RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 LRRC8BQ6P9F7 803 aa12.49□□□□□ -0.41
TUBE1-202ENST00000368662 TMC3Q7Z5M5 1100 aa12.49□□□□□ -0.41
TUBE1-202ENST00000368662 CCDC25Q86WR0 208 aa12.49□□□□□ -0.41
TUBE1-202ENST00000368662 RELL1Q8IUW5 271 aa12.49□□□□□ -0.41
TUBE1-202ENST00000368662 SH2D3CQ8N5H7 860 aa12.49□□□□□ -0.41
TUBE1-202ENST00000368662 TERB1Q8NA31 727 aa12.49□□□□□ -0.41
TUBE1-202ENST00000368662 ARRDC2Q8TBH0 407 aa12.49□□□□□ -0.41
TUBE1-202ENST00000368662 DNASE1L2Q92874 299 aa12.49□□□□□ -0.41
TUBE1-202ENST00000368662 SERPINB12Q96P63 405 aa12.49□□□□□ -0.41
TUBE1-202ENST00000368662 NUDCD1Q96RS6 583 aa12.49□□□□□ -0.41
TUBE1-202ENST00000368662 MLPHQ9BV36 600 aaPredicted RBP12.49□□□□□ -0.41
TUBE1-202ENST00000368662 FSD1LQ9BXM9 530 aa12.49□□□□□ -0.41
TUBE1-202ENST00000368662 CIPCQ9C0C6 399 aa12.49□□□□□ -0.41
TUBE1-202ENST00000368662 LIMD1Q9UGP4 676 aa12.49□□□□□ -0.41
TUBE1-202ENST00000368662 FCF1Q9Y324 198 aaKnown RBP12.49□□□□□ -0.41
TUBE1-202ENST00000368662 ACTL7AQ9Y615 435 aa12.49□□□□□ -0.41
TUBE1-202ENST00000368662 PRUNE2Q8WUY3 3088 aa12.48□□□□□ -0.41
TUBE1-202ENST00000368662 MUSKO15146 869 aa12.48□□□□□ -0.41
TUBE1-202ENST00000368662 TRIM24O15164 1050 aa12.48□□□□□ -0.41
TUBE1-202ENST00000368662 MT-CYBP00156 380 aaPredicted RBP12.48□□□□□ -0.41
TUBE1-202ENST00000368662 SRCP12931 536 aa12.48□□□□□ -0.41
TUBE1-202ENST00000368662 CA4P22748 312 aa12.48□□□□□ -0.41
TUBE1-202ENST00000368662 OPRD1P41143 372 aa12.48□□□□□ -0.41
TUBE1-202ENST00000368662 CD86P42081 329 aa12.48□□□□□ -0.41
TUBE1-202ENST00000368662 SLC6A11P48066 632 aa12.48□□□□□ -0.41
TUBE1-202ENST00000368662 CSNK1DP48730 415 aa12.48□□□□□ -0.41
TUBE1-202ENST00000368662 SCNN1BP51168 640 aa12.48□□□□□ -0.41
TUBE1-202ENST00000368662 ST8SIA6P61647 398 aa12.48□□□□□ -0.41
TUBE1-202ENST00000368662 DNAJC21Q5F1R6 531 aaKnown RBP12.48□□□□□ -0.41
TUBE1-202ENST00000368662 SPDYCQ5MJ68 293 aa12.48□□□□□ -0.41
TUBE1-202ENST00000368662 SYCP2LQ5T4T6 812 aa12.48□□□□□ -0.41
TUBE1-202ENST00000368662 TMEM215Q68D42 235 aa12.48□□□□□ -0.41
TUBE1-202ENST00000368662 PRPF39Q86UA1 669 aaKnown RBP12.48□□□□□ -0.41
TUBE1-202ENST00000368662 MREGQ8N565 214 aa12.48□□□□□ -0.41
TUBE1-202ENST00000368662 PCDH20Q8N6Y1 951 aaKnown RBP12.48□□□□□ -0.41
TUBE1-202ENST00000368662 KDM1BQ8NB78 822 aa12.48□□□□□ -0.41
TUBE1-202ENST00000368662 SPATA22Q8NHS9 363 aa12.48□□□□□ -0.41
TUBE1-202ENST00000368662 UCMAQ8WVF2 138 aa12.48□□□□□ -0.41
TUBE1-202ENST00000368662 TADA1Q96BN2 335 aa12.48□□□□□ -0.41
TUBE1-202ENST00000368662 LRRC39Q96DD0 335 aa12.48□□□□□ -0.41
TUBE1-202ENST00000368662 SCUBE2Q9NQ36 999 aa12.48□□□□□ -0.41
TUBE1-202ENST00000368662 ELOVL2Q9NXB9 296 aa12.48□□□□□ -0.41
TUBE1-202ENST00000368662 UBP1Q9NZI7 540 aa12.48□□□□□ -0.41
TUBE1-202ENST00000368662 LHX3Q9UBR4 397 aa12.48□□□□□ -0.41
TUBE1-202ENST00000368662 PLA2G4CQ9UP65 541 aa12.48□□□□□ -0.41
TUBE1-202ENST00000368662 ERVW-1Q9UQF0 538 aa12.48□□□□□ -0.41
TUBE1-202ENST00000368662 E7ESA3 106 aa12.47□□□□□ -0.41
TUBE1-202ENST00000368662 IGSF6O95976 241 aa12.47□□□□□ -0.41
TUBE1-202ENST00000368662 GRIA2P42262 883 aa12.47□□□□□ -0.41
TUBE1-202ENST00000368662 CTSOP43234 321 aaPredicted RBP12.47□□□□□ -0.41
TUBE1-202ENST00000368662 AP1S1P61966 158 aa12.47□□□□□ -0.41
TUBE1-202ENST00000368662 SNRPD1P62314 119 aaKnown RBP12.47□□□□□ -0.41
TUBE1-202ENST00000368662 SKOR1P84550 965 aa12.47□□□□□ -0.41
TUBE1-202ENST00000368662 PFKPQ01813 784 aa12.47□□□□□ -0.41
TUBE1-202ENST00000368662 DSC2Q02487 901 aa12.47□□□□□ -0.41
TUBE1-202ENST00000368662 NIPAL4Q0D2K0 466 aa12.47□□□□□ -0.41
TUBE1-202ENST00000368662 CDH17Q12864 832 aa12.47□□□□□ -0.41
TUBE1-202ENST00000368662 SLC44A3Q8N4M1 653 aa12.47□□□□□ -0.41
TUBE1-202ENST00000368662 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.47□□□□□ -0.41
TUBE1-202ENST00000368662 RPL10LQ96L21 214 aaKnown RBP12.47□□□□□ -0.41
TUBE1-202ENST00000368662 GDAP1L1Q96MZ0 367 aa12.47□□□□□ -0.41
TUBE1-202ENST00000368662 TBL1YQ9BQ87 522 aa12.47□□□□□ -0.41
TUBE1-202ENST00000368662 ARIH1Q9Y4X5 557 aaPredicted RBP12.47□□□□□ -0.41
TUBE1-202ENST00000368662 TBC1D3BA6NDS4 549 aa12.47□□□□□ -0.41
TUBE1-202ENST00000368662 SMAD6O43541 496 aaKnown RBP12.47□□□□□ -0.41
TUBE1-202ENST00000368662 ATP9BO43861 1147 aa12.47□□□□□ -0.41
TUBE1-202ENST00000368662 GSRP00390 522 aa12.47□□□□□ -0.41
TUBE1-202ENST00000368662 EPOP01588 193 aa12.47□□□□□ -0.41
TUBE1-202ENST00000368662 APODP05090 189 aa12.47□□□□□ -0.41
TUBE1-202ENST00000368662 MMP2P08253 660 aa12.47□□□□□ -0.41
TUBE1-202ENST00000368662 MAGEA3P43357 314 aa12.47□□□□□ -0.41
TUBE1-202ENST00000368662 PMS2P54278 862 aa12.47□□□□□ -0.41
TUBE1-202ENST00000368662 PDIA2Q13087 525 aaKnown RBP12.47□□□□□ -0.41
TUBE1-202ENST00000368662 C22orf39Q6P5X5 142 aa12.47□□□□□ -0.41
TUBE1-202ENST00000368662 TRMT10CQ7L0Y3 403 aaKnown RBP12.47□□□□□ -0.41
TUBE1-202ENST00000368662 CAND1Q86VP6 1230 aaKnown RBP12.47□□□□□ -0.41
TUBE1-202ENST00000368662 PLPP6Q8IY26 295 aa12.47□□□□□ -0.41
TUBE1-202ENST00000368662 PHTF2Q8N3S3 785 aa12.47□□□□□ -0.41
TUBE1-202ENST00000368662 DNAAF3Q8N9W5 541 aa12.47□□□□□ -0.41
TUBE1-202ENST00000368662 IPMKQ8NFU5 416 aa12.47□□□□□ -0.41
TUBE1-202ENST00000368662 OR2AP1Q8NGE2 309 aa12.47□□□□□ -0.41
TUBE1-202ENST00000368662 MAFAQ8NHW3 353 aaPredicted RBP12.47□□□□□ -0.41
TUBE1-202ENST00000368662 TTC8Q8TAM2 541 aa12.47□□□□□ -0.41
TUBE1-202ENST00000368662 TTC25Q96NG3 672 aa12.47□□□□□ -0.41
TUBE1-202ENST00000368662 C8orf33Q9H7E9 229 aaPredicted RBP12.47□□□□□ -0.41
TUBE1-202ENST00000368662 NOD2Q9HC29 1040 aa12.47□□□□□ -0.41
TUBE1-202ENST00000368662 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.46□□□□□ -0.41
TUBE1-202ENST00000368662 K7ERQ8 282 aa12.46□□□□□ -0.41
TUBE1-202ENST00000368662 ALOX15BO15296 676 aa12.46□□□□□ -0.41
TUBE1-202ENST00000368662 PMPCBO75439 489 aa12.46□□□□□ -0.41
TUBE1-202ENST00000368662 KAT7O95251 611 aa12.46□□□□□ -0.41
TUBE1-202ENST00000368662 STK19P49842 368 aaPredicted RBP12.46□□□□□ -0.41
TUBE1-202ENST00000368662 WNT3AP56704 352 aa12.46□□□□□ -0.41
TUBE1-202ENST00000368662 KDSRQ06136 332 aa12.46□□□□□ -0.41
TUBE1-202ENST00000368662 GRM3Q14832 879 aa12.46□□□□□ -0.41
TUBE1-202ENST00000368662 DLG2Q15700 870 aa12.46□□□□□ -0.41
TUBE1-202ENST00000368662 ACCSLQ4AC99 568 aa12.46□□□□□ -0.41
TUBE1-202ENST00000368662 KDELC1Q6UW63 502 aa12.46□□□□□ -0.41
TUBE1-202ENST00000368662 ZNF534Q76KX8 674 aa12.46□□□□□ -0.41
TUBE1-202ENST00000368662 SRLQ86TD4 932 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms