RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 PCDHGB5Q9Y5G0 923 aa12.49□□□□□ -0.41
PTPN7-202ENST00000367279 COPG1Q9Y678 874 aaKnown RBP12.49□□□□□ -0.41
PTPN7-202ENST00000367279 AURKAO14965 403 aa12.49□□□□□ -0.41
PTPN7-202ENST00000367279 PGK1P00558 417 aa12.49□□□□□ -0.41
PTPN7-202ENST00000367279 SLC1A2P43004 574 aa12.49□□□□□ -0.41
PTPN7-202ENST00000367279 RAB27AP51159 221 aa12.49□□□□□ -0.41
PTPN7-202ENST00000367279 NME5P56597 212 aa12.49□□□□□ -0.41
PTPN7-202ENST00000367279 TAS2R39P59534 338 aa12.49□□□□□ -0.41
PTPN7-202ENST00000367279 HNRNPDQ14103 355 aaKnown RBP12.49□□□□□ -0.41
PTPN7-202ENST00000367279 CYTH1Q15438 398 aa12.49□□□□□ -0.41
PTPN7-202ENST00000367279 GEN1Q17RS7 908 aa12.49□□□□□ -0.41
PTPN7-202ENST00000367279 PCID2Q5JVF3 399 aa12.49□□□□□ -0.41
PTPN7-202ENST00000367279 PKN3Q6P5Z2 889 aa12.49□□□□□ -0.41
PTPN7-202ENST00000367279 LINC00523Q86TU6 105 aa12.49□□□□□ -0.41
PTPN7-202ENST00000367279 CENPLQ8N0S6 344 aaPredicted RBP12.49□□□□□ -0.41
PTPN7-202ENST00000367279 NTAN1Q96AB6 310 aa12.49□□□□□ -0.41
PTPN7-202ENST00000367279 GRIP2Q9C0E4 1043 aa12.49□□□□□ -0.41
PTPN7-202ENST00000367279 CNGB3Q9NQW8 809 aa12.49□□□□□ -0.41
PTPN7-202ENST00000367279 RBM22Q9NW64 420 aaKnown RBP eCLIP12.49□□□□□ -0.41
PTPN7-202ENST00000367279 ARHGEF38Q9NXL2 777 aa12.49□□□□□ -0.41
PTPN7-202ENST00000367279 ANKRD6Q9Y2G4 727 aa12.49□□□□□ -0.41
PTPN7-202ENST00000367279 AP4B1Q9Y6B7 739 aa12.49□□□□□ -0.41
PTPN7-202ENST00000367279 TLL2Q9Y6L7 1015 aa12.49□□□□□ -0.41
PTPN7-202ENST00000367279 ATP6AP2A0A1C7CYW4 349 aa12.48□□□□□ -0.41
PTPN7-202ENST00000367279 C9IYK1 514 aa12.48□□□□□ -0.41
PTPN7-202ENST00000367279 STRNO43815 780 aa12.48□□□□□ -0.41
PTPN7-202ENST00000367279 ATP6AP2O75787 350 aa12.48□□□□□ -0.41
PTPN7-202ENST00000367279 SBK3P0C264 359 aa12.48□□□□□ -0.41
PTPN7-202ENST00000367279 NELFEP18615 380 aaKnown RBP12.48□□□□□ -0.41
PTPN7-202ENST00000367279 AXLP30530 894 aa12.48□□□□□ -0.41
PTPN7-202ENST00000367279 PSEN2P49810 448 aa12.48□□□□□ -0.41
PTPN7-202ENST00000367279 SCNN1GP51170 649 aa12.48□□□□□ -0.41
PTPN7-202ENST00000367279 GJA9P57773 515 aa12.48□□□□□ -0.41
PTPN7-202ENST00000367279 COG7P83436 770 aa12.48□□□□□ -0.41
PTPN7-202ENST00000367279 IQSEC1Q6DN90 963 aa12.48□□□□□ -0.41
PTPN7-202ENST00000367279 CYP2R1Q6VVX0 501 aa12.48□□□□□ -0.41
PTPN7-202ENST00000367279 LDB1Q86U70 411 aaPredicted RBP12.48□□□□□ -0.41
PTPN7-202ENST00000367279 SCAMP5Q8TAC9 235 aa12.48□□□□□ -0.41
PTPN7-202ENST00000367279 HEXDCQ8WVB3 486 aa12.48□□□□□ -0.41
PTPN7-202ENST00000367279 MYLPFQ96A32 169 aa12.48□□□□□ -0.41
PTPN7-202ENST00000367279 SLC9A7Q96T83 725 aa12.48□□□□□ -0.41
PTPN7-202ENST00000367279 PRPF18Q99633 342 aaKnown RBP12.48□□□□□ -0.41
PTPN7-202ENST00000367279 PKP2Q99959 881 aa12.48□□□□□ -0.41
PTPN7-202ENST00000367279 PCDHAC1Q9H158 963 aa12.48□□□□□ -0.41
PTPN7-202ENST00000367279 TRPC7Q9HCX4 862 aa12.48□□□□□ -0.41
PTPN7-202ENST00000367279 MPP6Q9NZW5 540 aa12.48□□□□□ -0.41
PTPN7-202ENST00000367279 AAR2Q9Y312 384 aaKnown RBP12.48□□□□□ -0.41
PTPN7-202ENST00000367279 RBM47A0AV96 593 aaKnown RBP12.48□□□□□ -0.41
PTPN7-202ENST00000367279 PEX1O43933 1283 aa12.48□□□□□ -0.41
PTPN7-202ENST00000367279 F9P00740 461 aa12.48□□□□□ -0.41
PTPN7-202ENST00000367279 SLC4A1P02730 911 aa12.48□□□□□ -0.41
PTPN7-202ENST00000367279 RALGDSQ12967 914 aa12.48□□□□□ -0.41
PTPN7-202ENST00000367279 UGP2Q16851 508 aa12.48□□□□□ -0.41
PTPN7-202ENST00000367279 AGKQ53H12 422 aa12.48□□□□□ -0.41
PTPN7-202ENST00000367279 TRIM67Q6ZTA4 783 aa12.48□□□□□ -0.41
PTPN7-202ENST00000367279 OR6P1Q8NGX9 317 aa12.48□□□□□ -0.41
PTPN7-202ENST00000367279 EME1Q96AY2 570 aa12.48□□□□□ -0.41
PTPN7-202ENST00000367279 MRPL1Q9BYD6 325 aaKnown RBP12.48□□□□□ -0.41
PTPN7-202ENST00000367279 BCAP29Q9UHQ4 241 aa12.48□□□□□ -0.41
PTPN7-202ENST00000367279 PRPF19Q9UMS4 504 aaKnown RBP12.48□□□□□ -0.41
PTPN7-202ENST00000367279 BRCA1P38398 1863 aaKnown RBP12.48□□□□□ -0.41
PTPN7-202ENST00000367279 CRTAMO95727 393 aa12.47□□□□□ -0.41
PTPN7-202ENST00000367279 CLPTM1O96005 669 aa12.47□□□□□ -0.41
PTPN7-202ENST00000367279 POMCP01189 267 aa12.47□□□□□ -0.41
PTPN7-202ENST00000367279 THP07101 528 aa12.47□□□□□ -0.41
PTPN7-202ENST00000367279 DPP6P42658 865 aa12.47□□□□□ -0.41
PTPN7-202ENST00000367279 MAXP61244 160 aa12.47□□□□□ -0.41
PTPN7-202ENST00000367279 RBM20Q5T481 1227 aaKnown RBP12.47□□□□□ -0.41
PTPN7-202ENST00000367279 CNSTQ6PJW8 725 aa12.47□□□□□ -0.41
PTPN7-202ENST00000367279 LSMEM2Q8N112 164 aa12.47□□□□□ -0.41
PTPN7-202ENST00000367279 TXNDC5Q8NBS9 432 aaKnown RBP12.47□□□□□ -0.41
PTPN7-202ENST00000367279 C3orf58Q8NDZ4 430 aa12.47□□□□□ -0.41
PTPN7-202ENST00000367279 STYXQ8WUJ0 223 aa12.47□□□□□ -0.41
PTPN7-202ENST00000367279 PPWD1Q96BP3 646 aaKnown RBP12.47□□□□□ -0.41
PTPN7-202ENST00000367279 VAT1Q99536 393 aa12.47□□□□□ -0.41
PTPN7-202ENST00000367279 C1QTNF1Q9BXJ1 281 aa12.47□□□□□ -0.41
PTPN7-202ENST00000367279 IL1RL2Q9HB29 575 aa12.47□□□□□ -0.41
PTPN7-202ENST00000367279 ZDHHC7Q9NXF8 308 aa12.47□□□□□ -0.41
PTPN7-202ENST00000367279 NSMCE4AQ9NXX6 385 aa12.47□□□□□ -0.41
PTPN7-202ENST00000367279 NCKIPSDQ9NZQ3 722 aa12.47□□□□□ -0.41
PTPN7-202ENST00000367279 C6orf203Q9P0P8 240 aaPredicted RBP12.47□□□□□ -0.41
PTPN7-202ENST00000367279 LZTS1Q9Y250 596 aa12.47□□□□□ -0.41
PTPN7-202ENST00000367279 ZSWIM8A7E2V4 1837 aa12.47□□□□□ -0.41
PTPN7-202ENST00000367279 TTC24A2A3L6 582 aaPredicted RBP12.47□□□□□ -0.41
PTPN7-202ENST00000367279 SEMA3BQ13214 749 aa12.47□□□□□ -0.41
PTPN7-202ENST00000367279 ZNF423Q2M1K9 1284 aa12.47□□□□□ -0.41
PTPN7-202ENST00000367279 PLEKHH3Q7Z736 793 aa12.47□□□□□ -0.41
PTPN7-202ENST00000367279 MFSD6LQ8IWD5 586 aa12.47□□□□□ -0.41
PTPN7-202ENST00000367279 DQX1Q8TE96 717 aaKnown RBP12.47□□□□□ -0.41
PTPN7-202ENST00000367279 PDCD6IPQ8WUM4 868 aaKnown RBP12.47□□□□□ -0.41
PTPN7-202ENST00000367279 NAT14Q8WUY8 206 aa12.47□□□□□ -0.41
PTPN7-202ENST00000367279 ATP6V1E2Q96A05 226 aa12.47□□□□□ -0.41
PTPN7-202ENST00000367279 ISL2Q96A47 359 aa12.47□□□□□ -0.41
PTPN7-202ENST00000367279 SMARCD1Q96GM5 515 aa12.47□□□□□ -0.41
PTPN7-202ENST00000367279 MRPL46Q9H2W6 279 aaKnown RBP12.47□□□□□ -0.41
PTPN7-202ENST00000367279 GNEQ9Y223 722 aaKnown RBP12.47□□□□□ -0.41
PTPN7-202ENST00000367279 CEP350Q5VT06 3117 aa12.47□□□□□ -0.41
PTPN7-202ENST00000367279 B3GAT3O94766 335 aa12.47□□□□□ -0.41
PTPN7-202ENST00000367279 BRCC3P46736 316 aa12.47□□□□□ -0.41
PTPN7-202ENST00000367279 CD151P48509 253 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms