RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 PALM2Q8IXS6 379 aa14.07□□□□□ -0.16
PDLIM5-203ENST00000359265 CELF5Q8N6W0 485 aaKnown RBP14.07□□□□□ -0.16
PDLIM5-203ENST00000359265 ZNF557Q8N988 423 aaPredicted RBP14.07□□□□□ -0.16
PDLIM5-203ENST00000359265 FBXO36Q8NEA4 188 aa14.07□□□□□ -0.16
PDLIM5-203ENST00000359265 OR2W6PQ8NHA6 318 aa14.07□□□□□ -0.16
PDLIM5-203ENST00000359265 UHMK1Q8TAS1 419 aaKnown RBP14.07□□□□□ -0.16
PDLIM5-203ENST00000359265 ZSWIM3Q96MP5 696 aa14.07□□□□□ -0.16
PDLIM5-203ENST00000359265 CCDC77Q9BR77 488 aa14.07□□□□□ -0.16
PDLIM5-203ENST00000359265 TMEM109Q9BVC6 243 aa14.07□□□□□ -0.16
PDLIM5-203ENST00000359265 SLC25A51Q9H1U9 297 aa14.07□□□□□ -0.16
PDLIM5-203ENST00000359265 S1PR5Q9H228 398 aa14.07□□□□□ -0.16
PDLIM5-203ENST00000359265 TEX264Q9Y6I9 313 aa14.07□□□□□ -0.16
PDLIM5-203ENST00000359265 H3BQF6 201 aa14.06□□□□□ -0.16
PDLIM5-203ENST00000359265 SYF2O95926 243 aaKnown RBP14.06□□□□□ -0.16
PDLIM5-203ENST00000359265 SHBGP04278 402 aa14.06□□□□□ -0.16
PDLIM5-203ENST00000359265 GSTA2P09210 222 aa14.06□□□□□ -0.16
PDLIM5-203ENST00000359265 MYZAPP0CAP1 466 aa14.06□□□□□ -0.16
PDLIM5-203ENST00000359265 CSKP41240 450 aa14.06□□□□□ -0.16
PDLIM5-203ENST00000359265 ITKQ08881 620 aa14.06□□□□□ -0.16
PDLIM5-203ENST00000359265 MPP3Q13368 585 aa14.06□□□□□ -0.16
PDLIM5-203ENST00000359265 STAT4Q14765 748 aa14.06□□□□□ -0.16
PDLIM5-203ENST00000359265 UBAP2Q5T6F2 1119 aaKnown RBP14.06□□□□□ -0.16
PDLIM5-203ENST00000359265 RNF43Q68DV7 783 aa14.06□□□□□ -0.16
PDLIM5-203ENST00000359265 TPGS1Q6ZTW0 290 aa14.06□□□□□ -0.16
PDLIM5-203ENST00000359265 DCAF4L2Q8NA75 395 aa14.06□□□□□ -0.16
PDLIM5-203ENST00000359265 FGF13Q92913 245 aa14.06□□□□□ -0.16
PDLIM5-203ENST00000359265 SMARCD2Q92925 531 aa14.06□□□□□ -0.16
PDLIM5-203ENST00000359265 E2F7Q96AV8 911 aa14.06□□□□□ -0.16
PDLIM5-203ENST00000359265 OXNAD1Q96HP4 312 aaPredicted RBP14.06□□□□□ -0.16
PDLIM5-203ENST00000359265 ZNF419Q96HQ0 510 aaPredicted RBP14.06□□□□□ -0.16
PDLIM5-203ENST00000359265 MSLNLQ96KJ4 702 aa14.06□□□□□ -0.16
PDLIM5-203ENST00000359265 CINPQ9BW66 212 aaPredicted RBP14.06□□□□□ -0.16
PDLIM5-203ENST00000359265 ROPN1BQ9BZX4 212 aaPredicted RBP14.06□□□□□ -0.16
PDLIM5-203ENST00000359265 POLR1EQ9GZS1 481 aaKnown RBP14.06□□□□□ -0.16
PDLIM5-203ENST00000359265 ROPN1Q9HAT0 212 aaPredicted RBP14.06□□□□□ -0.16
PDLIM5-203ENST00000359265 LRRC4CQ9HCJ2 640 aa14.06□□□□□ -0.16
PDLIM5-203ENST00000359265 OBP2AQ9NY56 170 aa14.06□□□□□ -0.16
PDLIM5-203ENST00000359265 KIAA1522Q9P206 1035 aaPredicted RBP14.06□□□□□ -0.16
PDLIM5-203ENST00000359265 SEPT3Q9UH03 358 aa14.06□□□□□ -0.16
PDLIM5-203ENST00000359265 CD207Q9UJ71 328 aa14.06□□□□□ -0.16
PDLIM5-203ENST00000359265 VPS28Q9UK41 221 aa14.06□□□□□ -0.16
PDLIM5-203ENST00000359265 CDH7Q9ULB5 785 aa14.06□□□□□ -0.16
PDLIM5-203ENST00000359265 TPRP12270 2363 aaKnown RBP14.06□□□□□ -0.16
PDLIM5-203ENST00000359265 DOCK8Q8NF50 2099 aa14.06□□□□□ -0.16
PDLIM5-203ENST00000359265 GVINP1Q7Z2Y8 2422 aa14.05□□□□□ -0.16
PDLIM5-203ENST00000359265 CBX4O00257 560 aa14.05□□□□□ -0.16
PDLIM5-203ENST00000359265 AVILO75366 819 aa14.05□□□□□ -0.16
PDLIM5-203ENST00000359265 PDGFBP01127 241 aaPredicted RBP14.05□□□□□ -0.16
PDLIM5-203ENST00000359265 GRIA1P42261 906 aa14.05□□□□□ -0.16
PDLIM5-203ENST00000359265 GEMIN4P57678 1058 aaKnown RBP14.05□□□□□ -0.16
PDLIM5-203ENST00000359265 MTM1Q13496 603 aa14.05□□□□□ -0.16
PDLIM5-203ENST00000359265 SLC12A1Q13621 1099 aa14.05□□□□□ -0.16
PDLIM5-203ENST00000359265 SPARCL1Q14515 664 aa14.05□□□□□ -0.16
PDLIM5-203ENST00000359265 CBX2Q14781 532 aaPredicted RBP14.05□□□□□ -0.16
PDLIM5-203ENST00000359265 CAPN12Q6ZSI9 719 aa14.05□□□□□ -0.16
PDLIM5-203ENST00000359265 CCNJLQ8IV13 435 aa14.05□□□□□ -0.16
PDLIM5-203ENST00000359265 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.05□□□□□ -0.16
PDLIM5-203ENST00000359265 SMRP1Q8NCR6 262 aa14.05□□□□□ -0.16
PDLIM5-203ENST00000359265 IPMKQ8NFU5 416 aa14.05□□□□□ -0.16
PDLIM5-203ENST00000359265 FIBINQ8TAL6 211 aa14.05□□□□□ -0.16
PDLIM5-203ENST00000359265 RIN3Q8TB24 985 aa14.05□□□□□ -0.16
PDLIM5-203ENST00000359265 BHMTQ93088 406 aa14.05□□□□□ -0.16
PDLIM5-203ENST00000359265 ZBTB9Q96C00 473 aa14.05□□□□□ -0.16
PDLIM5-203ENST00000359265 STAMBPL1Q96FJ0 436 aa14.05□□□□□ -0.16
PDLIM5-203ENST00000359265 IMP4Q96G21 291 aaKnown RBP14.05□□□□□ -0.16
PDLIM5-203ENST00000359265 CFAP36Q96G28 342 aa14.05□□□□□ -0.16
PDLIM5-203ENST00000359265 ASB16Q96NS5 453 aa14.05□□□□□ -0.16
PDLIM5-203ENST00000359265 TBL1YQ9BQ87 522 aa14.05□□□□□ -0.16
PDLIM5-203ENST00000359265 WDR83Q9BRX9 315 aaKnown RBP14.05□□□□□ -0.16
PDLIM5-203ENST00000359265 NAT9Q9BTE0 207 aa14.05□□□□□ -0.16
PDLIM5-203ENST00000359265 FSD1LQ9BXM9 530 aa14.05□□□□□ -0.16
PDLIM5-203ENST00000359265 PPCSQ9HAB8 311 aa14.05□□□□□ -0.16
PDLIM5-203ENST00000359265 TMBIM4Q9HC24 238 aa14.05□□□□□ -0.16
PDLIM5-203ENST00000359265 CASS4Q9NQ75 786 aa14.05□□□□□ -0.16
PDLIM5-203ENST00000359265 VPS45Q9NRW7 570 aa14.05□□□□□ -0.16
PDLIM5-203ENST00000359265 ZC3H7BQ9UGR2 993 aaKnown RBP14.05□□□□□ -0.16
PDLIM5-203ENST00000359265 DMXL1Q9Y485 3027 aa14.05□□□□□ -0.16
PDLIM5-203ENST00000359265 CFAP47Q6ZTR5 3102 aa14.04□□□□□ -0.16
PDLIM5-203ENST00000359265 NCOR2Q9Y618 2525 aa14.04□□□□□ -0.16
PDLIM5-203ENST00000359265 KIAA1549LQ6ZVL6 1849 aa14.04□□□□□ -0.16
PDLIM5-203ENST00000359265 EXOC1LA0A1B0GW35 172 aa14.04□□□□□ -0.16
PDLIM5-203ENST00000359265 SDR42E2A6NKP2 422 aa14.04□□□□□ -0.16
PDLIM5-203ENST00000359265 RASGRF2O14827 1237 aa14.04□□□□□ -0.16
PDLIM5-203ENST00000359265 RNF40O75150 1001 aa14.04□□□□□ -0.16
PDLIM5-203ENST00000359265 PENKP01210 267 aaPredicted RBP14.04□□□□□ -0.16
PDLIM5-203ENST00000359265 MGAT1P26572 445 aa14.04□□□□□ -0.16
PDLIM5-203ENST00000359265 MZF1P28698 734 aaPredicted RBP14.04□□□□□ -0.16
PDLIM5-203ENST00000359265 SSTR1P30872 391 aa14.04□□□□□ -0.16
PDLIM5-203ENST00000359265 STX2P32856 288 aa14.04□□□□□ -0.16
PDLIM5-203ENST00000359265 SESN2P58004 480 aaPredicted RBP14.04□□□□□ -0.16
PDLIM5-203ENST00000359265 CDH17Q12864 832 aa14.04□□□□□ -0.16
PDLIM5-203ENST00000359265 FSCBQ5H9T9 825 aa14.04□□□□□ -0.16
PDLIM5-203ENST00000359265 FYB2Q5VWT5 728 aa14.04□□□□□ -0.16
PDLIM5-203ENST00000359265 ALG1LQ6GMV1 187 aa14.04□□□□□ -0.16
PDLIM5-203ENST00000359265 LEKR1Q6ZMV7 388 aa14.04□□□□□ -0.16
PDLIM5-203ENST00000359265 DNAAF3Q8N9W5 541 aa14.04□□□□□ -0.16
PDLIM5-203ENST00000359265 OR52K1Q8NGK4 314 aa14.04□□□□□ -0.16
PDLIM5-203ENST00000359265 SPATA22Q8NHS9 363 aa14.04□□□□□ -0.16
PDLIM5-203ENST00000359265 WFDC5Q8TCV5 224 aa14.04□□□□□ -0.16
PDLIM5-203ENST00000359265 IRF7Q92985 503 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms