RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 MARVELD2Q8N4S9 558 aa12.88□□□□□ -0.35
RTFDC1-202ENST00000357348 ZNF461Q8TAF7 563 aa12.88□□□□□ -0.35
RTFDC1-202ENST00000357348 SPPL2BQ8TCT7 592 aa12.88□□□□□ -0.35
RTFDC1-202ENST00000357348 GDPD5Q8WTR4 605 aa12.88□□□□□ -0.35
RTFDC1-202ENST00000357348 FAM210AQ96ND0 272 aa12.88□□□□□ -0.35
RTFDC1-202ENST00000357348 EBNA1BP2Q99848 306 aaKnown RBP12.88□□□□□ -0.35
RTFDC1-202ENST00000357348 ZBP1Q9H171 429 aa12.88□□□□□ -0.35
RTFDC1-202ENST00000357348 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.88□□□□□ -0.35
RTFDC1-202ENST00000357348 ETNK2Q9NVF9 386 aa12.88□□□□□ -0.35
RTFDC1-202ENST00000357348 MOCS1Q9NZB8 636 aa12.88□□□□□ -0.35
RTFDC1-202ENST00000357348 CDH22Q9UJ99 828 aa12.88□□□□□ -0.35
RTFDC1-202ENST00000357348 EMCNQ9ULC0 261 aa12.88□□□□□ -0.35
RTFDC1-202ENST00000357348 YBX2Q9Y2T7 364 aaKnown RBP12.88□□□□□ -0.35
RTFDC1-202ENST00000357348 BACE2Q9Y5Z0 518 aa12.88□□□□□ -0.35
RTFDC1-202ENST00000357348 MAD1L1Q9Y6D9 718 aa12.88□□□□□ -0.35
RTFDC1-202ENST00000357348 HIDE1A8MVS5 230 aa12.88□□□□□ -0.35
RTFDC1-202ENST00000357348 ZNF195O14628 629 aa12.88□□□□□ -0.35
RTFDC1-202ENST00000357348 SIN3BO75182 1162 aa12.88□□□□□ -0.35
RTFDC1-202ENST00000357348 FYNP06241 537 aa12.88□□□□□ -0.35
RTFDC1-202ENST00000357348 CNPP09543 421 aaKnown RBP12.88□□□□□ -0.35
RTFDC1-202ENST00000357348 ATF6P18850 670 aa12.88□□□□□ -0.35
RTFDC1-202ENST00000357348 TGM2P21980 687 aa12.88□□□□□ -0.35
RTFDC1-202ENST00000357348 DLG1Q12959 904 aa12.88□□□□□ -0.35
RTFDC1-202ENST00000357348 NME3Q13232 169 aa12.88□□□□□ -0.35
RTFDC1-202ENST00000357348 PDK3Q15120 406 aa12.88□□□□□ -0.35
RTFDC1-202ENST00000357348 FASTKD1Q53R41 847 aaKnown RBP12.88□□□□□ -0.35
RTFDC1-202ENST00000357348 RALGPS1Q5JS13 557 aa12.88□□□□□ -0.35
RTFDC1-202ENST00000357348 CFAP157Q5JU67 520 aa12.88□□□□□ -0.35
RTFDC1-202ENST00000357348 LPCAT4Q643R3 524 aa12.88□□□□□ -0.35
RTFDC1-202ENST00000357348 MAVSQ7Z434 540 aa12.88□□□□□ -0.35
RTFDC1-202ENST00000357348 KBTBD6Q86V97 674 aa12.88□□□□□ -0.35
RTFDC1-202ENST00000357348 ITFG2Q969R8 447 aa12.88□□□□□ -0.35
RTFDC1-202ENST00000357348 CNPY3Q9BT09 278 aa12.88□□□□□ -0.35
RTFDC1-202ENST00000357348 KLC2Q9H0B6 622 aa12.88□□□□□ -0.35
RTFDC1-202ENST00000357348 OCEL1Q9H607 264 aa12.88□□□□□ -0.35
RTFDC1-202ENST00000357348 CNGB3Q9NQW8 809 aa12.88□□□□□ -0.35
RTFDC1-202ENST00000357348 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.88□□□□□ -0.35
RTFDC1-202ENST00000357348 POMPQ9Y244 141 aa12.88□□□□□ -0.35
RTFDC1-202ENST00000357348 DNAJC16Q9Y2G8 782 aa12.88□□□□□ -0.35
RTFDC1-202ENST00000357348 PCDHA11Q9Y5I1 949 aa12.88□□□□□ -0.35
RTFDC1-202ENST00000357348 DOCK6Q96HP0 2047 aa12.87□□□□□ -0.35
RTFDC1-202ENST00000357348 ARHGAP42A6NI28 874 aa12.87□□□□□ -0.35
RTFDC1-202ENST00000357348 H7C0C1 242 aa12.87□□□□□ -0.35
RTFDC1-202ENST00000357348 ITM2AO43736 263 aa12.87□□□□□ -0.35
RTFDC1-202ENST00000357348 LTFP02788 710 aa12.87□□□□□ -0.35
RTFDC1-202ENST00000357348 HAPLN1P10915 354 aaPredicted RBP12.87□□□□□ -0.35
RTFDC1-202ENST00000357348 TPSB2P20231 275 aa12.87□□□□□ -0.35
RTFDC1-202ENST00000357348 IL4RP24394 825 aa12.87□□□□□ -0.35
RTFDC1-202ENST00000357348 PEX2P28328 305 aa12.87□□□□□ -0.35
RTFDC1-202ENST00000357348 IRS1P35568 1242 aa12.87□□□□□ -0.35
RTFDC1-202ENST00000357348 ATP5OP48047 213 aa12.87□□□□□ -0.35
RTFDC1-202ENST00000357348 SULT1E1P49888 294 aa12.87□□□□□ -0.35
RTFDC1-202ENST00000357348 CDH6P55285 790 aa12.87□□□□□ -0.35
RTFDC1-202ENST00000357348 TPSAB1Q15661 275 aa12.87□□□□□ -0.35
RTFDC1-202ENST00000357348 STEAP4Q687X5 459 aa12.87□□□□□ -0.35
RTFDC1-202ENST00000357348 DENND5BQ6ZUT9 1274 aa12.87□□□□□ -0.35
RTFDC1-202ENST00000357348 BHLHA9Q7RTU4 235 aa12.87□□□□□ -0.35
RTFDC1-202ENST00000357348 ALDH16A1Q8IZ83 802 aa12.87□□□□□ -0.35
RTFDC1-202ENST00000357348 NUP93Q8N1F7 819 aa12.87□□□□□ -0.35
RTFDC1-202ENST00000357348 PLD5Q8N7P1 536 aa12.87□□□□□ -0.35
RTFDC1-202ENST00000357348 DGCR14Q96DF8 476 aaKnown RBP12.87□□□□□ -0.35
RTFDC1-202ENST00000357348 PRICKLE1Q96MT3 831 aaPredicted RBP12.87□□□□□ -0.35
RTFDC1-202ENST00000357348 TBCBQ99426 244 aa12.87□□□□□ -0.35
RTFDC1-202ENST00000357348 MAGEB5Q9BZ81 275 aa12.87□□□□□ -0.35
RTFDC1-202ENST00000357348 PTTG2Q9NZH5 202 aa12.87□□□□□ -0.35
RTFDC1-202ENST00000357348 APOBEC2Q9Y235 224 aaKnown RBP12.87□□□□□ -0.35
RTFDC1-202ENST00000357348 PRRG1O14668 218 aa12.86□□□□□ -0.35
RTFDC1-202ENST00000357348 GRM6O15303 877 aa12.86□□□□□ -0.35
RTFDC1-202ENST00000357348 PRPSAP2O60256 369 aa12.86□□□□□ -0.35
RTFDC1-202ENST00000357348 ALDH1A2O94788 518 aa12.86□□□□□ -0.35
RTFDC1-202ENST00000357348 CTSAP10619 480 aa12.86□□□□□ -0.35
RTFDC1-202ENST00000357348 ITGAXP20702 1163 aa12.86□□□□□ -0.35
RTFDC1-202ENST00000357348 SLC1A6P48664 564 aa12.86□□□□□ -0.35
RTFDC1-202ENST00000357348 IDH3AP50213 366 aa12.86□□□□□ -0.35
RTFDC1-202ENST00000357348 CREB5Q02930 508 aa12.86□□□□□ -0.35
RTFDC1-202ENST00000357348 BSPRYQ5W0U4 402 aa12.86□□□□□ -0.35
RTFDC1-202ENST00000357348 SLC9A4Q6AI14 798 aa12.86□□□□□ -0.35
RTFDC1-202ENST00000357348 TRMT10BQ6PF06 316 aaKnown RBP12.86□□□□□ -0.35
RTFDC1-202ENST00000357348 ZCCHC23Q6ZST2 131 aa12.86□□□□□ -0.35
RTFDC1-202ENST00000357348 LCA5Q86VQ0 697 aa12.86□□□□□ -0.35
RTFDC1-202ENST00000357348 SPATA24Q86W54 205 aa12.86□□□□□ -0.35
RTFDC1-202ENST00000357348 PQLC3Q8N755 202 aa12.86□□□□□ -0.35
RTFDC1-202ENST00000357348 SLC7A14Q8TBB6 771 aa12.86□□□□□ -0.35
RTFDC1-202ENST00000357348 PBX4Q9BYU1 374 aa12.86□□□□□ -0.35
RTFDC1-202ENST00000357348 NMUR1Q9HB89 426 aa12.86□□□□□ -0.35
RTFDC1-202ENST00000357348 TMPRSS4Q9NRS4 437 aa12.86□□□□□ -0.35
RTFDC1-202ENST00000357348 GPATCH2LQ9NWQ4 482 aa12.86□□□□□ -0.35
RTFDC1-202ENST00000357348 PLK2Q9NYY3 685 aa12.86□□□□□ -0.35
RTFDC1-202ENST00000357348 PLXNA3P51805 1871 aa12.86□□□□□ -0.35
RTFDC1-202ENST00000357348 A0A1W2PQH9 124 aa12.86□□□□□ -0.35
RTFDC1-202ENST00000357348 M0QYT0 321 aa12.86□□□□□ -0.35
RTFDC1-202ENST00000357348 KCNN4O15554 427 aa12.86□□□□□ -0.35
RTFDC1-202ENST00000357348 PLIN3O60664 434 aa12.86□□□□□ -0.35
RTFDC1-202ENST00000357348 OPHN1O60890 802 aa12.86□□□□□ -0.35
RTFDC1-202ENST00000357348 GLRA3O75311 464 aa12.86□□□□□ -0.35
RTFDC1-202ENST00000357348 FBXO21O94952 628 aa12.86□□□□□ -0.35
RTFDC1-202ENST00000357348 ASLP04424 464 aa12.86□□□□□ -0.35
RTFDC1-202ENST00000357348 SERPINE1P05121 402 aa12.86□□□□□ -0.35
RTFDC1-202ENST00000357348 RBL1P28749 1068 aa12.86□□□□□ -0.35
RTFDC1-202ENST00000357348 MATKP42679 507 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms