RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 FFAR2O15552 330 aa12.66□□□□□ -0.38
MRPL55-209ENST00000366735 PIAS2O75928 621 aa12.66□□□□□ -0.38
MRPL55-209ENST00000366735 ERBB2P04626 1255 aa12.66□□□□□ -0.38
MRPL55-209ENST00000366735 CKMT1AP12532 417 aa12.66□□□□□ -0.38
MRPL55-209ENST00000366735 PRLRP16471 622 aa12.66□□□□□ -0.38
MRPL55-209ENST00000366735 ITPKBP27987 946 aa12.66□□□□□ -0.38
MRPL55-209ENST00000366735 OR1E1P30953 314 aa12.66□□□□□ -0.38
MRPL55-209ENST00000366735 CASP14P31944 242 aa12.66□□□□□ -0.38
MRPL55-209ENST00000366735 SCNN1AP37088 669 aa12.66□□□□□ -0.38
MRPL55-209ENST00000366735 GGCXP38435 758 aa12.66□□□□□ -0.38
MRPL55-209ENST00000366735 NEK3P51956 506 aa12.66□□□□□ -0.38
MRPL55-209ENST00000366735 DEUP1Q05D60 604 aa12.66□□□□□ -0.38
MRPL55-209ENST00000366735 ZNF783Q6ZMS7 281 aa12.66□□□□□ -0.38
MRPL55-209ENST00000366735 TMEM139Q8IV31 216 aa12.66□□□□□ -0.38
MRPL55-209ENST00000366735 TMEM35BQ8NCS4 154 aa12.66□□□□□ -0.38
MRPL55-209ENST00000366735 OR2A12Q8NGT7 310 aa12.66□□□□□ -0.38
MRPL55-209ENST00000366735 GRIN3AQ8TCU5 1115 aa12.66□□□□□ -0.38
MRPL55-209ENST00000366735 PGAP3Q96FM1 320 aaPredicted RBP12.66□□□□□ -0.38
MRPL55-209ENST00000366735 DNAJC7Q99615 494 aa12.66□□□□□ -0.38
MRPL55-209ENST00000366735 NAA15Q9BXJ9 866 aaKnown RBP12.66□□□□□ -0.38
MRPL55-209ENST00000366735 HDAC8Q9BY41 377 aa12.66□□□□□ -0.38
MRPL55-209ENST00000366735 CEP44Q9C0F1 390 aa12.66□□□□□ -0.38
MRPL55-209ENST00000366735 ABCG4Q9H172 646 aa12.66□□□□□ -0.38
MRPL55-209ENST00000366735 ACP6Q9NPH0 428 aa12.66□□□□□ -0.38
MRPL55-209ENST00000366735 KCND1Q9NSA2 647 aa12.66□□□□□ -0.38
MRPL55-209ENST00000366735 PIGVQ9NUD9 493 aa12.66□□□□□ -0.38
MRPL55-209ENST00000366735 PYCARDQ9ULZ3 195 aa12.66□□□□□ -0.38
MRPL55-209ENST00000366735 LUC7L2Q9Y383 392 aaKnown RBP12.66□□□□□ -0.38
MRPL55-209ENST00000366735 BPTFQ12830 3046 aa12.66□□□□□ -0.38
MRPL55-209ENST00000366735 TRIM38O00635 465 aa12.65□□□□□ -0.38
MRPL55-209ENST00000366735 CTSLP07711 333 aa12.65□□□□□ -0.38
MRPL55-209ENST00000366735 SLC9A1P19634 815 aa12.65□□□□□ -0.38
MRPL55-209ENST00000366735 RRM1P23921 792 aa12.65□□□□□ -0.38
MRPL55-209ENST00000366735 ETFBP38117 255 aa12.65□□□□□ -0.38
MRPL55-209ENST00000366735 CXCR3P49682 368 aa12.65□□□□□ -0.38
MRPL55-209ENST00000366735 IRAK1P51617 712 aa12.65□□□□□ -0.38
MRPL55-209ENST00000366735 ADKP55263 362 aaKnown RBP12.65□□□□□ -0.38
MRPL55-209ENST00000366735 GEMIN4P57678 1058 aaKnown RBP12.65□□□□□ -0.38
MRPL55-209ENST00000366735 TMPRSS3P57727 454 aa12.65□□□□□ -0.38
MRPL55-209ENST00000366735 TAS2R38P59533 333 aa12.65□□□□□ -0.38
MRPL55-209ENST00000366735 RPS21P63220 83 aaKnown RBP12.65□□□□□ -0.38
MRPL55-209ENST00000366735 ZBED6P86452 979 aa12.65□□□□□ -0.38
MRPL55-209ENST00000366735 SLC20A2Q08357 652 aa12.65□□□□□ -0.38
MRPL55-209ENST00000366735 ZNF284Q2VY69 593 aa12.65□□□□□ -0.38
MRPL55-209ENST00000366735 PTPN20Q4JDL3 420 aa12.65□□□□□ -0.38
MRPL55-209ENST00000366735 FAM102AQ5T9C2 384 aaPredicted RBP12.65□□□□□ -0.38
MRPL55-209ENST00000366735 GJB7Q6PEY0 223 aa12.65□□□□□ -0.38
MRPL55-209ENST00000366735 KYAT3Q6YP21 454 aaKnown RBP12.65□□□□□ -0.38
MRPL55-209ENST00000366735 ABI3BPQ7Z7G0 1075 aa12.65□□□□□ -0.38
MRPL55-209ENST00000366735 PCDH20Q8N6Y1 951 aaKnown RBP12.65□□□□□ -0.38
MRPL55-209ENST00000366735 OR13H1Q8NG92 308 aa12.65□□□□□ -0.38
MRPL55-209ENST00000366735 OR8K1Q8NGG5 319 aa12.65□□□□□ -0.38
MRPL55-209ENST00000366735 OR52K2Q8NGK3 314 aa12.65□□□□□ -0.38
MRPL55-209ENST00000366735 KLK6Q92876 244 aa12.65□□□□□ -0.38
MRPL55-209ENST00000366735 C1orf74Q96LT6 269 aa12.65□□□□□ -0.38
MRPL55-209ENST00000366735 PSMB7Q99436 277 aa12.65□□□□□ -0.38
MRPL55-209ENST00000366735 NPY6RQ99463 290 aa12.65□□□□□ -0.38
MRPL55-209ENST00000366735 BAG1Q99933 345 aaPredicted RBP12.65□□□□□ -0.38
MRPL55-209ENST00000366735 FZD3Q9NPG1 666 aa12.65□□□□□ -0.38
MRPL55-209ENST00000366735 PLCB1Q9NQ66 1216 aa12.65□□□□□ -0.38
MRPL55-209ENST00000366735 DNAJC28Q9NX36 388 aa12.65□□□□□ -0.38
MRPL55-209ENST00000366735 CA5BQ9Y2D0 317 aa12.65□□□□□ -0.38
MRPL55-209ENST00000366735 HS3ST3A1Q9Y663 406 aa12.65□□□□□ -0.38
MRPL55-209ENST00000366735 ANKRD36A6QL64 1941 aa12.64□□□□□ -0.39
MRPL55-209ENST00000366735 ILVBLA1L0T0 632 aa12.64□□□□□ -0.39
MRPL55-209ENST00000366735 ARHGAP6O43182 974 aa12.64□□□□□ -0.39
MRPL55-209ENST00000366735 SNAP91O60641 907 aa12.64□□□□□ -0.39
MRPL55-209ENST00000366735 CNTN5O94779 1100 aa12.64□□□□□ -0.39
MRPL55-209ENST00000366735 ITGB7P26010 798 aa12.64□□□□□ -0.39
MRPL55-209ENST00000366735 PON1P27169 355 aa12.64□□□□□ -0.39
MRPL55-209ENST00000366735 HNRNPH3P31942 346 aaKnown RBP12.64□□□□□ -0.39
MRPL55-209ENST00000366735 RABIFP47224 123 aa12.64□□□□□ -0.39
MRPL55-209ENST00000366735 SERPINH1P50454 418 aaKnown RBP12.64□□□□□ -0.39
MRPL55-209ENST00000366735 RNASE9P60153 205 aaKnown RBP12.64□□□□□ -0.39
MRPL55-209ENST00000366735 CXADRP78310 365 aa12.64□□□□□ -0.39
MRPL55-209ENST00000366735 SLC25A52Q3SY17 297 aa12.64□□□□□ -0.39
MRPL55-209ENST00000366735 ARSIQ5FYB1 569 aa12.64□□□□□ -0.39
MRPL55-209ENST00000366735 ZCCHC8Q6NZY4 707 aaKnown RBP12.64□□□□□ -0.39
MRPL55-209ENST00000366735 GCNT7Q6ZNI0 430 aa12.64□□□□□ -0.39
MRPL55-209ENST00000366735 TFAP2DQ7Z6R9 452 aa12.64□□□□□ -0.39
MRPL55-209ENST00000366735 C14orf80Q86SX3 495 aa12.64□□□□□ -0.39
MRPL55-209ENST00000366735 PARGQ86W56 976 aa12.64□□□□□ -0.39
MRPL55-209ENST00000366735 SLC25A45Q8N413 288 aa12.64□□□□□ -0.39
MRPL55-209ENST00000366735 WDTC1Q8N5D0 677 aa12.64□□□□□ -0.39
MRPL55-209ENST00000366735 FAM181AQ8N9Y4 354 aa12.64□□□□□ -0.39
MRPL55-209ENST00000366735 NEK11Q8NG66 645 aa12.64□□□□□ -0.39
MRPL55-209ENST00000366735 CPLX3Q8WVH0 158 aa12.64□□□□□ -0.39
MRPL55-209ENST00000366735 ARRDC3Q96B67 414 aa12.64□□□□□ -0.39
MRPL55-209ENST00000366735 GRAMD1AQ96CP6 724 aa12.64□□□□□ -0.39
MRPL55-209ENST00000366735 ARHGEF26Q96DR7 871 aa12.64□□□□□ -0.39
MRPL55-209ENST00000366735 FEM1CQ96JP0 617 aa12.64□□□□□ -0.39
MRPL55-209ENST00000366735 ATP13A1Q9HD20 1204 aa12.64□□□□□ -0.39
MRPL55-209ENST00000366735 SPTLC3Q9NUV7 552 aa12.64□□□□□ -0.39
MRPL55-209ENST00000366735 IPO11Q9UI26 975 aaKnown RBP12.64□□□□□ -0.39
MRPL55-209ENST00000366735 DNAJC12Q9UKB3 198 aa12.64□□□□□ -0.39
MRPL55-209ENST00000366735 DAAM1Q9Y4D1 1078 aa12.64□□□□□ -0.39
MRPL55-209ENST00000366735 LRRK1Q38SD2 2015 aa12.64□□□□□ -0.39
MRPL55-209ENST00000366735 ASXL3Q9C0F0 2248 aa12.64□□□□□ -0.39
MRPL55-209ENST00000366735 COL27A1Q8IZC6 1860 aaPredicted RBP12.63□□□□□ -0.39
MRPL55-209ENST00000366735 CXorf51AA0A1B0GTR3 108 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms