BP2L1Q5TBK1 243 aaPredicted RBP25.26■■□□□ 1.63
CTSA-203ENST00000372459 ATG16L1Q676U5 607 aa25.26■■□□□ 1.63
CTSA-203ENST00000372459 TXNDC8Q6A555 127 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms