RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 RHOAP61586 193 aa13.34□□□□□ -0.27
SRGAP3-201ENST00000360413 RIPK1Q13546 671 aa13.34□□□□□ -0.27
SRGAP3-201ENST00000360413 SPDYCQ5MJ68 293 aa13.34□□□□□ -0.27
SRGAP3-201ENST00000360413 KCNS3Q9BQ31 491 aa13.34□□□□□ -0.27
SRGAP3-201ENST00000360413 OSGEPQ9NPF4 335 aa13.34□□□□□ -0.27
SRGAP3-201ENST00000360413 DCP1AQ9NPI6 582 aaPredicted RBP13.34□□□□□ -0.27
SRGAP3-201ENST00000360413 ABCG2Q9UNQ0 655 aa13.34□□□□□ -0.27
SRGAP3-201ENST00000360413 SHOC2Q9UQ13 582 aa13.34□□□□□ -0.27
SRGAP3-201ENST00000360413 CPDO75976 1380 aa13.34□□□□□ -0.27
SRGAP3-201ENST00000360413 ZBTB14O43829 449 aa13.34□□□□□ -0.27
SRGAP3-201ENST00000360413 THP07101 528 aa13.34□□□□□ -0.27
SRGAP3-201ENST00000360413 MAZP56270 477 aaKnown RBP13.34□□□□□ -0.27
SRGAP3-201ENST00000360413 ZNF621Q6ZSS3 439 aa13.34□□□□□ -0.27
SRGAP3-201ENST00000360413 OFCC1Q8IZS5 231 aa13.34□□□□□ -0.27
SRGAP3-201ENST00000360413 CKAP2Q8WWK9 683 aa13.34□□□□□ -0.27
SRGAP3-201ENST00000360413 MARK4Q96L34 752 aa13.34□□□□□ -0.27
SRGAP3-201ENST00000360413 CPNE1Q99829 537 aa13.34□□□□□ -0.27
SRGAP3-201ENST00000360413 MAP1BP46821 2468 aaKnown RBP13.34□□□□□ -0.27
SRGAP3-201ENST00000360413 LTFP02788 710 aa13.34□□□□□ -0.27
SRGAP3-201ENST00000360413 THRBP10828 461 aa13.34□□□□□ -0.27
SRGAP3-201ENST00000360413 SUZ12Q15022 739 aaKnown RBP13.34□□□□□ -0.27
SRGAP3-201ENST00000360413 VPS45Q9NRW7 570 aa13.34□□□□□ -0.27
SRGAP3-201ENST00000360413 AXIN2Q9Y2T1 843 aa13.34□□□□□ -0.27
SRGAP3-201ENST00000360413 H3BUI4 141 aa13.34□□□□□ -0.27
SRGAP3-201ENST00000360413 SEC22BO75396 215 aa13.34□□□□□ -0.27
SRGAP3-201ENST00000360413 ZBTB11O95625 1053 aaPredicted RBP13.34□□□□□ -0.27
SRGAP3-201ENST00000360413 IGSF6O95976 241 aa13.34□□□□□ -0.27
SRGAP3-201ENST00000360413 PHC1P78364 1004 aa13.34□□□□□ -0.27
SRGAP3-201ENST00000360413 XIAPP98170 497 aa13.34□□□□□ -0.27
SRGAP3-201ENST00000360413 PRKCEQ02156 737 aa13.34□□□□□ -0.27
SRGAP3-201ENST00000360413 TSGA10IPQ3SY00 556 aa13.34□□□□□ -0.27
SRGAP3-201ENST00000360413 SGPL1O95470 568 aa13.34□□□□□ -0.27
SRGAP3-201ENST00000360413 CCR1P32246 355 aa13.34□□□□□ -0.27
SRGAP3-201ENST00000360413 CLK2P49760 499 aaKnown RBP13.34□□□□□ -0.27
SRGAP3-201ENST00000360413 CCR4P51679 360 aa13.34□□□□□ -0.27
SRGAP3-201ENST00000360413 MPP2Q14168 576 aa13.34□□□□□ -0.27
SRGAP3-201ENST00000360413 HDAC7Q8WUI4 952 aa13.34□□□□□ -0.27
SRGAP3-201ENST00000360413 PCDH9Q9HC56 1237 aa13.34□□□□□ -0.27
SRGAP3-201ENST00000360413 FAM205CA6NFA0 338 aa13.33□□□□□ -0.27
SRGAP3-201ENST00000360413 AP3S2P59780 193 aa13.33□□□□□ -0.27
SRGAP3-201ENST00000360413 RFX4Q33E94 735 aa13.33□□□□□ -0.27
SRGAP3-201ENST00000360413 RBM43Q6ZSC3 357 aaKnown RBP13.33□□□□□ -0.27
SRGAP3-201ENST00000360413 R3HCC1LQ7Z5L2 792 aaKnown RBP13.33□□□□□ -0.27
SRGAP3-201ENST00000360413 SLC44A5Q8NCS7 719 aa13.33□□□□□ -0.27
SRGAP3-201ENST00000360413 SLC9A6Q92581 669 aa13.33□□□□□ -0.27
SRGAP3-201ENST00000360413 TRHDEQ9UKU6 1024 aa13.33□□□□□ -0.27
SRGAP3-201ENST00000360413 N6AMT1Q9Y5N5 214 aa13.33□□□□□ -0.27
SRGAP3-201ENST00000360413 RNF17Q9BXT8 1623 aaKnown RBP13.33□□□□□ -0.27
SRGAP3-201ENST00000360413 TRMT11Q7Z4G4 463 aaKnown RBP13.33□□□□□ -0.28
SRGAP3-201ENST00000360413 NEDD1Q8NHV4 660 aa13.33□□□□□ -0.28
SRGAP3-201ENST00000360413 PGM2Q96G03 612 aa13.33□□□□□ -0.28
SRGAP3-201ENST00000360413 PPIEQ9UNP9 301 aaKnown RBP13.33□□□□□ -0.28
SRGAP3-201ENST00000360413 MINPP1Q9UNW1 487 aa13.33□□□□□ -0.28
SRGAP3-201ENST00000360413 H3BNX3 289 aa13.33□□□□□ -0.28
SRGAP3-201ENST00000360413 PGRMC2O15173 223 aa13.33□□□□□ -0.28
SRGAP3-201ENST00000360413 USP12O75317 370 aa13.33□□□□□ -0.28
SRGAP3-201ENST00000360413 CCNE2O96020 404 aa13.33□□□□□ -0.28
SRGAP3-201ENST00000360413 ZNF12P17014 697 aa13.33□□□□□ -0.28
SRGAP3-201ENST00000360413 DEFA5Q01523 94 aa13.33□□□□□ -0.28
SRGAP3-201ENST00000360413 UBAP2LQ14157 1087 aaKnown RBP13.33□□□□□ -0.28
SRGAP3-201ENST00000360413 TMEM143Q96AN5 459 aa13.33□□□□□ -0.28
SRGAP3-201ENST00000360413 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.33□□□□□ -0.28
SRGAP3-201ENST00000360413 SQORQ9Y6N5 450 aa13.33□□□□□ -0.28
SRGAP3-201ENST00000360413 METTL21EPA6NDL7 271 aa13.33□□□□□ -0.28
SRGAP3-201ENST00000360413 TIPRLO75663 272 aa13.33□□□□□ -0.28
SRGAP3-201ENST00000360413 ELK3P41970 407 aa13.33□□□□□ -0.28
SRGAP3-201ENST00000360413 ALDH3A2P51648 485 aa13.33□□□□□ -0.28
SRGAP3-201ENST00000360413 ABRQ12979 859 aa13.33□□□□□ -0.28
SRGAP3-201ENST00000360413 MYBPC3Q14896 1274 aa13.33□□□□□ -0.28
SRGAP3-201ENST00000360413 LDLRAP1Q5SW96 308 aa13.33□□□□□ -0.28
SRGAP3-201ENST00000360413 TSEN2Q8NCE0 465 aaKnown RBP13.33□□□□□ -0.28
SRGAP3-201ENST00000360413 TAMM41Q96BW9 452 aa13.33□□□□□ -0.28
SRGAP3-201ENST00000360413 LACRTQ9GZZ8 138 aa13.33□□□□□ -0.28
SRGAP3-201ENST00000360413 MROH8Q9H579 483 aa13.33□□□□□ -0.28
SRGAP3-201ENST00000360413 ZNF446Q9NWS9 450 aa13.33□□□□□ -0.28
SRGAP3-201ENST00000360413 MORF4L1Q9UBU8 362 aa13.33□□□□□ -0.28
SRGAP3-201ENST00000360413 CTSEP14091 401 aa13.33□□□□□ -0.28
SRGAP3-201ENST00000360413 NAMPTP43490 491 aa13.33□□□□□ -0.28
SRGAP3-201ENST00000360413 RFTN2Q52LD8 501 aaPredicted RBP13.33□□□□□ -0.28
SRGAP3-201ENST00000360413 SH2D3AQ9BRG2 576 aa13.33□□□□□ -0.28
SRGAP3-201ENST00000360413 A0A087X1B8 175 aa13.33□□□□□ -0.28
SRGAP3-201ENST00000360413 IFNGP01579 166 aa13.33□□□□□ -0.28
SRGAP3-201ENST00000360413 BMP7P18075 431 aa13.33□□□□□ -0.28
SRGAP3-201ENST00000360413 MTAPQ13126 283 aa13.33□□□□□ -0.28
SRGAP3-201ENST00000360413 PABPC1LQ4VXU2 614 aaKnown RBP13.33□□□□□ -0.28
SRGAP3-201ENST00000360413 C1orf189Q5VU69 101 aa13.33□□□□□ -0.28
SRGAP3-201ENST00000360413 SPAG16Q8N0X2 631 aa13.33□□□□□ -0.28
SRGAP3-201ENST00000360413 VPS35Q96QK1 796 aa13.33□□□□□ -0.28
SRGAP3-201ENST00000360413 GFM1Q96RP9 751 aaKnown RBP13.33□□□□□ -0.28
SRGAP3-201ENST00000360413 POMKQ9H5K3 350 aa13.33□□□□□ -0.28
SRGAP3-201ENST00000360413 SNX6Q9UNH7 406 aa13.33□□□□□ -0.28
SRGAP3-201ENST00000360413 MYH1P12882 1939 aa13.33□□□□□ -0.28
SRGAP3-201ENST00000360413 MYH2Q9UKX2 1941 aa13.33□□□□□ -0.28
SRGAP3-201ENST00000360413 MYH4Q9Y623 1939 aa13.33□□□□□ -0.28
SRGAP3-201ENST00000360413 ZMPSTE24O75844 475 aa13.33□□□□□ -0.28
SRGAP3-201ENST00000360413 SSTR1P30872 391 aa13.33□□□□□ -0.28
SRGAP3-201ENST00000360413 CUL2Q13617 745 aa13.33□□□□□ -0.28
SRGAP3-201ENST00000360413 NOL9Q5SY16 702 aaKnown RBP13.33□□□□□ -0.28
SRGAP3-201ENST00000360413 HMBOX1Q6NT76 420 aa13.33□□□□□ -0.28
SRGAP3-201ENST00000360413 TXNDC11Q6PKC3 985 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms