RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 DSG4Q86SJ6 1040 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 ACOT1Q86TX2 421 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 GPR180Q86V85 440 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 CARM1Q86X55 608 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 SPPL2CQ8IUH8 684 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 EPHX4Q8IUS5 362 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 RNF168Q8IYW5 571 aaPredicted RBP5.49□□□□□ -1.53
ATG4A-204ENST00000372246 C1orf127Q8N9H9 656 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 TBC1D15Q8TC07 691 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 TMEM174Q8WUU8 243 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 BHMTQ93088 406 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 PLEKHA8Q96JA3 519 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 MTG1Q9BT17 334 aaPredicted RBP5.49□□□□□ -1.53
ATG4A-204ENST00000372246 CCDC28BQ9BUN5 200 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 HERC2P3Q9BVR0 1158 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 FTHL17Q9BXU8 183 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 MIR1-1HGQ9H1L0 117 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 DPEP3Q9H4B8 488 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 Q9H521 79 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 RPF2Q9H7B2 306 aaKnown RBP5.49□□□□□ -1.53
ATG4A-204ENST00000372246 POLR1BQ9H9Y6 1135 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 CXorf21Q9HAI6 301 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 TIMMDC1Q9NPL8 285 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 IARS2Q9NSE4 1012 aaKnown RBP5.49□□□□□ -1.53
ATG4A-204ENST00000372246 TXNDC16Q9P2K2 825 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 AASSQ9UDR5 926 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 TSPAN16Q9UKR8 245 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 MYRFQ9Y2G1 1151 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 NME7Q9Y5B8 376 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 PCDHB12Q9Y5F1 795 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 CNTNAP1P78357 1384 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 KANSL1LA0AUZ9 987 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 TMEM247A6NEH6 219 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 INO80B-WBP1J3KQ70 363 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 RNF103O00237 685 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 MATN2O00339 956 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 CCL22O00626 93 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 TRDMT1O14717 391 aaKnown RBP5.49□□□□□ -1.53
ATG4A-204ENST00000372246 OXSR1O95747 527 aaPredicted RBP5.49□□□□□ -1.53
ATG4A-204ENST00000372246 LCP1P13796 627 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 BDNFP23560 247 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 IGFBP6P24592 240 aaPredicted RBP5.49□□□□□ -1.53
ATG4A-204ENST00000372246 GJA8P48165 433 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 ALDH3B2P48448 385 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 JAK3P52333 1124 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 ZNF143P52747 638 aaPredicted RBP5.49□□□□□ -1.53
ATG4A-204ENST00000372246 C1QTNF8P60827 252 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 LSM3P62310 102 aaKnown RBP5.49□□□□□ -1.53
ATG4A-204ENST00000372246 KRT76Q01546 638 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 PRKCQQ04759 706 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 GRM3Q14832 879 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 RAB39AQ14964 217 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 DUOXA2Q1HG44 320 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 KIZQ2M2Z5 673 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 SOWAHAQ2M3V2 549 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 PGS1Q32NB8 556 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 AGKQ53H12 422 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 PYCR3Q53H96 274 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 NOMO2Q5JPE7 1267 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 PPP1R26Q5T8A7 1209 aaPredicted RBP5.49□□□□□ -1.53
ATG4A-204ENST00000372246 TTC33Q6PID6 262 aaPredicted RBP5.49□□□□□ -1.53
ATG4A-204ENST00000372246 CNSTQ6PJW8 725 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 ZBTB49Q6ZSB9 765 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 SLC41A1Q8IVJ1 513 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 CEP97Q8IW35 865 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 MFSD6LQ8IWD5 586 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 DENND6AQ8IWF6 608 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 USP33Q8TEY7 942 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 KCTD15Q96SI1 283 aaPredicted RBP5.49□□□□□ -1.53
ATG4A-204ENST00000372246 CSF3RQ99062 836 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 GPATCH1Q9BRR8 931 aaKnown RBP5.49□□□□□ -1.53
ATG4A-204ENST00000372246 CDCA7Q9BWT1 371 aaPredicted RBP5.49□□□□□ -1.53
ATG4A-204ENST00000372246 INO80BQ9C086 356 aaPredicted RBP5.49□□□□□ -1.53
ATG4A-204ENST00000372246 OSBPL2Q9H1P3 480 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 ATXN3LQ9H3M9 355 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 RNF146Q9NTX7 359 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 GTSE1Q9NYZ3 720 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 ZNF70Q9UC06 446 aaPredicted RBP5.49□□□□□ -1.53
ATG4A-204ENST00000372246 RGPD3A6NKT7 1758 aaPredicted RBP5.48□□□□□ -1.53
ATG4A-204ENST00000372246 RGPD4Q7Z3J3 1758 aa5.48□□□□□ -1.53
ATG4A-204ENST00000372246 HTR3EA5X5Y0 456 aa5.48□□□□□ -1.53
ATG4A-204ENST00000372246 LRRC14BA6NHZ5 514 aa5.48□□□□□ -1.53
ATG4A-204ENST00000372246 FAM72CH0Y354 149 aa5.48□□□□□ -1.53
ATG4A-204ENST00000372246 LSM1O15116 133 aaKnown RBP5.48□□□□□ -1.53
ATG4A-204ENST00000372246 MSCO60682 206 aa5.48□□□□□ -1.53
ATG4A-204ENST00000372246 XYLBO75191 536 aa5.48□□□□□ -1.53
ATG4A-204ENST00000372246 BCAS2O75934 225 aaPredicted RBP5.48□□□□□ -1.53
ATG4A-204ENST00000372246 ENDOD1O94919 500 aa5.48□□□□□ -1.53
ATG4A-204ENST00000372246 IL18RAPO95256 599 aa5.48□□□□□ -1.53
ATG4A-204ENST00000372246 LSM8O95777 96 aaKnown RBP5.48□□□□□ -1.53
ATG4A-204ENST00000372246 NAT2P11245 290 aa5.48□□□□□ -1.53
ATG4A-204ENST00000372246 PORP16435 677 aaPredicted RBP5.48□□□□□ -1.53
ATG4A-204ENST00000372246 FSHRP23945 695 aa5.48□□□□□ -1.53
ATG4A-204ENST00000372246 NMBRP28336 390 aa5.48□□□□□ -1.53
ATG4A-204ENST00000372246 POLR2BP30876 1174 aaKnown RBP5.48□□□□□ -1.53
ATG4A-204ENST00000372246 TGFBR1P36897 503 aa5.48□□□□□ -1.53
ATG4A-204ENST00000372246 CLCN3P51790 818 aa5.48□□□□□ -1.53
ATG4A-204ENST00000372246 BCAT1P54687 386 aa5.48□□□□□ -1.53
ATG4A-204ENST00000372246 C21orf59P57076 290 aa5.48□□□□□ -1.53
ATG4A-204ENST00000372246 PSME3P61289 254 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms