RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 MCRS1Q96EZ8 462 aa15.06■□□□□ 0
COL17A1-201ENST00000353479 SIX2Q9NPC8 291 aa15.06■□□□□ 0
COL17A1-201ENST00000353479 GPSM3Q9Y4H4 160 aa15.06■□□□□ 0
COL17A1-201ENST00000353479 NRP1O14786 923 aa15.05■□□□□ 0
COL17A1-201ENST00000353479 PIGRP01833 764 aa15.05■□□□□ 0
COL17A1-201ENST00000353479 CES1P23141 567 aa15.05■□□□□ 0
COL17A1-201ENST00000353479 ENPEPQ07075 957 aa15.05■□□□□ 0
COL17A1-201ENST00000353479 PARP15Q460N3 678 aa15.05■□□□□ 0
COL17A1-201ENST00000353479 ATAT1Q5SQI0 421 aa15.05■□□□□ 0
COL17A1-201ENST00000353479 MIR1-1HGQ9H1L0 117 aa15.05■□□□□ 0
COL17A1-201ENST00000353479 SLC40A1Q9NP59 571 aa15.05■□□□□ 0
COL17A1-201ENST00000353479 RCOR3Q9P2K3 495 aaPredicted RBP15.05■□□□□ 0
COL17A1-201ENST00000353479 DEC1Q9P2X7 70 aa15.05■□□□□ 0
COL17A1-201ENST00000353479 HMGXB4Q9UGU5 601 aa15.05■□□□□ 0
COL17A1-201ENST00000353479 SLC38A8A6NNN8 435 aa15.05■□□□□ -0
COL17A1-201ENST00000353479 PIGNO95427 931 aa15.05■□□□□ -0
COL17A1-201ENST00000353479 ALADP13716 330 aa15.05■□□□□ -0
COL17A1-201ENST00000353479 PEX5P50542 639 aa15.05■□□□□ -0
COL17A1-201ENST00000353479 FPGSQ05932 587 aa15.05■□□□□ -0
COL17A1-201ENST00000353479 FAM151BQ6UXP7 276 aa15.05■□□□□ -0
COL17A1-201ENST00000353479 SCUBE1Q8IWY4 988 aa15.05■□□□□ -0
COL17A1-201ENST00000353479 CCDC134Q9H6E4 229 aa15.05■□□□□ -0
COL17A1-201ENST00000353479 CD48P09326 243 aa15.05■□□□□ -0
COL17A1-201ENST00000353479 MYBL2P10244 700 aa15.05■□□□□ -0
COL17A1-201ENST00000353479 DAOAP59103 153 aa15.05■□□□□ -0
COL17A1-201ENST00000353479 SULT2A1Q06520 285 aa15.05■□□□□ -0
COL17A1-201ENST00000353479 MAD2L1Q13257 205 aaPredicted RBP15.05■□□□□ -0
COL17A1-201ENST00000353479 TEX44Q53QW1 395 aa15.05■□□□□ -0
COL17A1-201ENST00000353479 PLD5Q8N7P1 536 aa15.05■□□□□ -0
COL17A1-201ENST00000353479 MAGEC3Q8TD91 643 aa15.05■□□□□ -0
COL17A1-201ENST00000353479 MYO19Q96H55 970 aa15.05■□□□□ -0
COL17A1-201ENST00000353479 VPS51Q9UID3 782 aa15.05■□□□□ -0
COL17A1-201ENST00000353479 SNX10Q9Y5X0 201 aa15.05■□□□□ -0
COL17A1-201ENST00000353479 ACSL4O60488 711 aa15.05■□□□□ -0
COL17A1-201ENST00000353479 SYN1P17600 705 aa15.05■□□□□ -0
COL17A1-201ENST00000353479 CCND1P24385 295 aa15.05■□□□□ -0
COL17A1-201ENST00000353479 PTPN9P43378 593 aa15.05■□□□□ -0
COL17A1-201ENST00000353479 DRG2P55039 364 aaKnown RBP15.05■□□□□ -0
COL17A1-201ENST00000353479 CERCAMQ5T4B2 595 aa15.05■□□□□ -0
COL17A1-201ENST00000353479 IL27RAQ6UWB1 636 aa15.05■□□□□ -0
COL17A1-201ENST00000353479 RHOBTB2Q9BYZ6 727 aa15.05■□□□□ -0
COL17A1-201ENST00000353479 TTYH3Q9C0H2 523 aa15.05■□□□□ -0
COL17A1-201ENST00000353479 CACNA2D2Q9NY47 1150 aa15.05■□□□□ -0
COL17A1-201ENST00000353479 TRPC4Q9UBN4 977 aa15.05■□□□□ -0
COL17A1-201ENST00000353479 UBOX5O94941 541 aa15.04■□□□□ -0
COL17A1-201ENST00000353479 LCA5LO95447 670 aa15.04■□□□□ -0
COL17A1-201ENST00000353479 ANXA5P08758 320 aa15.04■□□□□ -0
COL17A1-201ENST00000353479 RHOQP17081 205 aa15.04■□□□□ -0
COL17A1-201ENST00000353479 LINGO4Q6UY18 593 aa15.04■□□□□ -0
COL17A1-201ENST00000353479 REPS1Q96D71 796 aa15.04■□□□□ -0
COL17A1-201ENST00000353479 CYLDQ9NQC7 956 aa15.04■□□□□ -0
COL17A1-201ENST00000353479 SUFUQ9UMX1 484 aa15.04■□□□□ -0
COL17A1-201ENST00000353479 ZFP37Q9Y6Q3 630 aaPredicted RBP15.04■□□□□ -0
COL17A1-201ENST00000353479 RGPD1P0DJD0 1748 aa15.04■□□□□ -0
COL17A1-201ENST00000353479 C8AP07357 584 aa15.04■□□□□ -0
COL17A1-201ENST00000353479 HLA-DPA1P20036 260 aa15.04■□□□□ -0
COL17A1-201ENST00000353479 AUHQ13825 339 aaKnown RBP15.04■□□□□ -0
COL17A1-201ENST00000353479 CYP2A13Q16696 494 aa15.04■□□□□ -0
COL17A1-201ENST00000353479 CIR1Q86X95 450 aaPredicted RBP15.04■□□□□ -0
COL17A1-201ENST00000353479 CPA6Q8N4T0 437 aa15.04■□□□□ -0
COL17A1-201ENST00000353479 NDOR1Q9UHB4 597 aa15.04■□□□□ -0
COL17A1-201ENST00000353479 CLUHO75153 1309 aa15.04■□□□□ -0
COL17A1-201ENST00000353479 TCRBV7S2A1N4TA0A589 114 aa15.04■□□□□ -0
COL17A1-201ENST00000353479 ZNF839A8K0R7 811 aa15.04■□□□□ -0
COL17A1-201ENST00000353479 ZNF682O95780 498 aa15.04■□□□□ -0
COL17A1-201ENST00000353479 F2P00734 622 aa15.04■□□□□ -0
COL17A1-201ENST00000353479 MC4RP32245 332 aa15.04■□□□□ -0
COL17A1-201ENST00000353479 CDKN2BP42772 138 aa15.04■□□□□ -0
COL17A1-201ENST00000353479 PIK3CGP48736 1102 aa15.04■□□□□ -0
COL17A1-201ENST00000353479 CLEC4CQ8WTT0 213 aa15.04■□□□□ -0
COL17A1-201ENST00000353479 ATXN2LQ8WWM7 1075 aaKnown RBP15.04■□□□□ -0
COL17A1-201ENST00000353479 AASDHPPTQ9NRN7 309 aa15.04■□□□□ -0
COL17A1-201ENST00000353479 H2AFY2Q9P0M6 372 aaPredicted RBP15.04■□□□□ -0
COL17A1-201ENST00000353479 MYH2Q9UKX2 1941 aa15.04■□□□□ -0
COL17A1-201ENST00000353479 AGRPO00253 132 aa15.04■□□□□ -0
COL17A1-201ENST00000353479 INPP4BO15327 924 aa15.04■□□□□ -0
COL17A1-201ENST00000353479 ELFN1P0C7U0 828 aa15.04■□□□□ -0
COL17A1-201ENST00000353479 PTPN2P17706 415 aa15.04■□□□□ -0
COL17A1-201ENST00000353479 OCA2Q04671 838 aa15.04■□□□□ -0
COL17A1-201ENST00000353479 KREMEN2Q8NCW0 462 aa15.04■□□□□ -0
COL17A1-201ENST00000353479 OR4L1Q8NH43 312 aa15.04■□□□□ -0
COL17A1-201ENST00000353479 B4GALNT2Q8NHY0 566 aa15.04■□□□□ -0
COL17A1-201ENST00000353479 SCAMP5Q8TAC9 235 aa15.04■□□□□ -0
COL17A1-201ENST00000353479 FAM120BQ96EK7 910 aaKnown RBP15.04■□□□□ -0
COL17A1-201ENST00000353479 CAAP1Q9H8G2 361 aa15.04■□□□□ -0
COL17A1-201ENST00000353479 COQ4Q9Y3A0 265 aa15.04■□□□□ -0
COL17A1-201ENST00000353479 CPQQ9Y646 472 aa15.04■□□□□ -0
COL17A1-201ENST00000353479 C5P01031 1676 aa15.04■□□□□ -0
COL17A1-201ENST00000353479 LRIG2O94898 1065 aa15.04■□□□□ -0
COL17A1-201ENST00000353479 NQO1P15559 274 aaKnown RBP15.04■□□□□ -0
COL17A1-201ENST00000353479 CHRNB3Q05901 458 aa15.04■□□□□ -0
COL17A1-201ENST00000353479 SPATA6LQ8N4H0 392 aa15.04■□□□□ -0
COL17A1-201ENST00000353479 PTGR2Q8N8N7 351 aaPredicted RBP15.04■□□□□ -0
COL17A1-201ENST00000353479 A0A1W2PQ45 241 aaPredicted RBP15.03■□□□□ -0
COL17A1-201ENST00000353479 A0A1W2PQY0 241 aa15.03■□□□□ -0
COL17A1-201ENST00000353479 YJEFN3A6XGL0 299 aa15.03■□□□□ -0
COL17A1-201ENST00000353479 E7ENQ6 273 aa15.03■□□□□ -0
COL17A1-201ENST00000353479 TNNI3P19429 210 aa15.03■□□□□ -0
COL17A1-201ENST00000353479 TFEBP19484 476 aa15.03■□□□□ -0
COL17A1-201ENST00000353479 WASP42768 502 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms