RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 SPTY2D1-AS1A0A0U1RR47 76 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 TCAF2A6NFQ2 919 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 NOBOXO60393 691 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 PAK4O96013 591 aaPredicted RBP11.43□□□□□ -0.58
RTN3-204ENST00000354497 CALCAP01258 141 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 FYNP06241 537 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 JMJD7P0C870 316 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 PNMA6AP0CW24 399 aaPredicted RBP11.43□□□□□ -0.58
RTN3-204ENST00000354497 LIPCP11150 499 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 RABIFP47224 123 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 OXCT1P55809 520 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 NNTQ13423 1086 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 SKIDA1Q1XH10 827 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 CXorf57Q6NSI4 855 aaKnown RBP11.43□□□□□ -0.58
RTN3-204ENST00000354497 ESRP1Q6NXG1 681 aaKnown RBP11.43□□□□□ -0.58
RTN3-204ENST00000354497 FBXO38Q6PIJ6 1188 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 ERN2Q76MJ5 926 aaKnown RBP11.43□□□□□ -0.58
RTN3-204ENST00000354497 B3GNT8Q7Z7M8 397 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 SLC35F3Q8IY50 421 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 SH2D3CQ8N5H7 860 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 ATP11CQ8NB49 1132 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 FAM174AQ8TBP5 190 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 SLC35F5Q8WV83 523 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 TFAP2BQ92481 460 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 CCDC47Q96A33 483 aaKnown RBP11.43□□□□□ -0.58
RTN3-204ENST00000354497 LIN37Q96GY3 246 aaPredicted RBP11.43□□□□□ -0.58
RTN3-204ENST00000354497 BTN2A3PQ96KV6 586 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 GFM1Q96RP9 751 aaKnown RBP11.43□□□□□ -0.58
RTN3-204ENST00000354497 SLC17A9Q9BYT1 436 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 FOXP3Q9BZS1 431 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 MUC3BQ9H195 1237 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 SLC25A18Q9H1K4 315 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 FAM204AQ9H8W3 233 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 SPASTQ9UBP0 616 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 APOBEC3BQ9UH17 382 aaKnown RBP11.43□□□□□ -0.58
RTN3-204ENST00000354497 DACH1Q9UI36 760 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 KLF15Q9UIH9 416 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 PCDHB4Q9Y5E5 795 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 PCDHGA7Q9Y5G6 932 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 HS3ST3A1Q9Y663 406 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 COL27A1Q8IZC6 1860 aaPredicted RBP11.43□□□□□ -0.58
RTN3-204ENST00000354497 TDRD6O60522 2096 aaKnown RBP11.43□□□□□ -0.58
RTN3-204ENST00000354497 FPGTO14772 594 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 RAD51BO15315 384 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 SLU7O95391 586 aaKnown RBP11.43□□□□□ -0.58
RTN3-204ENST00000354497 ANXA6P08133 673 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 EPB41P11171 864 aaKnown RBP11.43□□□□□ -0.58
RTN3-204ENST00000354497 SRCP12931 536 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 CR2P20023 1033 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 PLK1P53350 603 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 GYS2P54840 703 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 ENPEPQ07075 957 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 BIRC2Q13490 618 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 CLCA4Q14CN2 919 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 TCEA2Q15560 299 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 IGFBP7Q16270 282 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 PRRT3Q5FWE3 981 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 TTC39BQ5VTQ0 682 aaPredicted RBP11.43□□□□□ -0.58
RTN3-204ENST00000354497 SYPL2Q5VXT5 272 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 RESP18Q5W5W9 173 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 TMEM270Q6UE05 265 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 CHST14Q8NCH0 376 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 BTN2A2Q8WVV5 523 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 PPP1R16AQ96I34 528 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 SEMA3CQ99985 751 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 FEM1AQ9BSK4 669 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 EPN3Q9H201 632 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 TNKS2Q9H2K2 1166 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 TCEAL2Q9H3H9 227 aaPredicted RBP11.43□□□□□ -0.58
RTN3-204ENST00000354497 KCNF1Q9H3M0 494 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 L2HGDHQ9H9P8 463 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 SIRPGQ9P1W8 387 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 KIAA1257Q9ULG3 409 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 PADI4Q9UM07 663 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 PCDHA7Q9UN72 937 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 DOLKQ9UPQ8 538 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 PCDHB11Q9Y5F2 797 aa11.43□□□□□ -0.58
RTN3-204ENST00000354497 COL12A1Q99715 3063 aa11.42□□□□□ -0.58
RTN3-204ENST00000354497 KCNU1A8MYU2 1149 aa11.42□□□□□ -0.58
RTN3-204ENST00000354497 K7ERQ8 282 aa11.42□□□□□ -0.58
RTN3-204ENST00000354497 RNF103O00237 685 aa11.42□□□□□ -0.58
RTN3-204ENST00000354497 TPP1O14773 563 aa11.42□□□□□ -0.58
RTN3-204ENST00000354497 ACTN4O43707 911 aaKnown RBP11.42□□□□□ -0.58
RTN3-204ENST00000354497 ENDOD1O94919 500 aa11.42□□□□□ -0.58
RTN3-204ENST00000354497 TRUB2O95900 331 aaKnown RBP11.42□□□□□ -0.58
RTN3-204ENST00000354497 PRNPP04156 253 aa11.42□□□□□ -0.58
RTN3-204ENST00000354497 TNNT1P13805 278 aa11.42□□□□□ -0.58
RTN3-204ENST00000354497 RRM1P23921 792 aa11.42□□□□□ -0.58
RTN3-204ENST00000354497 NOS2P35228 1153 aa11.42□□□□□ -0.58
RTN3-204ENST00000354497 GGCXP38435 758 aa11.42□□□□□ -0.58
RTN3-204ENST00000354497 NEK3P51956 506 aa11.42□□□□□ -0.58
RTN3-204ENST00000354497 RWDD2BP57060 319 aa11.42□□□□□ -0.58
RTN3-204ENST00000354497 RPS21P63220 83 aaKnown RBP11.42□□□□□ -0.58
RTN3-204ENST00000354497 EIF2B5Q13144 721 aaKnown RBP11.42□□□□□ -0.58
RTN3-204ENST00000354497 SGCGQ13326 291 aa11.42□□□□□ -0.58
RTN3-204ENST00000354497 EIF3IQ13347 325 aaKnown RBP11.42□□□□□ -0.58
RTN3-204ENST00000354497 FGL2Q14314 439 aa11.42□□□□□ -0.58
RTN3-204ENST00000354497 CRYMQ14894 314 aa11.42□□□□□ -0.58
RTN3-204ENST00000354497 NFIL3Q16649 462 aa11.42□□□□□ -0.58
RTN3-204ENST00000354497 CBWD6Q4V339 395 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms