RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 TUSC3Q13454 348 aa19.85■□□□□ 0.77
LMO4-202ENST00000370544 PCDH20Q8N6Y1 951 aaKnown RBP19.85■□□□□ 0.77
LMO4-202ENST00000370544 MARK4Q96L34 752 aa19.85■□□□□ 0.77
LMO4-202ENST00000370544 MBOAT7Q96N66 472 aa19.85■□□□□ 0.77
LMO4-202ENST00000370544 TBCDQ9BTW9 1192 aa19.85■□□□□ 0.77
LMO4-202ENST00000370544 OSBPL10Q9BXB5 764 aa19.85■□□□□ 0.77
LMO4-202ENST00000370544 KPNA5O15131 536 aa19.85■□□□□ 0.77
LMO4-202ENST00000370544 CLOCKO15516 846 aa19.85■□□□□ 0.77
LMO4-202ENST00000370544 SNX3O60493 162 aa19.85■□□□□ 0.77
LMO4-202ENST00000370544 GALNT3Q14435 633 aa19.85■□□□□ 0.77
LMO4-202ENST00000370544 USP39Q53GS9 565 aaKnown RBP19.85■□□□□ 0.77
LMO4-202ENST00000370544 LYPLAL1Q5VWZ2 237 aa19.85■□□□□ 0.77
LMO4-202ENST00000370544 MARK2Q7KZI7 788 aaKnown RBP19.85■□□□□ 0.77
LMO4-202ENST00000370544 RMND5BQ96G75 393 aaPredicted RBP19.85■□□□□ 0.77
LMO4-202ENST00000370544 MRPL57Q9BQC6 102 aaKnown RBP19.85■□□□□ 0.77
LMO4-202ENST00000370544 LOC102724159A0A0B4J2E5 919 aa19.84■□□□□ 0.77
LMO4-202ENST00000370544 PSMB9P28065 219 aa19.84■□□□□ 0.77
LMO4-202ENST00000370544 SMAD3P84022 425 aaKnown RBP19.84■□□□□ 0.77
LMO4-202ENST00000370544 SQLEQ14534 574 aa19.84■□□□□ 0.77
LMO4-202ENST00000370544 PWP2Q15269 919 aaKnown RBP19.84■□□□□ 0.77
LMO4-202ENST00000370544 FAM187BQ17R55 369 aa19.84■□□□□ 0.77
LMO4-202ENST00000370544 PTPN20Q4JDL3 420 aa19.84■□□□□ 0.77
LMO4-202ENST00000370544 FGD3Q5JSP0 725 aa19.84■□□□□ 0.77
LMO4-202ENST00000370544 LRP10Q7Z4F1 713 aa19.84■□□□□ 0.77
LMO4-202ENST00000370544 CCDC103Q8IW40 242 aa19.84■□□□□ 0.77
LMO4-202ENST00000370544 QRFPRQ96P65 431 aa19.84■□□□□ 0.77
LMO4-202ENST00000370544 AP3M1Q9Y2T2 418 aa19.84■□□□□ 0.77
LMO4-202ENST00000370544 C1orf232A0A0U1RR37 186 aa19.84■□□□□ 0.77
LMO4-202ENST00000370544 MLYCDO95822 493 aa19.84■□□□□ 0.77
LMO4-202ENST00000370544 ARCQ7LC44 396 aa19.84■□□□□ 0.77
LMO4-202ENST00000370544 IRF2BP1Q8IU81 584 aa19.84■□□□□ 0.77
LMO4-202ENST00000370544 ATL1Q8WXF7 558 aa19.84■□□□□ 0.77
LMO4-202ENST00000370544 ALG3Q92685 438 aa19.84■□□□□ 0.77
LMO4-202ENST00000370544 VMP1Q96GC9 406 aa19.84■□□□□ 0.77
LMO4-202ENST00000370544 FCRL2Q96LA5 508 aaPredicted RBP19.84■□□□□ 0.77
LMO4-202ENST00000370544 APOL4Q9BPW4 351 aa19.84■□□□□ 0.77
LMO4-202ENST00000370544 C9orf16Q9BUW7 83 aa19.84■□□□□ 0.77
LMO4-202ENST00000370544 ENOPH1Q9UHY7 261 aa19.84■□□□□ 0.77
LMO4-202ENST00000370544 AGO1Q9UL18 857 aaKnown RBP19.84■□□□□ 0.77
LMO4-202ENST00000370544 ENTPD4Q9Y227 616 aa19.84■□□□□ 0.77
LMO4-202ENST00000370544 CLUHO75153 1309 aa19.84■□□□□ 0.77
LMO4-202ENST00000370544 CACNA2D1P54289 1103 aa19.84■□□□□ 0.77
LMO4-202ENST00000370544 LBX2Q6XYB7 198 aa19.84■□□□□ 0.77
LMO4-202ENST00000370544 MON1AQ86VX9 555 aa19.84■□□□□ 0.77
LMO4-202ENST00000370544 GOLGA2P5Q9HBQ8 144 aa19.84■□□□□ 0.77
LMO4-202ENST00000370544 ZNF446Q9NWS9 450 aa19.84■□□□□ 0.77
LMO4-202ENST00000370544 PRKAG3Q9UGI9 489 aa19.84■□□□□ 0.77
LMO4-202ENST00000370544 A0A088AWK7 358 aa19.84■□□□□ 0.77
LMO4-202ENST00000370544 NDUFB5O43674 189 aa19.84■□□□□ 0.77
LMO4-202ENST00000370544 ZNF10P21506 573 aaPredicted RBP19.84■□□□□ 0.77
LMO4-202ENST00000370544 FLT3LGP49771 235 aa19.84■□□□□ 0.77
LMO4-202ENST00000370544 NAA20P61599 178 aa19.84■□□□□ 0.77
LMO4-202ENST00000370544 PTPRNQ16849 979 aa19.84■□□□□ 0.77
LMO4-202ENST00000370544 POM121L1PQ3SYA9 428 aa19.84■□□□□ 0.77
LMO4-202ENST00000370544 RAET1GQ6H3X3 334 aa19.84■□□□□ 0.77
LMO4-202ENST00000370544 VN1R5Q7Z5H4 357 aa19.84■□□□□ 0.77
LMO4-202ENST00000370544 DPP10Q8N608 796 aa19.84■□□□□ 0.77
LMO4-202ENST00000370544 BHLHE22Q8NFJ8 381 aaPredicted RBP19.84■□□□□ 0.77
LMO4-202ENST00000370544 NDOR1Q9UHB4 597 aa19.84■□□□□ 0.77
LMO4-202ENST00000370544 AVILO75366 819 aa19.83■□□□□ 0.77
LMO4-202ENST00000370544 CNPP09543 421 aaKnown RBP19.83■□□□□ 0.77
LMO4-202ENST00000370544 PIK3R1P27986 724 aa19.83■□□□□ 0.77
LMO4-202ENST00000370544 THOP1P52888 689 aa19.83■□□□□ 0.77
LMO4-202ENST00000370544 XYLT1Q86Y38 959 aa19.83■□□□□ 0.77
LMO4-202ENST00000370544 STK32AQ8WU08 396 aa19.83■□□□□ 0.77
LMO4-202ENST00000370544 MTERF3Q96E29 417 aa19.83■□□□□ 0.77
LMO4-202ENST00000370544 EXOC2Q96KP1 924 aa19.83■□□□□ 0.77
LMO4-202ENST00000370544 NIFKQ9BYG3 293 aaKnown RBP19.83■□□□□ 0.77
LMO4-202ENST00000370544 RIBC2Q9H4K1 309 aa19.83■□□□□ 0.77
LMO4-202ENST00000370544 ARHGAP28Q9P2N2 729 aa19.83■□□□□ 0.77
LMO4-202ENST00000370544 SMIM28A0A1B0GU29 152 aa19.83■□□□□ 0.77
LMO4-202ENST00000370544 PAPSS1O43252 624 aaPredicted RBP19.83■□□□□ 0.77
LMO4-202ENST00000370544 ANGPT1Q15389 498 aa19.83■□□□□ 0.77
LMO4-202ENST00000370544 PDK4Q16654 411 aa19.83■□□□□ 0.77
LMO4-202ENST00000370544 TYW3Q6IPR3 259 aaKnown RBP19.83■□□□□ 0.77
LMO4-202ENST00000370544 CES5AQ6NT32 575 aa19.83■□□□□ 0.77
LMO4-202ENST00000370544 FOXR1Q6PIV2 292 aa19.83■□□□□ 0.77
LMO4-202ENST00000370544 LCLAT1Q6UWP7 414 aa19.83■□□□□ 0.77
LMO4-202ENST00000370544 ZNF541Q9H0D2 1346 aa19.83■□□□□ 0.76
LMO4-202ENST00000370544 MAGEC1O60732 1142 aa19.83■□□□□ 0.76
LMO4-202ENST00000370544 CILPO75339 1184 aa19.83■□□□□ 0.76
LMO4-202ENST00000370544 GUCY1B2O75343 617 aa19.83■□□□□ 0.76
LMO4-202ENST00000370544 PAGE1O75459 146 aa19.83■□□□□ 0.76
LMO4-202ENST00000370544 C4BPAP04003 597 aaKnown RBP19.83■□□□□ 0.76
LMO4-202ENST00000370544 GTF2E2P29084 291 aaKnown RBP19.83■□□□□ 0.76
LMO4-202ENST00000370544 GPR1P46091 355 aa19.83■□□□□ 0.76
LMO4-202ENST00000370544 CDK18Q07002 472 aa19.83■□□□□ 0.76
LMO4-202ENST00000370544 HLA-DQA1Q5Y7H0 255 aa19.83■□□□□ 0.76
LMO4-202ENST00000370544 RNF43Q68DV7 783 aa19.83■□□□□ 0.76
LMO4-202ENST00000370544 STRADAQ7RTN6 431 aa19.83■□□□□ 0.76
LMO4-202ENST00000370544 SETD9Q8NE22 299 aa19.83■□□□□ 0.76
LMO4-202ENST00000370544 NMD3Q96D46 503 aaKnown RBP19.83■□□□□ 0.76
LMO4-202ENST00000370544 SEMA6AQ9H2E6 1030 aa19.83■□□□□ 0.76
LMO4-202ENST00000370544 C1QTNF3-AMACRE9PGA6 284 aa19.83■□□□□ 0.76
LMO4-202ENST00000370544 PIRTP0C851 137 aa19.83■□□□□ 0.76
LMO4-202ENST00000370544 RDH11Q8TC12 318 aa19.83■□□□□ 0.76
LMO4-202ENST00000370544 PROX1Q92786 737 aa19.83■□□□□ 0.76
LMO4-202ENST00000370544 B3GNT5Q9BYG0 378 aa19.83■□□□□ 0.76
LMO4-202ENST00000370544 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.82■□□□□ 0.76
LMO4-202ENST00000370544 NOS3P29474 1203 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms