RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 RNF135Q8IUD6 432 aa10.82□□□□□ -0.68
TPM3-212ENST00000368533 PABPC5Q96DU9 382 aaKnown RBP10.82□□□□□ -0.68
TPM3-212ENST00000368533 SERPINB11Q96P15 392 aa10.82□□□□□ -0.68
TPM3-212ENST00000368533 RNF38Q9H0F5 515 aa10.82□□□□□ -0.68
TPM3-212ENST00000368533 PNPLA8Q9NP80 782 aa10.82□□□□□ -0.68
TPM3-212ENST00000368533 ZNF711Q9Y462 761 aa10.82□□□□□ -0.68
TPM3-212ENST00000368533 YIPF1Q9Y548 306 aa10.82□□□□□ -0.68
TPM3-212ENST00000368533 TEX264Q9Y6I9 313 aa10.82□□□□□ -0.68
TPM3-212ENST00000368533 FAM237BA0A1B0GVD1 139 aa10.81□□□□□ -0.68
TPM3-212ENST00000368533 E2F8A0AVK6 867 aa10.81□□□□□ -0.68
TPM3-212ENST00000368533 ARHGEF15O94989 841 aa10.81□□□□□ -0.68
TPM3-212ENST00000368533 BAG2O95816 211 aa10.81□□□□□ -0.68
TPM3-212ENST00000368533 FGBP02675 491 aa10.81□□□□□ -0.68
TPM3-212ENST00000368533 CYP4F8P98187 520 aa10.81□□□□□ -0.68
TPM3-212ENST00000368533 ITKQ08881 620 aa10.81□□□□□ -0.68
TPM3-212ENST00000368533 LSAMPQ13449 338 aa10.81□□□□□ -0.68
TPM3-212ENST00000368533 THOC5Q13769 683 aaKnown RBP10.81□□□□□ -0.68
TPM3-212ENST00000368533 PDK1Q15118 436 aa10.81□□□□□ -0.68
TPM3-212ENST00000368533 PCSK7Q16549 785 aa10.81□□□□□ -0.68
TPM3-212ENST00000368533 MS4A13Q5J8X5 152 aa10.81□□□□□ -0.68
TPM3-212ENST00000368533 STXBP5Q5T5C0 1151 aa10.81□□□□□ -0.68
TPM3-212ENST00000368533 TXNDC8Q6A555 127 aa10.81□□□□□ -0.68
TPM3-212ENST00000368533 IZUMO2Q6UXV1 221 aa10.81□□□□□ -0.68
TPM3-212ENST00000368533 SATL1Q86VE3 508 aa10.81□□□□□ -0.68
TPM3-212ENST00000368533 CAND1Q86VP6 1230 aaKnown RBP10.81□□□□□ -0.68
TPM3-212ENST00000368533 SPATA24Q86W54 205 aa10.81□□□□□ -0.68
TPM3-212ENST00000368533 SPNS2Q8IVW8 549 aa10.81□□□□□ -0.68
TPM3-212ENST00000368533 NTAN1Q96AB6 310 aa10.81□□□□□ -0.68
TPM3-212ENST00000368533 ZNF689Q96CS4 500 aaPredicted RBP10.81□□□□□ -0.68
TPM3-212ENST00000368533 RILPQ96NA2 401 aa10.81□□□□□ -0.68
TPM3-212ENST00000368533 ARL8BQ9NVJ2 186 aa10.81□□□□□ -0.68
TPM3-212ENST00000368533 TRANK1O15050 2925 aa10.81□□□□□ -0.68
TPM3-212ENST00000368533 VCANP13611 3396 aa10.81□□□□□ -0.68
TPM3-212ENST00000368533 HIDE1A8MVS5 230 aa10.81□□□□□ -0.68
TPM3-212ENST00000368533 KCNU1A8MYU2 1149 aa10.81□□□□□ -0.68
TPM3-212ENST00000368533 GOLGA8TH3BQL2 631 aa10.81□□□□□ -0.68
TPM3-212ENST00000368533 CHADO15335 359 aa10.81□□□□□ -0.68
TPM3-212ENST00000368533 MAP3K7O43318 606 aa10.81□□□□□ -0.68
TPM3-212ENST00000368533 ATP9BO43861 1147 aa10.81□□□□□ -0.68
TPM3-212ENST00000368533 RNASEH1O60930 286 aaKnown RBP10.81□□□□□ -0.68
TPM3-212ENST00000368533 IGLV3-25P01717 112 aa10.81□□□□□ -0.68
TPM3-212ENST00000368533 APOEP02649 317 aa10.81□□□□□ -0.68
TPM3-212ENST00000368533 CNPP09543 421 aaKnown RBP10.81□□□□□ -0.68
TPM3-212ENST00000368533 NFKB1P19838 968 aa10.81□□□□□ -0.68
TPM3-212ENST00000368533 PTPN3P26045 913 aa10.81□□□□□ -0.68
TPM3-212ENST00000368533 PTPN4P29074 926 aa10.81□□□□□ -0.68
TPM3-212ENST00000368533 ABCG1P45844 678 aa10.81□□□□□ -0.68
TPM3-212ENST00000368533 ALDH1A3P47895 512 aa10.81□□□□□ -0.68
TPM3-212ENST00000368533 CBX3Q13185 183 aa10.81□□□□□ -0.68
TPM3-212ENST00000368533 RASA2Q15283 850 aa10.81□□□□□ -0.68
TPM3-212ENST00000368533 WASHC2DQ5SRD0 308 aa10.81□□□□□ -0.68
TPM3-212ENST00000368533 FBXL22Q6P050 247 aa10.81□□□□□ -0.68
TPM3-212ENST00000368533 TRMT10BQ6PF06 316 aaKnown RBP10.81□□□□□ -0.68
TPM3-212ENST00000368533 RBM23Q86U06 439 aaKnown RBP10.81□□□□□ -0.68
TPM3-212ENST00000368533 NDUFAF2Q8N183 169 aa10.81□□□□□ -0.68
TPM3-212ENST00000368533 PNPLA1Q8N8W4 532 aa10.81□□□□□ -0.68
TPM3-212ENST00000368533 OR52K1Q8NGK4 314 aa10.81□□□□□ -0.68
TPM3-212ENST00000368533 ZNF461Q8TAF7 563 aa10.81□□□□□ -0.68
TPM3-212ENST00000368533 SLC22A17Q8WUG5 538 aa10.81□□□□□ -0.68
TPM3-212ENST00000368533 PGAP3Q96FM1 320 aaPredicted RBP10.81□□□□□ -0.68
TPM3-212ENST00000368533 TTC1Q99614 292 aa10.81□□□□□ -0.68
TPM3-212ENST00000368533 SEZ6LQ9BYH1 1024 aa10.81□□□□□ -0.68
TPM3-212ENST00000368533 ARHGEF38Q9NXL2 777 aa10.81□□□□□ -0.68
TPM3-212ENST00000368533 PPARGC1AQ9UBK2 798 aaKnown RBP10.81□□□□□ -0.68
TPM3-212ENST00000368533 A0A0A0MRY4 1105 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 CCDC160A6NGH7 325 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 BOLA2-SMG1P6H3BVE0 249 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 J3KR12 359 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 PER2O15055 1255 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 COCHO43405 550 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 PGM3O95394 542 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 ITGA2BP08514 1039 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 MGAT1P26572 445 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 GARSP41250 739 aaKnown RBP10.8□□□□□ -0.68
TPM3-212ENST00000368533 GRIA2P42262 883 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 NR2C2P49116 596 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 RPS24P62847 133 aaKnown RBP10.8□□□□□ -0.68
TPM3-212ENST00000368533 SLC34A1Q06495 639 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 SLC8B1Q6J4K2 584 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 CDHR3Q6ZTQ4 885 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 TTC7BQ86TV6 843 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 NUDCD3Q8IVD9 361 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 ARID3BQ8IVW6 561 aaPredicted RBP10.8□□□□□ -0.68
TPM3-212ENST00000368533 APLFQ8IW19 511 aaPredicted RBP10.8□□□□□ -0.68
TPM3-212ENST00000368533 HS6ST3Q8IZP7 471 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 PPFIBP2Q8ND30 876 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 INPP5DQ92835 1189 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 ATXN7L3BQ96GX2 97 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 SPATA13Q96N96 652 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 SLC9A7Q96T83 725 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 ZNF184Q99676 751 aaPredicted RBP10.8□□□□□ -0.68
TPM3-212ENST00000368533 ZNF395Q9H8N7 513 aaPredicted RBP10.8□□□□□ -0.68
TPM3-212ENST00000368533 SSU72Q9NP77 194 aaKnown RBP10.8□□□□□ -0.68
TPM3-212ENST00000368533 MRPL17Q9NRX2 175 aaKnown RBP10.8□□□□□ -0.68
TPM3-212ENST00000368533 PLK2Q9NYY3 685 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 TLL1O43897 1013 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 KRT38O76015 456 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 PSMG1O95456 288 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 SGSHP51688 502 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 ERVFC1P60507 584 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms