RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 MILR1Q7Z6M3 343 aa13.47□□□□□ -0.25
CASC4-202ENST00000345795 SEPT8Q92599 483 aa13.47□□□□□ -0.25
CASC4-202ENST00000345795 TUBGCP3Q96CW5 907 aa13.47□□□□□ -0.25
CASC4-202ENST00000345795 MTFMTQ96DP5 389 aaKnown RBP13.47□□□□□ -0.25
CASC4-202ENST00000345795 CIPCQ9C0C6 399 aa13.47□□□□□ -0.25
CASC4-202ENST00000345795 GLOD4Q9HC38 313 aa13.47□□□□□ -0.25
CASC4-202ENST00000345795 TCF7L2Q9NQB0 619 aa13.47□□□□□ -0.25
CASC4-202ENST00000345795 SLC4A7Q9Y6M7 1214 aa13.47□□□□□ -0.25
CASC4-202ENST00000345795 C5orf42Q9H799 3197 aa13.47□□□□□ -0.25
CASC4-202ENST00000345795 ARHGEF37A1IGU5 675 aa13.47□□□□□ -0.25
CASC4-202ENST00000345795 C5orf60A6NFR6 353 aa13.47□□□□□ -0.25
CASC4-202ENST00000345795 MAP3K7O43318 606 aa13.47□□□□□ -0.25
CASC4-202ENST00000345795 TRIM13O60858 407 aa13.47□□□□□ -0.25
CASC4-202ENST00000345795 GCATO75600 419 aa13.47□□□□□ -0.25
CASC4-202ENST00000345795 SIX3O95343 332 aaPredicted RBP13.47□□□□□ -0.25
CASC4-202ENST00000345795 GJB5O95377 273 aa13.47□□□□□ -0.25
CASC4-202ENST00000345795 PTPN4P29074 926 aa13.47□□□□□ -0.25
CASC4-202ENST00000345795 OXCT1P55809 520 aa13.47□□□□□ -0.25
CASC4-202ENST00000345795 STX1BP61266 288 aa13.47□□□□□ -0.25
CASC4-202ENST00000345795 ARL13AQ5H913 290 aaPredicted RBP13.47□□□□□ -0.25
CASC4-202ENST00000345795 SPDYCQ5MJ68 293 aa13.47□□□□□ -0.25
CASC4-202ENST00000345795 FUT10Q6P4F1 479 aa13.47□□□□□ -0.25
CASC4-202ENST00000345795 CYP4V2Q6ZWL3 525 aaPredicted RBP13.47□□□□□ -0.25
CASC4-202ENST00000345795 CNTD1Q8N815 330 aa13.47□□□□□ -0.25
CASC4-202ENST00000345795 RAB3IL1Q8TBN0 382 aa13.47□□□□□ -0.25
CASC4-202ENST00000345795 SPDL1Q96EA4 605 aa13.47□□□□□ -0.25
CASC4-202ENST00000345795 TMEM109Q9BVC6 243 aa13.47□□□□□ -0.25
CASC4-202ENST00000345795 FRMD8P1Q9BZ68 369 aaPredicted RBP13.47□□□□□ -0.25
CASC4-202ENST00000345795 SEMA6AQ9H2E6 1030 aa13.47□□□□□ -0.25
CASC4-202ENST00000345795 COG4Q9H9E3 785 aa13.47□□□□□ -0.25
CASC4-202ENST00000345795 THAP1Q9NVV9 213 aa13.47□□□□□ -0.25
CASC4-202ENST00000345795 MOSPD1Q9UJG1 213 aa13.47□□□□□ -0.25
CASC4-202ENST00000345795 EFR3BQ9Y2G0 817 aa13.47□□□□□ -0.25
CASC4-202ENST00000345795 MBLAC1A4D2B0 266 aaPredicted RBP13.46□□□□□ -0.25
CASC4-202ENST00000345795 STX16-NPEPL1H3BU86 382 aa13.46□□□□□ -0.25
CASC4-202ENST00000345795 RFPL1O75677 317 aa13.46□□□□□ -0.25
CASC4-202ENST00000345795 TFEBP19484 476 aa13.46□□□□□ -0.25
CASC4-202ENST00000345795 CES1P23141 567 aa13.46□□□□□ -0.25
CASC4-202ENST00000345795 GEMP55040 296 aa13.46□□□□□ -0.25
CASC4-202ENST00000345795 AGKQ53H12 422 aa13.46□□□□□ -0.25
CASC4-202ENST00000345795 RTP2Q5QGT7 225 aa13.46□□□□□ -0.25
CASC4-202ENST00000345795 ZNF467Q7Z7K2 595 aaPredicted RBP13.46□□□□□ -0.25
CASC4-202ENST00000345795 SERINC5Q86VE9 423 aa13.46□□□□□ -0.25
CASC4-202ENST00000345795 HPS6Q86YV9 775 aa13.46□□□□□ -0.25
CASC4-202ENST00000345795 SCUBE1Q8IWY4 988 aa13.46□□□□□ -0.25
CASC4-202ENST00000345795 KLHDC9Q8NEP7 349 aa13.46□□□□□ -0.25
CASC4-202ENST00000345795 GDAP2Q9NXN4 497 aa13.46□□□□□ -0.25
CASC4-202ENST00000345795 CD274Q9NZQ7 290 aa13.46□□□□□ -0.25
CASC4-202ENST00000345795 DCDC2Q9UHG0 476 aa13.46□□□□□ -0.25
CASC4-202ENST00000345795 ZMYM5Q9UJ78 669 aa13.46□□□□□ -0.25
CASC4-202ENST00000345795 COL11A1P12107 1806 aaPredicted RBP13.46□□□□□ -0.25
CASC4-202ENST00000345795 ADAM12O43184 909 aa13.46□□□□□ -0.25
CASC4-202ENST00000345795 GGT5P36269 586 aa13.46□□□□□ -0.25
CASC4-202ENST00000345795 RENBPP51606 427 aa13.46□□□□□ -0.25
CASC4-202ENST00000345795 RHOAP61586 193 aa13.46□□□□□ -0.25
CASC4-202ENST00000345795 NOGQ13253 232 aa13.46□□□□□ -0.25
CASC4-202ENST00000345795 ZBTB6Q15916 424 aa13.46□□□□□ -0.25
CASC4-202ENST00000345795 SEL1L3Q68CR1 1132 aa13.46□□□□□ -0.25
CASC4-202ENST00000345795 TXNDC8Q6A555 127 aa13.46□□□□□ -0.25
CASC4-202ENST00000345795 ARL14EPQ8N8R7 260 aaPredicted RBP13.46□□□□□ -0.25
CASC4-202ENST00000345795 ACBD6Q9BR61 282 aa13.46□□□□□ -0.25
CASC4-202ENST00000345795 ENTPD7Q9NQZ7 604 aa13.46□□□□□ -0.25
CASC4-202ENST00000345795 NDE1Q9NXR1 346 aa13.46□□□□□ -0.25
CASC4-202ENST00000345795 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.46□□□□□ -0.251e-14■■■■□ 26
CASC4-202ENST00000345795 TRPM5Q9NZQ8 1165 aa13.46□□□□□ -0.25
CASC4-202ENST00000345795 DLGAP2Q9P1A6 1054 aa13.46□□□□□ -0.25
CASC4-202ENST00000345795 THEGQ9P2T0 379 aa13.46□□□□□ -0.25
CASC4-202ENST00000345795 DERAQ9Y315 318 aa13.46□□□□□ -0.25
CASC4-202ENST00000345795 FCF1Q9Y324 198 aaKnown RBP13.46□□□□□ -0.25
CASC4-202ENST00000345795 TIMM22Q9Y584 194 aa13.46□□□□□ -0.25
CASC4-202ENST00000345795 ARHGAP10A1A4S6 786 aa13.46□□□□□ -0.26
CASC4-202ENST00000345795 IRAK2O43187 625 aa13.46□□□□□ -0.26
CASC4-202ENST00000345795 BAIAP3O94812 1187 aa13.46□□□□□ -0.26
CASC4-202ENST00000345795 AP2A1O95782 977 aa13.46□□□□□ -0.26
CASC4-202ENST00000345795 MT-ND1P03886 318 aa13.46□□□□□ -0.26
CASC4-202ENST00000345795 SERPINE1P05121 402 aa13.46□□□□□ -0.26
CASC4-202ENST00000345795 CYTH1Q15438 398 aa13.46□□□□□ -0.26
CASC4-202ENST00000345795 RASIP1Q5U651 963 aa13.46□□□□□ -0.26
CASC4-202ENST00000345795 LRRC8BQ6P9F7 803 aa13.46□□□□□ -0.26
CASC4-202ENST00000345795 PHTF2Q8N3S3 785 aa13.46□□□□□ -0.26
CASC4-202ENST00000345795 CXorf38Q8TB03 319 aa13.46□□□□□ -0.26
CASC4-202ENST00000345795 WDR60Q8WVS4 1066 aa13.46□□□□□ -0.26
CASC4-202ENST00000345795 C10orf82Q8WW14 230 aa13.46□□□□□ -0.26
CASC4-202ENST00000345795 SPATA17Q96L03 361 aa13.46□□□□□ -0.26
CASC4-202ENST00000345795 ZYG11BQ9C0D3 744 aa13.46□□□□□ -0.26
CASC4-202ENST00000345795 NCKIPSDQ9NZQ3 722 aa13.46□□□□□ -0.26
CASC4-202ENST00000345795 PTCH2Q9Y6C5 1203 aa13.46□□□□□ -0.26
CASC4-202ENST00000345795 AHSGP02765 367 aa13.45□□□□□ -0.26
CASC4-202ENST00000345795 SERPINF2P08697 491 aa13.45□□□□□ -0.26
CASC4-202ENST00000345795 PBLDP30039 288 aaPredicted RBP13.45□□□□□ -0.26
CASC4-202ENST00000345795 SLC1A2P43004 574 aa13.45□□□□□ -0.26
CASC4-202ENST00000345795 SLC11A2P49281 568 aa13.45□□□□□ -0.26
CASC4-202ENST00000345795 SERPINH1P50454 418 aaKnown RBP13.45□□□□□ -0.26
CASC4-202ENST00000345795 MRPS22P82650 360 aaKnown RBP13.45□□□□□ -0.26
CASC4-202ENST00000345795 TCEAL1Q15170 157 aa13.45□□□□□ -0.26
CASC4-202ENST00000345795 ANGPTL8Q6UXH0 198 aa13.45□□□□□ -0.26
CASC4-202ENST00000345795 GLT6D1Q7Z4J2 308 aa13.45□□□□□ -0.26
CASC4-202ENST00000345795 TREML1Q86YW5 311 aa13.45□□□□□ -0.26
CASC4-202ENST00000345795 NPAS2Q99743 824 aa13.45□□□□□ -0.26
CASC4-202ENST00000345795 BTBD10Q9BSF8 475 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms