RNA–Protein interactions for RNA: ENST00000351205.8

SMN1-201, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 900 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-201ENST00000351205 HS3ST3A1Q9Y663 406 aa17.16■□□□□ 0.34
SMN1-201ENST00000351205 CXorf51AA0A1B0GTR3 108 aa17.15■□□□□ 0.34
SMN1-201ENST00000351205 LRIG2O94898 1065 aa17.15■□□□□ 0.34
SMN1-201ENST00000351205 UNGP13051 313 aaPredicted RBP17.15■□□□□ 0.34
SMN1-201ENST00000351205 ETFBP38117 255 aa17.15■□□□□ 0.34
SMN1-201ENST00000351205 EIF2S3P41091 472 aaKnown RBP17.15■□□□□ 0.34
SMN1-201ENST00000351205 HDAC4P56524 1084 aa17.15■□□□□ 0.34
SMN1-201ENST00000351205 E2F1Q01094 437 aa17.15■□□□□ 0.34
SMN1-201ENST00000351205 PTP4A2Q12974 167 aa17.15■□□□□ 0.34
SMN1-201ENST00000351205 TRIM72Q6ZMU5 477 aa17.15■□□□□ 0.34
SMN1-201ENST00000351205 PLPP6Q8IY26 295 aa17.15■□□□□ 0.34
SMN1-201ENST00000351205 CACTIN-AS1Q8N1I8 211 aa17.15■□□□□ 0.34
SMN1-201ENST00000351205 RYBPQ8N488 228 aaPredicted RBP17.15■□□□□ 0.34
SMN1-201ENST00000351205 DCBLD1Q8N8Z6 715 aa17.15■□□□□ 0.34
SMN1-201ENST00000351205 FAM174AQ8TBP5 190 aa17.15■□□□□ 0.34
SMN1-201ENST00000351205 FAM172AQ8WUF8 416 aa17.15■□□□□ 0.34
SMN1-201ENST00000351205 CENPIQ92674 756 aaPredicted RBP17.15■□□□□ 0.34
SMN1-201ENST00000351205 IFT43Q96FT9 208 aa17.15■□□□□ 0.34
SMN1-201ENST00000351205 PCDHB18PQ96TA0 734 aa17.15■□□□□ 0.34
SMN1-201ENST00000351205 TMEM248Q9NWD8 314 aa17.15■□□□□ 0.34
SMN1-201ENST00000351205 PTPRQQ9UMZ3 2332 aa17.15■□□□□ 0.34
SMN1-201ENST00000351205 C16orf96A6NNT2 1141 aa17.14■□□□□ 0.33
SMN1-201ENST00000351205 BRINP1O60477 761 aa17.14■□□□□ 0.33
SMN1-201ENST00000351205 NEBLO76041 1014 aa17.14■□□□□ 0.33
SMN1-201ENST00000351205 PLEKP08567 350 aaPredicted RBP17.14■□□□□ 0.33
SMN1-201ENST00000351205 ALPPL2P10696 532 aa17.14■□□□□ 0.33
SMN1-201ENST00000351205 CKMT1AP12532 417 aa17.14■□□□□ 0.33
SMN1-201ENST00000351205 MYF5P13349 255 aa17.14■□□□□ 0.33
SMN1-201ENST00000351205 ITPKBP27987 946 aa17.14■□□□□ 0.33
SMN1-201ENST00000351205 ABL2P42684 1182 aa17.14■□□□□ 0.33
SMN1-201ENST00000351205 GEMIN4P57678 1058 aaKnown RBP17.14■□□□□ 0.33
SMN1-201ENST00000351205 FZD2Q14332 565 aa17.14■□□□□ 0.33
SMN1-201ENST00000351205 FKBP15Q5T1M5 1219 aa17.14■□□□□ 0.33
SMN1-201ENST00000351205 LEKR1Q6ZMV7 388 aa17.14■□□□□ 0.33
SMN1-201ENST00000351205 DCP2Q8IU60 420 aaKnown RBP17.14■□□□□ 0.33
SMN1-201ENST00000351205 VOPP1Q96AW1 172 aa17.14■□□□□ 0.33
SMN1-201ENST00000351205 TBC1D31Q96DN5 1066 aa17.14■□□□□ 0.33
SMN1-201ENST00000351205 APOLD1Q96LR9 279 aa17.14■□□□□ 0.33
SMN1-201ENST00000351205 KLF6Q99612 283 aaPredicted RBP17.14■□□□□ 0.33
SMN1-201ENST00000351205 MAGEH1Q9H213 219 aa17.14■□□□□ 0.33
SMN1-201ENST00000351205 RETREG1Q9H6L5 497 aa17.14■□□□□ 0.33
SMN1-201ENST00000351205 NLGN3Q9NZ94 848 aa17.14■□□□□ 0.33
SMN1-201ENST00000351205 GGT7Q9UJ14 662 aa17.14■□□□□ 0.33
SMN1-201ENST00000351205 ITM2BQ9Y287 266 aa17.14■□□□□ 0.33
SMN1-201ENST00000351205 SIK3Q9Y2K2 1263 aa17.14■□□□□ 0.33
SMN1-201ENST00000351205 SHROOM3Q8TF72 1996 aa17.13■□□□□ 0.33
SMN1-201ENST00000351205 LY6G6EA0A0G2JKS1 128 aa17.13■□□□□ 0.33
SMN1-201ENST00000351205 SPTY2D1-AS1A0A0U1RR47 76 aa17.13■□□□□ 0.33
SMN1-201ENST00000351205 IGLON5A6NGN9 336 aa17.13■□□□□ 0.33
SMN1-201ENST00000351205 KRIT1O00522 736 aa17.13■□□□□ 0.33
SMN1-201ENST00000351205 SCAMP1O15126 338 aa17.13■□□□□ 0.33
SMN1-201ENST00000351205 SPINT1O43278 529 aa17.13■□□□□ 0.33
SMN1-201ENST00000351205 RAMP2O60895 175 aa17.13■□□□□ 0.33
SMN1-201ENST00000351205 GSRP00390 522 aa17.13■□□□□ 0.33
SMN1-201ENST00000351205 MT-CO3P00414 261 aa17.13■□□□□ 0.33
SMN1-201ENST00000351205 UGT2B4P06133 528 aa17.13■□□□□ 0.33
SMN1-201ENST00000351205 TPM2P07951 284 aa17.13■□□□□ 0.33
SMN1-201ENST00000351205 KRT3P12035 628 aa17.13■□□□□ 0.33
SMN1-201ENST00000351205 RFC1P35251 1148 aaPredicted RBP17.13■□□□□ 0.33
SMN1-201ENST00000351205 STAT1P42224 750 aa17.13■□□□□ 0.33
SMN1-201ENST00000351205 NSFP46459 744 aaKnown RBP17.13■□□□□ 0.33
SMN1-201ENST00000351205 RABIFP47224 123 aa17.13■□□□□ 0.33
SMN1-201ENST00000351205 GSCP56915 257 aaPredicted RBP17.13■□□□□ 0.33
SMN1-201ENST00000351205 HNRNPKP61978 463 aaKnown RBP eCLIP17.13■□□□□ 0.33
SMN1-201ENST00000351205 POLD3Q15054 466 aaPredicted RBP17.13■□□□□ 0.33
SMN1-201ENST00000351205 ZNF805Q5CZA5 627 aa17.13■□□□□ 0.33
SMN1-201ENST00000351205 TPRG1LQ5T0D9 272 aa17.13■□□□□ 0.33
SMN1-201ENST00000351205 KDM7AQ6ZMT4 941 aa17.13■□□□□ 0.33
SMN1-201ENST00000351205 PARGQ86W56 976 aa17.13■□□□□ 0.33
SMN1-201ENST00000351205 OR2AP1Q8NGE2 309 aa17.13■□□□□ 0.33
SMN1-201ENST00000351205 NTAN1Q96AB6 310 aa17.13■□□□□ 0.33
SMN1-201ENST00000351205 RAB7BQ96AH8 199 aa17.13■□□□□ 0.33
SMN1-201ENST00000351205 LENG8Q96PV6 779 aaPredicted RBP17.13■□□□□ 0.33
SMN1-201ENST00000351205 C1QTNF2Q9BXJ5 285 aa17.13■□□□□ 0.33
SMN1-201ENST00000351205 LMBRD1Q9NUN5 540 aa17.13■□□□□ 0.33
SMN1-201ENST00000351205 ADAM22Q9P0K1 906 aa17.13■□□□□ 0.33
SMN1-201ENST00000351205 HPCAL4Q9UM19 191 aa17.13■□□□□ 0.33
SMN1-201ENST00000351205 U3KQA8 63 aa17.13■□□□□ 0.33
SMN1-201ENST00000351205 NEMP2A6NFY4 417 aa17.12■□□□□ 0.33
SMN1-201ENST00000351205 K7ESM1 405 aa17.12■□□□□ 0.33
SMN1-201ENST00000351205 NEMP1O14524 444 aa17.12■□□□□ 0.33
SMN1-201ENST00000351205 FPGTO14772 594 aa17.12■□□□□ 0.33
SMN1-201ENST00000351205 TSPAN6O43657 245 aa17.12■□□□□ 0.33
SMN1-201ENST00000351205 CSF2P04141 144 aa17.12■□□□□ 0.33
SMN1-201ENST00000351205 NME1P15531 152 aaKnown RBP17.12■□□□□ 0.33
SMN1-201ENST00000351205 GPD1P21695 349 aa17.12■□□□□ 0.33
SMN1-201ENST00000351205 SNRPD1P62314 119 aaKnown RBP17.12■□□□□ 0.33
SMN1-201ENST00000351205 SGCGQ13326 291 aa17.12■□□□□ 0.33
SMN1-201ENST00000351205 PDE1CQ14123 709 aaPredicted RBP17.12■□□□□ 0.33
SMN1-201ENST00000351205 CLEC16AQ2KHT3 1053 aa17.12■□□□□ 0.33
SMN1-201ENST00000351205 ATXN7L2Q5T6C5 722 aaPredicted RBP17.12■□□□□ 0.33
SMN1-201ENST00000351205 LRRC69Q6ZNQ3 347 aa17.12■□□□□ 0.33
SMN1-201ENST00000351205 ZSCAN30Q86W11 494 aa17.12■□□□□ 0.33
SMN1-201ENST00000351205 FAM181AQ8N9Y4 354 aa17.12■□□□□ 0.33
SMN1-201ENST00000351205 ZNF548Q8NEK5 533 aaPredicted RBP17.12■□□□□ 0.33
SMN1-201ENST00000351205 SNIP1Q8TAD8 396 aaKnown RBP17.12■□□□□ 0.33
SMN1-201ENST00000351205 DUSP23Q9BVJ7 150 aa17.12■□□□□ 0.33
SMN1-201ENST00000351205 FANCLQ9NW38 375 aa17.12■□□□□ 0.33
SMN1-201ENST00000351205 KLF15Q9UIH9 416 aa17.12■□□□□ 0.33
SMN1-201ENST00000351205 DAAM1Q9Y4D1 1078 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms