RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 CTU1Q7Z7A3 348 aaKnown RBP9.51□□□□□ -0.89
SMG6-202ENST00000354901 CMC1Q7Z7K0 106 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 LZTR1Q8N653 840 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 HTR3CQ8WXA8 447 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 JADE3Q92613 823 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 TMA16Q96EY4 203 aaKnown RBP9.51□□□□□ -0.89
SMG6-202ENST00000354901 CDCA5Q96FF9 252 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 CCDC138Q96M89 665 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 ZNF670Q9BS34 389 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 ZNF408Q9H9D4 720 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 PLEKHA5Q9HAU0 1116 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 PARVBQ9HBI1 364 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 KIAA1522Q9P206 1035 aaPredicted RBP9.51□□□□□ -0.89
SMG6-202ENST00000354901 DNAJB4Q9UDY4 337 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 MYRFQ9Y2G1 1151 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 GLTPD2A6NH11 291 aa9.5□□□□□ -0.89
SMG6-202ENST00000354901 TOR1BO14657 336 aa9.5□□□□□ -0.89
SMG6-202ENST00000354901 TPST1O60507 370 aa9.5□□□□□ -0.89
SMG6-202ENST00000354901 TGDSO95455 350 aa9.5□□□□□ -0.89
SMG6-202ENST00000354901 CLIC3O95833 236 aa9.5□□□□□ -0.89
SMG6-202ENST00000354901 BPGMP07738 259 aa9.5□□□□□ -0.89
SMG6-202ENST00000354901 TSHRP16473 764 aa9.5□□□□□ -0.89
SMG6-202ENST00000354901 DDX5P17844 614 aaKnown RBP9.5□□□□□ -0.89
SMG6-202ENST00000354901 PSMB4P28070 264 aa9.5□□□□□ -0.89
SMG6-202ENST00000354901 SOX11P35716 441 aa9.5□□□□□ -0.89
SMG6-202ENST00000354901 SULT1E1P49888 294 aa9.5□□□□□ -0.89
SMG6-202ENST00000354901 BMXP51813 675 aa9.5□□□□□ -0.89
SMG6-202ENST00000354901 ZNF484Q5JVG2 852 aa9.5□□□□□ -0.89
SMG6-202ENST00000354901 SPDYAQ5MJ70 313 aa9.5□□□□□ -0.89
SMG6-202ENST00000354901 CCSAPQ6IQ19 270 aaPredicted RBP9.5□□□□□ -0.89
SMG6-202ENST00000354901 TAS2R42Q7RTR8 314 aa9.5□□□□□ -0.89
SMG6-202ENST00000354901 TNS4Q8IZW8 715 aa9.5□□□□□ -0.89
SMG6-202ENST00000354901 DEFB106AQ8N104 65 aa9.5□□□□□ -0.89
SMG6-202ENST00000354901 PHTF2Q8N3S3 785 aa9.5□□□□□ -0.89
SMG6-202ENST00000354901 PDCD6IPQ8WUM4 868 aaKnown RBP9.5□□□□□ -0.89
SMG6-202ENST00000354901 CDRT15Q96T59 188 aa9.5□□□□□ -0.89
SMG6-202ENST00000354901 SLC4A5Q9BY07 1137 aa9.5□□□□□ -0.89
SMG6-202ENST00000354901 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.5□□□□□ -0.89
SMG6-202ENST00000354901 PSMD13Q9UNM6 376 aa9.5□□□□□ -0.89
SMG6-202ENST00000354901 H3BNX3 289 aa9.5□□□□□ -0.89
SMG6-202ENST00000354901 TAF4O00268 1085 aa9.5□□□□□ -0.89
SMG6-202ENST00000354901 MYO1DO94832 1006 aa9.5□□□□□ -0.89
SMG6-202ENST00000354901 EEF1B2P24534 225 aaKnown RBP9.5□□□□□ -0.89
SMG6-202ENST00000354901 NDUFV1P49821 464 aa9.5□□□□□ -0.89
SMG6-202ENST00000354901 PID1Q7Z2X4 250 aa9.5□□□□□ -0.89
SMG6-202ENST00000354901 TFB1MQ8WVM0 346 aaKnown RBP9.5□□□□□ -0.89
SMG6-202ENST00000354901 CCDC106Q9BWC9 280 aa9.5□□□□□ -0.89
SMG6-202ENST00000354901 PNPOQ9NVS9 261 aa9.5□□□□□ -0.89
SMG6-202ENST00000354901 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.5□□□□□ -0.89
SMG6-202ENST00000354901 MTMR10Q9NXD2 777 aa9.5□□□□□ -0.89
SMG6-202ENST00000354901 GJD2Q9UKL4 321 aa9.5□□□□□ -0.89
SMG6-202ENST00000354901 SSX2IPQ9Y2D8 614 aa9.5□□□□□ -0.89
SMG6-202ENST00000354901 PPME1Q9Y570 386 aa9.5□□□□□ -0.89
SMG6-202ENST00000354901 SNX13Q9Y5W8 968 aa9.5□□□□□ -0.89
SMG6-202ENST00000354901 RNF103O00237 685 aa9.5□□□□□ -0.89
SMG6-202ENST00000354901 PLOD2O00469 737 aa9.5□□□□□ -0.89
SMG6-202ENST00000354901 TRDMT1O14717 391 aaKnown RBP9.5□□□□□ -0.89
SMG6-202ENST00000354901 RECQL4O94761 1208 aa9.5□□□□□ -0.89
SMG6-202ENST00000354901 XRCC1P18887 633 aaPredicted RBP9.5□□□□□ -0.89
SMG6-202ENST00000354901 ITGAXP20702 1163 aa9.5□□□□□ -0.89
SMG6-202ENST00000354901 TYK2P29597 1187 aa9.5□□□□□ -0.89
SMG6-202ENST00000354901 CPOXP36551 454 aa9.5□□□□□ -0.89
SMG6-202ENST00000354901 YAP1P46937 504 aaKnown RBP9.5□□□□□ -0.89
SMG6-202ENST00000354901 NSUN2Q08J23 767 aaKnown RBP eCLIP9.5□□□□□ -0.89
SMG6-202ENST00000354901 ADIGQ0VDE8 80 aa9.5□□□□□ -0.89
SMG6-202ENST00000354901 GRIK4Q16099 956 aa9.5□□□□□ -0.89
SMG6-202ENST00000354901 OGFRL1Q5TC84 451 aaPredicted RBP9.5□□□□□ -0.89
SMG6-202ENST00000354901 NCBP2-AS2Q69YL0 99 aa9.5□□□□□ -0.89
SMG6-202ENST00000354901 NIPAL1Q6NVV3 410 aa9.5□□□□□ -0.89
SMG6-202ENST00000354901 NEPROQ6NW34 567 aa9.5□□□□□ -0.89
SMG6-202ENST00000354901 KYAT3Q6YP21 454 aaKnown RBP9.5□□□□□ -0.89
SMG6-202ENST00000354901 CIB1Q99828 191 aa9.5□□□□□ -0.89
SMG6-202ENST00000354901 ZNF696Q9H7X3 374 aa9.5□□□□□ -0.89
SMG6-202ENST00000354901 VRTNQ9H8Y1 702 aa9.5□□□□□ -0.89
SMG6-202ENST00000354901 PNPLA8Q9NP80 782 aa9.5□□□□□ -0.89
SMG6-202ENST00000354901 SYBUQ9NX95 663 aa9.5□□□□□ -0.89
SMG6-202ENST00000354901 SIRPGQ9P1W8 387 aa9.5□□□□□ -0.89
SMG6-202ENST00000354901 PCDHA11Q9Y5I1 949 aa9.5□□□□□ -0.89
SMG6-202ENST00000354901 DNAJC25-GNG10A0A024R161 153 aa9.49□□□□□ -0.89
SMG6-202ENST00000354901 FAM159BA6NKW6 160 aa9.49□□□□□ -0.89
SMG6-202ENST00000354901 MDM4O15151 490 aa9.49□□□□□ -0.89
SMG6-202ENST00000354901 ALDOAP04075 364 aaKnown RBP9.49□□□□□ -0.89
SMG6-202ENST00000354901 CD1EP15812 388 aa9.49□□□□□ -0.89
SMG6-202ENST00000354901 ZNF23P17027 643 aa9.49□□□□□ -0.89
SMG6-202ENST00000354901 GNL1P36915 607 aaPredicted RBP9.49□□□□□ -0.89
SMG6-202ENST00000354901 CLK3P49761 638 aaKnown RBP9.49□□□□□ -0.89
SMG6-202ENST00000354901 PDPK2PQ6A1A2 396 aa9.49□□□□□ -0.89
SMG6-202ENST00000354901 NXNQ6DKJ4 435 aa9.49□□□□□ -0.89
SMG6-202ENST00000354901 TTC33Q6PID6 262 aaPredicted RBP9.49□□□□□ -0.89
SMG6-202ENST00000354901 CALML6Q8TD86 181 aa9.49□□□□□ -0.89
SMG6-202ENST00000354901 SLC39A3Q9BRY0 314 aa9.49□□□□□ -0.89
SMG6-202ENST00000354901 POLR1BQ9H9Y6 1135 aa9.49□□□□□ -0.89
SMG6-202ENST00000354901 XPNPEP3Q9NQH7 507 aa9.49□□□□□ -0.89
SMG6-202ENST00000354901 UBP1Q9NZI7 540 aa9.49□□□□□ -0.89
SMG6-202ENST00000354901 KIAA1257Q9ULG3 409 aa9.49□□□□□ -0.89
SMG6-202ENST00000354901 SLC45A1Q9Y2W3 748 aa9.49□□□□□ -0.89
SMG6-202ENST00000354901 SAC3D1A6NKF1 404 aa9.49□□□□□ -0.89
SMG6-202ENST00000354901 FBXO21O94952 628 aa9.49□□□□□ -0.89
SMG6-202ENST00000354901 ZNF12P17014 697 aa9.49□□□□□ -0.89
SMG6-202ENST00000354901 IGFBP6P24592 240 aaPredicted RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms