RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 ETNPPLQ8TBG4 499 aa16.19■□□□□ 0.18
COL18A1-203ENST00000359759 SPAG4Q9NPE6 437 aa16.19■□□□□ 0.18
COL18A1-203ENST00000359759 SOHLH2Q9NX45 425 aa16.19■□□□□ 0.18
COL18A1-203ENST00000359759 MAP3K4Q9Y6R4 1608 aa16.19■□□□□ 0.18
COL18A1-203ENST00000359759 S100A6P06703 90 aa16.19■□□□□ 0.18
COL18A1-203ENST00000359759 PSME3P61289 254 aa16.19■□□□□ 0.18
COL18A1-203ENST00000359759 KCNA10Q16322 511 aa16.19■□□□□ 0.18
COL18A1-203ENST00000359759 NOL9Q5SY16 702 aaKnown RBP16.19■□□□□ 0.18
COL18A1-203ENST00000359759 GALNT5Q7Z7M9 940 aa16.19■□□□□ 0.18
COL18A1-203ENST00000359759 KBTBD7Q8WVZ9 684 aa16.19■□□□□ 0.18
COL18A1-203ENST00000359759 STARD8Q92502 1023 aa16.19■□□□□ 0.18
COL18A1-203ENST00000359759 NELL1Q92832 810 aa16.19■□□□□ 0.18
COL18A1-203ENST00000359759 PANX3Q96QZ0 392 aa16.19■□□□□ 0.18
COL18A1-203ENST00000359759 PMF1-BGLAPU3KQ54 211 aa16.19■□□□□ 0.18
COL18A1-203ENST00000359759 TNS3Q68CZ2 1445 aa16.18■□□□□ 0.18
COL18A1-203ENST00000359759 STX16-NPEPL1H3BU86 382 aa16.18■□□□□ 0.18
COL18A1-203ENST00000359759 STX16O14662 325 aa16.18■□□□□ 0.18
COL18A1-203ENST00000359759 BDNFP23560 247 aa16.18■□□□□ 0.18
COL18A1-203ENST00000359759 KLRC2P26717 231 aa16.18■□□□□ 0.18
COL18A1-203ENST00000359759 C15orf59Q2T9L4 293 aaPredicted RBP16.18■□□□□ 0.18
COL18A1-203ENST00000359759 DHDDSQ86SQ9 333 aa16.18■□□□□ 0.18
COL18A1-203ENST00000359759 ITIH5Q86UX2 942 aa16.18■□□□□ 0.18
COL18A1-203ENST00000359759 PHF10Q8WUB8 498 aaKnown RBP16.18■□□□□ 0.18
COL18A1-203ENST00000359759 COX4I2Q96KJ9 171 aa16.18■□□□□ 0.18
COL18A1-203ENST00000359759 GSDMCQ9BYG8 508 aa16.18■□□□□ 0.18
COL18A1-203ENST00000359759 E5RJQ4 531 aa16.18■□□□□ 0.18
COL18A1-203ENST00000359759 F8VP50 259 aa16.18■□□□□ 0.18
COL18A1-203ENST00000359759 DGKAP23743 735 aa16.18■□□□□ 0.18
COL18A1-203ENST00000359759 TGFBR2P37173 567 aa16.18■□□□□ 0.18
COL18A1-203ENST00000359759 ZNF846Q147U1 533 aa16.18■□□□□ 0.18
COL18A1-203ENST00000359759 INSCQ1MX18 579 aa16.18■□□□□ 0.18
COL18A1-203ENST00000359759 ARMC12Q5T9G4 340 aa16.18■□□□□ 0.18
COL18A1-203ENST00000359759 FBXO33Q7Z6M2 555 aa16.18■□□□□ 0.18
COL18A1-203ENST00000359759 TP53INP1Q96A56 240 aa16.18■□□□□ 0.18
COL18A1-203ENST00000359759 TBC1D10AQ9BXI6 508 aa16.18■□□□□ 0.18
COL18A1-203ENST00000359759 DGKBQ9Y6T7 804 aa16.18■□□□□ 0.18
COL18A1-203ENST00000359759 C15orf38-AP3S2A0A0A6YYH1 394 aa16.18■□□□□ 0.18
COL18A1-203ENST00000359759 A0A0U1RQJ8 604 aa16.18■□□□□ 0.18
COL18A1-203ENST00000359759 CCDC162PA2VCL2 907 aa16.18■□□□□ 0.18
COL18A1-203ENST00000359759 ZNF879B4DU55 563 aa16.18■□□□□ 0.18
COL18A1-203ENST00000359759 NR2F1P10589 423 aa16.18■□□□□ 0.18
COL18A1-203ENST00000359759 HSPA14Q0VDF9 509 aa16.18■□□□□ 0.18
COL18A1-203ENST00000359759 MTX3Q5HYI7 312 aa16.18■□□□□ 0.18
COL18A1-203ENST00000359759 CDKAL1Q5VV42 579 aa16.18■□□□□ 0.18
COL18A1-203ENST00000359759 PACS1Q6VY07 963 aa16.18■□□□□ 0.18
COL18A1-203ENST00000359759 ARPINQ7Z6K5 226 aa16.18■□□□□ 0.18
COL18A1-203ENST00000359759 ZNF655Q8N720 491 aaPredicted RBP16.18■□□□□ 0.18
COL18A1-203ENST00000359759 ZNF354BQ96LW1 612 aa16.18■□□□□ 0.18
COL18A1-203ENST00000359759 MLPHQ9BV36 600 aaPredicted RBP16.18■□□□□ 0.18
COL18A1-203ENST00000359759 ZCCHC2Q9C0B9 1178 aaKnown RBP16.18■□□□□ 0.18
COL18A1-203ENST00000359759 ABCB9Q9NP78 766 aa16.18■□□□□ 0.18
COL18A1-203ENST00000359759 RPS6KA6Q9UK32 745 aa16.18■□□□□ 0.18
COL18A1-203ENST00000359759 MSX2P35548 267 aaPredicted RBP16.18■□□□□ 0.18
COL18A1-203ENST00000359759 RPS6KA3P51812 740 aa16.18■□□□□ 0.18
COL18A1-203ENST00000359759 UGT2B15P54855 530 aa16.18■□□□□ 0.18
COL18A1-203ENST00000359759 PRR23CQ6ZRP0 262 aa16.18■□□□□ 0.18
COL18A1-203ENST00000359759 TRAPPC12Q8WVT3 735 aa16.18■□□□□ 0.18
COL18A1-203ENST00000359759 SNX6Q9UNH7 406 aa16.18■□□□□ 0.18
COL18A1-203ENST00000359759 SSR3Q9UNL2 185 aa16.18■□□□□ 0.18
COL18A1-203ENST00000359759 QRICH2Q9H0J4 1663 aa16.18■□□□□ 0.18
COL18A1-203ENST00000359759 TRDMT1O14717 391 aaKnown RBP16.18■□□□□ 0.18
COL18A1-203ENST00000359759 CYP4F8P98187 520 aa16.18■□□□□ 0.18
COL18A1-203ENST00000359759 CDK5RAP1Q96SZ6 601 aaKnown RBP16.18■□□□□ 0.18
COL18A1-203ENST00000359759 HPSEQ9Y251 543 aa16.18■□□□□ 0.18
COL18A1-203ENST00000359759 R3HDM2Q9Y2K5 976 aaKnown RBP16.18■□□□□ 0.18
COL18A1-203ENST00000359759 ABL2P42684 1182 aa16.17■□□□□ 0.18
COL18A1-203ENST00000359759 PAGE2BQ5JRK9 111 aa16.17■□□□□ 0.18
COL18A1-203ENST00000359759 ULK2Q8IYT8 1036 aa16.17■□□□□ 0.18
COL18A1-203ENST00000359759 KBTBD8Q8NFY9 601 aa16.17■□□□□ 0.18
COL18A1-203ENST00000359759 CKAP2Q8WWK9 683 aa16.17■□□□□ 0.18
COL18A1-203ENST00000359759 EMID1Q96A84 441 aaPredicted RBP16.17■□□□□ 0.18
COL18A1-203ENST00000359759 Q96MT0 163 aa16.17■□□□□ 0.18
COL18A1-203ENST00000359759 IGFLR1Q9H665 355 aa16.17■□□□□ 0.18
COL18A1-203ENST00000359759 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.17■□□□□ 0.181e-6■□□□□ 11
COL18A1-203ENST00000359759 ABHD14A-ACY1A0A1B0GW23 586 aa16.17■□□□□ 0.18
COL18A1-203ENST00000359759 LOC110117498-PIK3R3F6TDL0 507 aa16.17■□□□□ 0.18
COL18A1-203ENST00000359759 CCNYL3P0C7X3 344 aa16.17■□□□□ 0.18
COL18A1-203ENST00000359759 PFKPQ01813 784 aa16.17■□□□□ 0.18
COL18A1-203ENST00000359759 TROAPQ12815 778 aa16.17■□□□□ 0.18
COL18A1-203ENST00000359759 PTCHD4Q6ZW05 846 aa16.17■□□□□ 0.18
COL18A1-203ENST00000359759 CXXC5Q7LFL8 322 aaKnown RBP16.17■□□□□ 0.18
COL18A1-203ENST00000359759 ZNF34Q8IZ26 560 aa16.17■□□□□ 0.18
COL18A1-203ENST00000359759 ASB2Q96Q27 587 aa16.17■□□□□ 0.18
COL18A1-203ENST00000359759 MROH8Q9H579 483 aa16.17■□□□□ 0.18
COL18A1-203ENST00000359759 HACD1B0YJ81 288 aa16.17■□□□□ 0.18
COL18A1-203ENST00000359759 WWP2O00308 870 aa16.17■□□□□ 0.18
COL18A1-203ENST00000359759 SLC6A3Q01959 620 aa16.17■□□□□ 0.18
COL18A1-203ENST00000359759 ZNF268Q14587 947 aaPredicted RBP16.17■□□□□ 0.18
COL18A1-203ENST00000359759 LDLRAP1Q5SW96 308 aa16.17■□□□□ 0.18
COL18A1-203ENST00000359759 APTXQ7Z2E3 356 aaKnown RBP16.17■□□□□ 0.18
COL18A1-203ENST00000359759 FAM98AQ8NCA5 519 aaKnown RBP16.17■□□□□ 0.18
COL18A1-203ENST00000359759 OR4A15Q8NGL6 344 aa16.17■□□□□ 0.18
COL18A1-203ENST00000359759 TRNT1Q96Q11 434 aaKnown RBP16.17■□□□□ 0.18
COL18A1-203ENST00000359759 FAM129BQ96TA1 746 aa16.17■□□□□ 0.18
COL18A1-203ENST00000359759 FBXO44Q9H4M3 255 aa16.17■□□□□ 0.18
COL18A1-203ENST00000359759 CCDC189A1A4V9 331 aa16.17■□□□□ 0.18
COL18A1-203ENST00000359759 DDX3XO00571 662 aaKnown RBP eCLIP16.17■□□□□ 0.187e-30■□□□□ 10
COL18A1-203ENST00000359759 RLN1P04808 185 aa16.17■□□□□ 0.18
COL18A1-203ENST00000359759 VIL1P09327 827 aaKnown RBP16.17■□□□□ 0.18
COL18A1-203ENST00000359759 PLEKHH3Q7Z736 793 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms