RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 KIAA1324Q6UXG2 1013 aaKnown RBP12.47□□□□□ -0.41
COLCA1-201ENST00000355430 GET4Q7L5D6 327 aaPredicted RBP12.47□□□□□ -0.41
COLCA1-201ENST00000355430 KCTD4Q8WVF5 259 aa12.47□□□□□ -0.41
COLCA1-201ENST00000355430 B3GNT5Q9BYG0 378 aa12.47□□□□□ -0.41
COLCA1-201ENST00000355430 XPNPEP1Q9NQW7 623 aa12.47□□□□□ -0.41
COLCA1-201ENST00000355430 ACSS2Q9NR19 701 aa12.47□□□□□ -0.41
COLCA1-201ENST00000355430 LNPEPQ9UIQ6 1025 aa12.47□□□□□ -0.41
COLCA1-201ENST00000355430 ZNF839A8K0R7 811 aa12.46□□□□□ -0.41
COLCA1-201ENST00000355430 ENDOD1O94919 500 aa12.46□□□□□ -0.41
COLCA1-201ENST00000355430 LYNP07948 512 aa12.46□□□□□ -0.41
COLCA1-201ENST00000355430 USP17L7P0C7H9 530 aa12.46□□□□□ -0.41
COLCA1-201ENST00000355430 CYP2A6P11509 494 aaPredicted RBP12.46□□□□□ -0.41
COLCA1-201ENST00000355430 ITGALP20701 1170 aa12.46□□□□□ -0.41
COLCA1-201ENST00000355430 FASP25445 335 aa12.46□□□□□ -0.41
COLCA1-201ENST00000355430 PHKG1Q16816 387 aa12.46□□□□□ -0.41
COLCA1-201ENST00000355430 CWF19L1Q69YN2 538 aaKnown RBP12.46□□□□□ -0.41
COLCA1-201ENST00000355430 PLD3Q8IV08 490 aa12.46□□□□□ -0.41
COLCA1-201ENST00000355430 TMCO5AQ8N6Q1 288 aa12.46□□□□□ -0.41
COLCA1-201ENST00000355430 LMO3Q8TAP4 145 aa12.46□□□□□ -0.41
COLCA1-201ENST00000355430 RIN3Q8TB24 985 aa12.46□□□□□ -0.41
COLCA1-201ENST00000355430 PRDM12Q9H4Q4 367 aa12.46□□□□□ -0.41
COLCA1-201ENST00000355430 COG4Q9H9E3 785 aa12.46□□□□□ -0.41
COLCA1-201ENST00000355430 SCHIP1Q9P0W5 487 aaPredicted RBP12.46□□□□□ -0.41
COLCA1-201ENST00000355430 ZNF510Q9Y2H8 683 aa12.46□□□□□ -0.41
COLCA1-201ENST00000355430 MYH3P11055 1940 aa12.46□□□□□ -0.41
COLCA1-201ENST00000355430 ABHD14A-ACY1A0A1B0GW23 586 aa12.46□□□□□ -0.41
COLCA1-201ENST00000355430 SOWAHBA6NEL2 793 aa12.46□□□□□ -0.41
COLCA1-201ENST00000355430 DEAF1O75398 565 aaPredicted RBP12.46□□□□□ -0.41
COLCA1-201ENST00000355430 JAG1P78504 1218 aa12.46□□□□□ -0.41
COLCA1-201ENST00000355430 POU5F1Q01860 360 aaKnown RBP12.46□□□□□ -0.41
COLCA1-201ENST00000355430 CNKSR3Q6P9H4 555 aa12.46□□□□□ -0.41
COLCA1-201ENST00000355430 AMIGO3Q86WK7 504 aa12.46□□□□□ -0.41
COLCA1-201ENST00000355430 PHACTR4Q8IZ21 702 aa12.46□□□□□ -0.41
COLCA1-201ENST00000355430 SPATA6LQ8N4H0 392 aa12.46□□□□□ -0.41
COLCA1-201ENST00000355430 SEPHS2Q99611 448 aa12.46□□□□□ -0.41
COLCA1-201ENST00000355430 MRPL45Q9BRJ2 306 aaKnown RBP12.46□□□□□ -0.41
COLCA1-201ENST00000355430 MRPS26Q9BYN8 205 aaKnown RBP12.46□□□□□ -0.41
COLCA1-201ENST00000355430 PTPRHQ9HD43 1115 aa12.46□□□□□ -0.41
COLCA1-201ENST00000355430 DERAQ9Y315 318 aa12.46□□□□□ -0.41
COLCA1-201ENST00000355430 INSL6Q9Y581 213 aa12.46□□□□□ -0.41
COLCA1-201ENST00000355430 NT5C1B-RDH14C9J2C7 533 aa12.46□□□□□ -0.42
COLCA1-201ENST00000355430 ARL2P36404 184 aa12.46□□□□□ -0.42
COLCA1-201ENST00000355430 PPM1JQ5JR12 505 aa12.46□□□□□ -0.42
COLCA1-201ENST00000355430 DLK2Q6UY11 383 aa12.46□□□□□ -0.42
COLCA1-201ENST00000355430 THUMPD3Q9BV44 507 aaKnown RBP12.46□□□□□ -0.42
COLCA1-201ENST00000355430 SLC4A5Q9BY07 1137 aa12.46□□□□□ -0.42
COLCA1-201ENST00000355430 SDCBP2Q9H190 292 aa12.46□□□□□ -0.42
COLCA1-201ENST00000355430 POPDC2Q9HBU9 364 aa12.46□□□□□ -0.42
COLCA1-201ENST00000355430 TAS2R1Q9NYW7 299 aa12.46□□□□□ -0.42
COLCA1-201ENST00000355430 SEPT3Q9UH03 358 aa12.46□□□□□ -0.42
COLCA1-201ENST00000355430 ITM2BQ9Y287 266 aa12.46□□□□□ -0.42
COLCA1-201ENST00000355430 M0R3G1 203 aa12.46□□□□□ -0.42
COLCA1-201ENST00000355430 TRIM16O95361 564 aa12.46□□□□□ -0.42
COLCA1-201ENST00000355430 NFKB1P19838 968 aa12.46□□□□□ -0.42
COLCA1-201ENST00000355430 OR1E1P30953 314 aa12.46□□□□□ -0.42
COLCA1-201ENST00000355430 OR1D2P34982 312 aa12.46□□□□□ -0.42
COLCA1-201ENST00000355430 NRLP54845 237 aa12.46□□□□□ -0.42
COLCA1-201ENST00000355430 GPM6BQ13491 265 aa12.46□□□□□ -0.42
COLCA1-201ENST00000355430 C16orf72Q14CZ0 275 aa12.46□□□□□ -0.42
COLCA1-201ENST00000355430 UBAP2Q5T6F2 1119 aaKnown RBP12.46□□□□□ -0.42
COLCA1-201ENST00000355430 CCDC81Q6ZN84 652 aa12.46□□□□□ -0.42
COLCA1-201ENST00000355430 MAB21L3Q8N8X9 362 aa12.46□□□□□ -0.42
COLCA1-201ENST00000355430 DCAKDQ8WVC6 231 aa12.46□□□□□ -0.42
COLCA1-201ENST00000355430 CDH22Q9UJ99 828 aa12.46□□□□□ -0.42
COLCA1-201ENST00000355430 NUP98P52948 1817 aa12.46□□□□□ -0.42
COLCA1-201ENST00000355430 UGT1A9O60656 530 aa12.45□□□□□ -0.42
COLCA1-201ENST00000355430 SIN3BO75182 1162 aa12.45□□□□□ -0.42
COLCA1-201ENST00000355430 GBE1Q04446 702 aa12.45□□□□□ -0.42
COLCA1-201ENST00000355430 GAD2Q05329 585 aa12.45□□□□□ -0.42
COLCA1-201ENST00000355430 MPP2Q14168 576 aa12.45□□□□□ -0.42
COLCA1-201ENST00000355430 TNIP2Q8NFZ5 429 aa12.45□□□□□ -0.42
COLCA1-201ENST00000355430 SPPL2BQ8TCT7 592 aa12.45□□□□□ -0.42
COLCA1-201ENST00000355430 ULBP1Q9BZM6 244 aa12.45□□□□□ -0.42
COLCA1-201ENST00000355430 ZCCHC2Q9C0B9 1178 aaKnown RBP12.45□□□□□ -0.42
COLCA1-201ENST00000355430 TKTL2Q9H0I9 626 aa12.45□□□□□ -0.42
COLCA1-201ENST00000355430 UGT1A7Q9HAW7 530 aa12.45□□□□□ -0.42
COLCA1-201ENST00000355430 UGT1A10Q9HAW8 530 aa12.45□□□□□ -0.42
COLCA1-201ENST00000355430 UGT1A8Q9HAW9 530 aa12.45□□□□□ -0.42
COLCA1-201ENST00000355430 TBC1D13Q9NVG8 400 aa12.45□□□□□ -0.42
COLCA1-201ENST00000355430 AP4B1Q9Y6B7 739 aa12.45□□□□□ -0.42
COLCA1-201ENST00000355430 ERI2A8K979 691 aaKnown RBP12.45□□□□□ -0.42
COLCA1-201ENST00000355430 C1QTNF3-AMACRE9PGA6 284 aa12.45□□□□□ -0.42
COLCA1-201ENST00000355430 CLASP2O75122 1294 aaKnown RBP12.45□□□□□ -0.42
COLCA1-201ENST00000355430 EOMESO95936 686 aa12.45□□□□□ -0.42
COLCA1-201ENST00000355430 LRPAP1P30533 357 aa12.45□□□□□ -0.42
COLCA1-201ENST00000355430 GPX6P59796 221 aa12.45□□□□□ -0.42
COLCA1-201ENST00000355430 PLCL1Q15111 1095 aa12.45□□□□□ -0.42
COLCA1-201ENST00000355430 TPGS1Q6ZTW0 290 aa12.45□□□□□ -0.42
COLCA1-201ENST00000355430 FNIP1Q8TF40 1166 aa12.45□□□□□ -0.42
COLCA1-201ENST00000355430 LENG1Q96BZ8 264 aaPredicted RBP12.45□□□□□ -0.42
COLCA1-201ENST00000355430 ACE2Q9BYF1 805 aaPredicted RBP12.45□□□□□ -0.42
COLCA1-201ENST00000355430 IL22Q9GZX6 179 aa12.45□□□□□ -0.42
COLCA1-201ENST00000355430 TRMT13Q9NUP7 481 aaKnown RBP12.45□□□□□ -0.42
COLCA1-201ENST00000355430 TRMT6Q9UJA5 497 aaKnown RBP12.45□□□□□ -0.42
COLCA1-201ENST00000355430 PCDHGB4Q9UN71 923 aa12.45□□□□□ -0.42
COLCA1-201ENST00000355430 RAP2CQ9Y3L5 183 aa12.45□□□□□ -0.42
COLCA1-201ENST00000355430 INPP4BO15327 924 aa12.45□□□□□ -0.42
COLCA1-201ENST00000355430 CYP2C18P33260 490 aa12.45□□□□□ -0.42
COLCA1-201ENST00000355430 RPL5P46777 297 aaKnown RBP12.45□□□□□ -0.42
COLCA1-201ENST00000355430 ADARP55265 1226 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms