RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 ZCWPW1Q9H0M4 648 aa15.64■□□□□ 0.09
UPF3B-202ENST00000345865 ENTPD7Q9NQZ7 604 aa15.64■□□□□ 0.09
UPF3B-202ENST00000345865 BATF3Q9NR55 127 aa15.64■□□□□ 0.09
UPF3B-202ENST00000345865 DNAJB4Q9UDY4 337 aa15.64■□□□□ 0.09
UPF3B-202ENST00000345865 ANKRD6Q9Y2G4 727 aa15.64■□□□□ 0.09
UPF3B-202ENST00000345865 FRMPD3Q5JV73 1810 aa15.64■□□□□ 0.09
UPF3B-202ENST00000345865 VWA8A3KMH1 1905 aa15.64■□□□□ 0.09
UPF3B-202ENST00000345865 MIA3Q5JRA6 1907 aa15.64■□□□□ 0.09
UPF3B-202ENST00000345865 FAM95CA0A1B0GW59 222 aa15.63■□□□□ 0.09
UPF3B-202ENST00000345865 J3KR12 359 aa15.63■□□□□ 0.09
UPF3B-202ENST00000345865 MATN2O00339 956 aa15.63■□□□□ 0.09
UPF3B-202ENST00000345865 CA12O43570 354 aa15.63■□□□□ 0.09
UPF3B-202ENST00000345865 CNTN5O94779 1100 aa15.63■□□□□ 0.09
UPF3B-202ENST00000345865 HAPLN1P10915 354 aaPredicted RBP15.63■□□□□ 0.09
UPF3B-202ENST00000345865 ACADSP16219 412 aa15.63■□□□□ 0.09
UPF3B-202ENST00000345865 SLC12A1Q13621 1099 aa15.63■□□□□ 0.09
UPF3B-202ENST00000345865 PCSK7Q16549 785 aa15.63■□□□□ 0.09
UPF3B-202ENST00000345865 TSTD2Q5T7W7 516 aa15.63■□□□□ 0.09
UPF3B-202ENST00000345865 LSMEM2Q8N112 164 aa15.63■□□□□ 0.09
UPF3B-202ENST00000345865 FSD1LQ9BXM9 530 aa15.63■□□□□ 0.09
UPF3B-202ENST00000345865 DRC3Q9H069 523 aa15.63■□□□□ 0.09
UPF3B-202ENST00000345865 ZDHHC2Q9UIJ5 367 aa15.63■□□□□ 0.09
UPF3B-202ENST00000345865 DLX3O60479 287 aa15.63■□□□□ 0.09
UPF3B-202ENST00000345865 CIB2O75838 187 aa15.63■□□□□ 0.09
UPF3B-202ENST00000345865 OAZ2O95190 189 aa15.63■□□□□ 0.09
UPF3B-202ENST00000345865 TBX18O95935 607 aa15.63■□□□□ 0.09
UPF3B-202ENST00000345865 GLDCP23378 1020 aa15.63■□□□□ 0.09
UPF3B-202ENST00000345865 NUMBP49757 651 aa15.63■□□□□ 0.09
UPF3B-202ENST00000345865 WNT3AP56704 352 aa15.63■□□□□ 0.09
UPF3B-202ENST00000345865 RAB10P61026 200 aa15.63■□□□□ 0.09
UPF3B-202ENST00000345865 MAXP61244 160 aa15.63■□□□□ 0.09
UPF3B-202ENST00000345865 ALFQ53S48 1182 aa15.63■□□□□ 0.09
UPF3B-202ENST00000345865 ZNF789Q5FWF6 425 aa15.63■□□□□ 0.09
UPF3B-202ENST00000345865 CFAP157Q5JU67 520 aa15.63■□□□□ 0.09
UPF3B-202ENST00000345865 LRRC8EQ6NSJ5 796 aa15.63■□□□□ 0.09
UPF3B-202ENST00000345865 KDELC1Q6UW63 502 aa15.63■□□□□ 0.09
UPF3B-202ENST00000345865 EFCAB3Q8N7B9 438 aa15.63■□□□□ 0.09
UPF3B-202ENST00000345865 SCYL1Q96KG9 808 aa15.63■□□□□ 0.09
UPF3B-202ENST00000345865 SERPINB11Q96P15 392 aa15.63■□□□□ 0.09
UPF3B-202ENST00000345865 OMDQ99983 421 aa15.63■□□□□ 0.09
UPF3B-202ENST00000345865 ILKAPQ9H0C8 392 aaPredicted RBP15.63■□□□□ 0.09
UPF3B-202ENST00000345865 CYP4F11Q9HBI6 524 aa15.63■□□□□ 0.09
UPF3B-202ENST00000345865 XPR1Q9UBH6 696 aa15.63■□□□□ 0.09
UPF3B-202ENST00000345865 ZNF212Q9UDV6 495 aa15.63■□□□□ 0.09
UPF3B-202ENST00000345865 PPM1HQ9ULR3 514 aa15.63■□□□□ 0.09
UPF3B-202ENST00000345865 SCML2Q9UQR0 700 aa15.63■□□□□ 0.09
UPF3B-202ENST00000345865 NOD1Q9Y239 953 aa15.63■□□□□ 0.09
UPF3B-202ENST00000345865 PRG3Q9Y2Y8 225 aaPredicted RBP15.63■□□□□ 0.09
UPF3B-202ENST00000345865 ACOT9Q9Y305 439 aa15.63■□□□□ 0.09
UPF3B-202ENST00000345865 PLXNA3P51805 1871 aa15.62■□□□□ 0.09
UPF3B-202ENST00000345865 TTC24A2A3L6 582 aaPredicted RBP15.62■□□□□ 0.09
UPF3B-202ENST00000345865 GRID2O43424 1007 aa15.62■□□□□ 0.09
UPF3B-202ENST00000345865 CABYRO75952 493 aa15.62■□□□□ 0.09
UPF3B-202ENST00000345865 PDE5AO76074 875 aa15.62■□□□□ 0.09
UPF3B-202ENST00000345865 PIGNO95427 931 aa15.62■□□□□ 0.09
UPF3B-202ENST00000345865 JUNP05412 331 aaKnown RBP15.62■□□□□ 0.09
UPF3B-202ENST00000345865 PRKAR2AP13861 404 aaKnown RBP15.62■□□□□ 0.09
UPF3B-202ENST00000345865 ANPEPP15144 967 aa15.62■□□□□ 0.09
UPF3B-202ENST00000345865 ITGAXP20702 1163 aa15.62■□□□□ 0.09
UPF3B-202ENST00000345865 TAS2R39P59534 338 aa15.62■□□□□ 0.09
UPF3B-202ENST00000345865 NRG1Q02297 640 aaPredicted RBP15.62■□□□□ 0.09
UPF3B-202ENST00000345865 KLF10Q13118 480 aa15.62■□□□□ 0.09
UPF3B-202ENST00000345865 ZNF470Q6ECI4 717 aa15.62■□□□□ 0.09
UPF3B-202ENST00000345865 TIGD7Q6NT04 549 aaPredicted RBP15.62■□□□□ 0.09
UPF3B-202ENST00000345865 PGM2L1Q6PCE3 622 aa15.62■□□□□ 0.09
UPF3B-202ENST00000345865 TRAF7Q6Q0C0 670 aa15.62■□□□□ 0.09
UPF3B-202ENST00000345865 MON1AQ86VX9 555 aa15.62■□□□□ 0.09
UPF3B-202ENST00000345865 CCDC117Q8IWD4 279 aaPredicted RBP15.62■□□□□ 0.09
UPF3B-202ENST00000345865 COLGALT2Q8IYK4 626 aa15.62■□□□□ 0.09
UPF3B-202ENST00000345865 NUP93Q8N1F7 819 aa15.62■□□□□ 0.09
UPF3B-202ENST00000345865 C2CD4AQ8NCU7 369 aaPredicted RBP15.62■□□□□ 0.09
UPF3B-202ENST00000345865 FAM136AQ96C01 138 aa15.62■□□□□ 0.09
UPF3B-202ENST00000345865 HMCESQ96FZ2 354 aa15.62■□□□□ 0.09
UPF3B-202ENST00000345865 KLHL5Q96PQ7 755 aa15.62■□□□□ 0.09
UPF3B-202ENST00000345865 TCF7L2Q9NQB0 619 aa15.62■□□□□ 0.09
UPF3B-202ENST00000345865 PRDM5Q9NQX1 630 aaPredicted RBP15.62■□□□□ 0.09
UPF3B-202ENST00000345865 RGS18Q9NS28 235 aa15.62■□□□□ 0.09
UPF3B-202ENST00000345865 GMIPQ9P107 970 aa15.62■□□□□ 0.09
UPF3B-202ENST00000345865 TLR6Q9Y2C9 796 aa15.62■□□□□ 0.09
UPF3B-202ENST00000345865 RAP2CQ9Y3L5 183 aa15.62■□□□□ 0.09
UPF3B-202ENST00000345865 TMEM88BA6NKF7 163 aa15.62■□□□□ 0.09
UPF3B-202ENST00000345865 WASH4PA8MWX3 477 aa15.62■□□□□ 0.09
UPF3B-202ENST00000345865 NEMP1O14524 444 aa15.62■□□□□ 0.09
UPF3B-202ENST00000345865 H2AFYO75367 372 aaKnown RBP15.62■□□□□ 0.09
UPF3B-202ENST00000345865 SOAT2O75908 522 aa15.62■□□□□ 0.09
UPF3B-202ENST00000345865 APOA4P06727 396 aa15.62■□□□□ 0.09
UPF3B-202ENST00000345865 PDHA1P08559 390 aa15.62■□□□□ 0.09
UPF3B-202ENST00000345865 SKIP12755 728 aa15.62■□□□□ 0.09
UPF3B-202ENST00000345865 COX4I1P13073 169 aa15.62■□□□□ 0.09
UPF3B-202ENST00000345865 TFEBP19484 476 aa15.62■□□□□ 0.09
UPF3B-202ENST00000345865 PAX3P23760 479 aa15.62■□□□□ 0.09
UPF3B-202ENST00000345865 EPHA3P29320 983 aa15.62■□□□□ 0.09
UPF3B-202ENST00000345865 OR1G1P47890 313 aa15.62■□□□□ 0.09
UPF3B-202ENST00000345865 SLC10A7Q0GE19 358 aa15.62■□□□□ 0.09
UPF3B-202ENST00000345865 MSLNQ13421 630 aaPredicted RBP15.62■□□□□ 0.09
UPF3B-202ENST00000345865 SEPT6Q14141 434 aa15.62■□□□□ 0.09
UPF3B-202ENST00000345865 TSNAXIP1Q2TAA8 658 aa15.62■□□□□ 0.09
UPF3B-202ENST00000345865 RBM20Q5T481 1227 aaKnown RBP15.62■□□□□ 0.09
UPF3B-202ENST00000345865 CNSTQ6PJW8 725 aa15.62■□□□□ 0.09
UPF3B-202ENST00000345865 RDH11Q8TC12 318 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms