RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 ALDH16A1Q8IZ83 802 aa19.88■□□□□ 0.77
TRIM58-201ENST00000366481 TMEM102Q8N9M5 508 aaPredicted RBP19.88■□□□□ 0.77
TRIM58-201ENST00000366481 OLAHQ9NV23 265 aa19.88■□□□□ 0.77
TRIM58-201ENST00000366481 KANSL1LA0AUZ9 987 aa19.88■□□□□ 0.77
TRIM58-201ENST00000366481 KCNU1A8MYU2 1149 aa19.88■□□□□ 0.77
TRIM58-201ENST00000366481 ATE1O95260 518 aa19.88■□□□□ 0.77
TRIM58-201ENST00000366481 BCAP31P51572 246 aa19.88■□□□□ 0.77
TRIM58-201ENST00000366481 GRIK4Q16099 956 aa19.88■□□□□ 0.77
TRIM58-201ENST00000366481 TRIM16LQ309B1 348 aa19.88■□□□□ 0.77
TRIM58-201ENST00000366481 FGD3Q5JSP0 725 aa19.88■□□□□ 0.77
TRIM58-201ENST00000366481 FAM219BQ5XKK7 198 aa19.88■□□□□ 0.77
TRIM58-201ENST00000366481 TMEM26Q6ZUK4 368 aa19.88■□□□□ 0.77
TRIM58-201ENST00000366481 FIBCD1Q8N539 461 aa19.88■□□□□ 0.77
TRIM58-201ENST00000366481 DNAAF3Q8N9W5 541 aa19.88■□□□□ 0.77
TRIM58-201ENST00000366481 CASP10Q92851 521 aa19.88■□□□□ 0.77
TRIM58-201ENST00000366481 RTP4Q96DX8 246 aa19.88■□□□□ 0.77
TRIM58-201ENST00000366481 FAM149AA5PLN7 773 aa19.87■□□□□ 0.77
TRIM58-201ENST00000366481 HOXA11P31270 313 aaPredicted RBP19.87■□□□□ 0.77
TRIM58-201ENST00000366481 RPL14P50914 215 aaKnown RBP19.87■□□□□ 0.77
TRIM58-201ENST00000366481 KPNA1P52294 538 aaPredicted RBP19.87■□□□□ 0.77
TRIM58-201ENST00000366481 PSME3P61289 254 aa19.87■□□□□ 0.77
TRIM58-201ENST00000366481 GNA12Q03113 381 aa19.87■□□□□ 0.77
TRIM58-201ENST00000366481 C9orf131Q5VYM1 1079 aa19.87■□□□□ 0.77
TRIM58-201ENST00000366481 GPR180Q86V85 440 aa19.87■□□□□ 0.77
TRIM58-201ENST00000366481 PIGZQ86VD9 579 aa19.87■□□□□ 0.77
TRIM58-201ENST00000366481 TICAM1Q8IUC6 712 aa19.87■□□□□ 0.77
TRIM58-201ENST00000366481 SIX6OS1Q8N1H7 587 aa19.87■□□□□ 0.77
TRIM58-201ENST00000366481 LPGAT1Q92604 370 aa19.87■□□□□ 0.77
TRIM58-201ENST00000366481 ZNF669Q96BR6 464 aaPredicted RBP19.87■□□□□ 0.77
TRIM58-201ENST00000366481 FCRL3Q96P31 734 aaPredicted RBP19.87■□□□□ 0.77
TRIM58-201ENST00000366481 VPS45Q9NRW7 570 aa19.87■□□□□ 0.77
TRIM58-201ENST00000366481 GID8Q9NWU2 228 aa19.87■□□□□ 0.77
TRIM58-201ENST00000366481 A0A0G2JLL6 359 aaPredicted RBP19.87■□□□□ 0.77
TRIM58-201ENST00000366481 M0QYT0 321 aa19.87■□□□□ 0.77
TRIM58-201ENST00000366481 MDM4O15151 490 aa19.87■□□□□ 0.77
TRIM58-201ENST00000366481 GCATO75600 419 aa19.87■□□□□ 0.77
TRIM58-201ENST00000366481 GNAO1P09471 354 aa19.87■□□□□ 0.77
TRIM58-201ENST00000366481 DPYSL2Q16555 572 aa19.87■□□□□ 0.77
TRIM58-201ENST00000366481 CCDC153Q494R4 210 aa19.87■□□□□ 0.77
TRIM58-201ENST00000366481 ARL13AQ5H913 290 aaPredicted RBP19.87■□□□□ 0.77
TRIM58-201ENST00000366481 PRAMEF19Q5SWL8 479 aa19.87■□□□□ 0.77
TRIM58-201ENST00000366481 KDELC2Q7Z4H8 507 aa19.87■□□□□ 0.77
TRIM58-201ENST00000366481 PRRT2Q7Z6L0 340 aaPredicted RBP19.87■□□□□ 0.77
TRIM58-201ENST00000366481 EXOC8Q8IYI6 725 aa19.87■□□□□ 0.77
TRIM58-201ENST00000366481 SPATA6LQ8N4H0 392 aa19.87■□□□□ 0.77
TRIM58-201ENST00000366481 ARNTL2Q8WYA1 636 aa19.87■□□□□ 0.77
TRIM58-201ENST00000366481 IL1RL2Q9HB29 575 aa19.87■□□□□ 0.77
TRIM58-201ENST00000366481 NMRAL1Q9HBL8 299 aa19.87■□□□□ 0.77
TRIM58-201ENST00000366481 GTSE1Q9NYZ3 720 aa19.87■□□□□ 0.77
TRIM58-201ENST00000366481 MOCS1Q9NZB8 636 aa19.87■□□□□ 0.77
TRIM58-201ENST00000366481 SLC39A10Q9ULF5 831 aa19.87■□□□□ 0.77
TRIM58-201ENST00000366481 TRIM38O00635 465 aa19.87■□□□□ 0.77
TRIM58-201ENST00000366481 KDM1AO60341 852 aa19.87■□□□□ 0.77
TRIM58-201ENST00000366481 MT-CO1P00395 513 aa19.87■□□□□ 0.77
TRIM58-201ENST00000366481 TFEBP19484 476 aa19.87■□□□□ 0.77
TRIM58-201ENST00000366481 ALDH3B2P48448 385 aa19.87■□□□□ 0.77
TRIM58-201ENST00000366481 BTG3Q14201 252 aaPredicted RBP19.87■□□□□ 0.77
TRIM58-201ENST00000366481 DGKDQ16760 1214 aa19.87■□□□□ 0.77
TRIM58-201ENST00000366481 DCDC5Q6ZRR9 648 aa19.87■□□□□ 0.77
TRIM58-201ENST00000366481 CHST15Q7LFX5 561 aaPredicted RBP19.87■□□□□ 0.77
TRIM58-201ENST00000366481 PNPLA1Q8N8W4 532 aa19.87■□□□□ 0.77
TRIM58-201ENST00000366481 MCUQ8NE86 351 aa19.87■□□□□ 0.77
TRIM58-201ENST00000366481 MFSD3Q96ES6 412 aa19.87■□□□□ 0.77
TRIM58-201ENST00000366481 SGF29Q96ES7 293 aa19.87■□□□□ 0.77
TRIM58-201ENST00000366481 KLHL8Q9P2G9 620 aaPredicted RBP19.87■□□□□ 0.77
TRIM58-201ENST00000366481 TLK1Q9UKI8 766 aa19.87■□□□□ 0.77
TRIM58-201ENST00000366481 DNAJC25-GNG10A0A024R161 153 aa19.86■□□□□ 0.77
TRIM58-201ENST00000366481 FUCA1P04066 466 aa19.86■□□□□ 0.77
TRIM58-201ENST00000366481 AVPR1AP37288 418 aa19.86■□□□□ 0.77
TRIM58-201ENST00000366481 GP5P40197 560 aa19.86■□□□□ 0.77
TRIM58-201ENST00000366481 GRIA4P48058 902 aa19.86■□□□□ 0.77
TRIM58-201ENST00000366481 LDLRAP1Q5SW96 308 aa19.86■□□□□ 0.77
TRIM58-201ENST00000366481 ZNF567Q8N184 647 aa19.86■□□□□ 0.77
TRIM58-201ENST00000366481 USP33Q8TEY7 942 aa19.86■□□□□ 0.77
TRIM58-201ENST00000366481 QKIQ96PU8 341 aaKnown RBP eCLIP19.86■□□□□ 0.772e-6■■■■□ 22.3
TRIM58-201ENST00000366481 C16orf70Q9BSU1 422 aa19.86■□□□□ 0.77
TRIM58-201ENST00000366481 VRTNQ9H8Y1 702 aa19.86■□□□□ 0.77
TRIM58-201ENST00000366481 SLC38A7Q9NVC3 462 aa19.86■□□□□ 0.77
TRIM58-201ENST00000366481 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.86■□□□□ 0.77
TRIM58-201ENST00000366481 CCDC167Q9P0B6 97 aa19.86■□□□□ 0.77
TRIM58-201ENST00000366481 A0A0A0MRY4 1105 aa19.86■□□□□ 0.77
TRIM58-201ENST00000366481 HTRA2O43464 458 aaPredicted RBP19.86■□□□□ 0.77
TRIM58-201ENST00000366481 ZNF24P17028 368 aa19.86■□□□□ 0.77
TRIM58-201ENST00000366481 MAGEA3P43357 314 aa19.86■□□□□ 0.77
TRIM58-201ENST00000366481 SOX4Q06945 474 aaPredicted RBP19.86■□□□□ 0.77
TRIM58-201ENST00000366481 ZNF829Q3KNS6 432 aaPredicted RBP19.86■□□□□ 0.77
TRIM58-201ENST00000366481 ZBED5Q49AG3 693 aa19.86■□□□□ 0.77
TRIM58-201ENST00000366481 PITRM1Q5JRX3 1037 aa19.86■□□□□ 0.77
TRIM58-201ENST00000366481 MARCH8Q5T0T0 291 aa19.86■□□□□ 0.77
TRIM58-201ENST00000366481 TMEM126BQ8IUX1 230 aa19.86■□□□□ 0.77
TRIM58-201ENST00000366481 SLC35B4Q969S0 331 aa19.86■□□□□ 0.77
TRIM58-201ENST00000366481 SPATA13Q96N96 652 aa19.86■□□□□ 0.77
TRIM58-201ENST00000366481 RANBP9Q96S59 729 aa19.86■□□□□ 0.77
TRIM58-201ENST00000366481 UPF3AQ9H1J1 476 aaKnown RBP19.86■□□□□ 0.77
TRIM58-201ENST00000366481 SNX25Q9H3E2 840 aa19.86■□□□□ 0.77
TRIM58-201ENST00000366481 HIPK3Q9H422 1215 aa19.86■□□□□ 0.77
TRIM58-201ENST00000366481 ANK1P16157 1881 aa19.86■□□□□ 0.77
TRIM58-201ENST00000366481 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.85■□□□□ 0.77
TRIM58-201ENST00000366481 TK2O00142 265 aa19.85■□□□□ 0.77
TRIM58-201ENST00000366481 HDCP19113 662 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms