RNA–Protein interactions for RNA: ENST00000344586.8

NKX2-3-201, Transcript of NK2 homeobox 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NKX2-3, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3-201ENST00000344586 SMOQ99835 787 aa23.42■■□□□ 1.34
NKX2-3-201ENST00000344586 OCEL1Q9H607 264 aa23.42■■□□□ 1.34
NKX2-3-201ENST00000344586 TMEM30AQ9NV96 361 aa23.42■■□□□ 1.34
NKX2-3-201ENST00000344586 GNEQ9Y223 722 aaKnown RBP23.42■■□□□ 1.34
NKX2-3-201ENST00000344586 SHROOM3Q8TF72 1996 aa23.42■■□□□ 1.34
NKX2-3-201ENST00000344586 SDHDO14521 159 aa23.41■■□□□ 1.34
NKX2-3-201ENST00000344586 TNFAIP8O95379 198 aa23.41■■□□□ 1.34
NKX2-3-201ENST00000344586 USP17L7P0C7H9 530 aa23.41■■□□□ 1.34
NKX2-3-201ENST00000344586 AXLP30530 894 aa23.41■■□□□ 1.34
NKX2-3-201ENST00000344586 CLCN2P51788 898 aa23.41■■□□□ 1.34
NKX2-3-201ENST00000344586 NADK2Q4G0N4 442 aa23.41■■□□□ 1.34
NKX2-3-201ENST00000344586 DUSP28Q4G0W2 176 aa23.41■■□□□ 1.34
NKX2-3-201ENST00000344586 ARHGAP22Q7Z5H3 698 aa23.41■■□□□ 1.34
NKX2-3-201ENST00000344586 LINC00523Q86TU6 105 aa23.41■■□□□ 1.34
NKX2-3-201ENST00000344586 SPATA6LQ8N4H0 392 aa23.41■■□□□ 1.34
NKX2-3-201ENST00000344586 CCNYL1Q8N7R7 359 aa23.41■■□□□ 1.34
NKX2-3-201ENST00000344586 TMEM102Q8N9M5 508 aaPredicted RBP23.41■■□□□ 1.34
NKX2-3-201ENST00000344586 FAM156AQ8NDB6 213 aa23.41■■□□□ 1.34
NKX2-3-201ENST00000344586 SPATA22Q8NHS9 363 aa23.41■■□□□ 1.34
NKX2-3-201ENST00000344586 USP33Q8TEY7 942 aa23.41■■□□□ 1.34
NKX2-3-201ENST00000344586 TSPAN18Q96SJ8 248 aa23.41■■□□□ 1.34
NKX2-3-201ENST00000344586 RBM38Q9H0Z9 239 aaKnown RBP23.41■■□□□ 1.34
NKX2-3-201ENST00000344586 SUDS3Q9H7L9 328 aaPredicted RBP23.41■■□□□ 1.34
NKX2-3-201ENST00000344586 PTTG2Q9NZH5 202 aa23.41■■□□□ 1.34
NKX2-3-201ENST00000344586 OR12D3Q9UGF7 316 aa23.41■■□□□ 1.34
NKX2-3-201ENST00000344586 APPL1Q9UKG1 709 aa23.41■■□□□ 1.34
NKX2-3-201ENST00000344586 FNDC1Q4ZHG4 1894 aaPredicted RBP23.41■■□□□ 1.34
NKX2-3-201ENST00000344586 FAM95CA0A1B0GW59 222 aa23.4■■□□□ 1.34
NKX2-3-201ENST00000344586 CACNG3O60359 315 aa23.4■■□□□ 1.34
NKX2-3-201ENST00000344586 NPHS1O60500 1241 aa23.4■■□□□ 1.34
NKX2-3-201ENST00000344586 LRIG2O94898 1065 aa23.4■■□□□ 1.34
NKX2-3-201ENST00000344586 SMIM10L2AP0DMW4 78 aa23.4■■□□□ 1.34
NKX2-3-201ENST00000344586 SMIM10L2BP0DMW5 78 aa23.4■■□□□ 1.34
NKX2-3-201ENST00000344586 DNAJB2P25686 324 aa23.4■■□□□ 1.34
NKX2-3-201ENST00000344586 CTBP1Q13363 440 aa23.4■■□□□ 1.34
NKX2-3-201ENST00000344586 TTLL12Q14166 644 aaPredicted RBP23.4■■□□□ 1.34
NKX2-3-201ENST00000344586 BHLHA9Q7RTU4 235 aa23.4■■□□□ 1.34
NKX2-3-201ENST00000344586 PELI3Q8N2H9 469 aa23.4■■□□□ 1.34
NKX2-3-201ENST00000344586 ZMIZ2Q8NF64 920 aa23.4■■□□□ 1.34
NKX2-3-201ENST00000344586 ZFRQ96KR1 1074 aaKnown RBP23.4■■□□□ 1.34
NKX2-3-201ENST00000344586 OMDQ99983 421 aa23.4■■□□□ 1.34
NKX2-3-201ENST00000344586 UNKQ9C0B0 810 aaKnown RBP23.4■■□□□ 1.34
NKX2-3-201ENST00000344586 TKTL2Q9H0I9 626 aa23.4■■□□□ 1.34
NKX2-3-201ENST00000344586 CNGB3Q9NQW8 809 aa23.4■■□□□ 1.34
NKX2-3-201ENST00000344586 BPTFQ12830 3046 aa23.4■■□□□ 1.34
NKX2-3-201ENST00000344586 MYOCOSA0A1B0GUC4 107 aa23.4■■□□□ 1.34
NKX2-3-201ENST00000344586 HSPA1AP0DMV8 641 aaKnown RBP23.4■■□□□ 1.34
NKX2-3-201ENST00000344586 HSPA1BP0DMV9 641 aaKnown RBP23.4■■□□□ 1.34
NKX2-3-201ENST00000344586 ARNTP27540 789 aa23.4■■□□□ 1.34
NKX2-3-201ENST00000344586 HSPA13P48723 471 aa23.4■■□□□ 1.34
NKX2-3-201ENST00000344586 SNX17Q15036 470 aa23.4■■□□□ 1.34
NKX2-3-201ENST00000344586 UGP2Q16851 508 aa23.4■■□□□ 1.34
NKX2-3-201ENST00000344586 LARP7Q4G0J3 582 aaKnown RBP eCLIP23.4■■□□□ 1.34
NKX2-3-201ENST00000344586 PCID2Q5JVF3 399 aa23.4■■□□□ 1.34
NKX2-3-201ENST00000344586 SH2D4BQ5SQS7 431 aa23.4■■□□□ 1.34
NKX2-3-201ENST00000344586 FAM35AQ86V20 835 aa23.4■■□□□ 1.34
NKX2-3-201ENST00000344586 TXNDC5Q8NBS9 432 aaKnown RBP23.4■■□□□ 1.34
NKX2-3-201ENST00000344586 GPRC5AQ8NFJ5 357 aa23.4■■□□□ 1.34
NKX2-3-201ENST00000344586 MPP4Q96JB8 637 aa23.4■■□□□ 1.34
NKX2-3-201ENST00000344586 FTHL17Q9BXU8 183 aa23.4■■□□□ 1.34
NKX2-3-201ENST00000344586 ADARB2Q9NS39 739 aaKnown RBP23.4■■□□□ 1.34
NKX2-3-201ENST00000344586 IPPQ9Y573 584 aa23.4■■□□□ 1.34
NKX2-3-201ENST00000344586 SMIM35A0A1B0GVV1 85 aa23.39■■□□□ 1.34
NKX2-3-201ENST00000344586 TRIM38O00635 465 aa23.39■■□□□ 1.34
NKX2-3-201ENST00000344586 RNASEH2AO75792 299 aaKnown RBP23.39■■□□□ 1.34
NKX2-3-201ENST00000344586 DDNO94850 711 aaPredicted RBP23.39■■□□□ 1.34
NKX2-3-201ENST00000344586 STMN1P16949 149 aa23.39■■□□□ 1.34
NKX2-3-201ENST00000344586 ARCN1P48444 511 aaKnown RBP23.39■■□□□ 1.34
NKX2-3-201ENST00000344586 APOFQ13790 326 aa23.39■■□□□ 1.34
NKX2-3-201ENST00000344586 MAP7Q14244 749 aa23.39■■□□□ 1.34
NKX2-3-201ENST00000344586 PTK2BQ14289 1009 aa23.39■■□□□ 1.34
NKX2-3-201ENST00000344586 POU6F1Q14863 301 aa23.39■■□□□ 1.34
NKX2-3-201ENST00000344586 USP41Q3LFD5 358 aa23.39■■□□□ 1.34
NKX2-3-201ENST00000344586 RAB41Q5JT25 222 aa23.39■■□□□ 1.34
NKX2-3-201ENST00000344586 GK5Q6ZS86 529 aa23.39■■□□□ 1.34
NKX2-3-201ENST00000344586 GALNT4Q8N4A0 578 aa23.39■■□□□ 1.34
NKX2-3-201ENST00000344586 SMG8Q8ND04 991 aaKnown RBP23.39■■□□□ 1.34
NKX2-3-201ENST00000344586 EDEM1Q92611 657 aa23.39■■□□□ 1.34
NKX2-3-201ENST00000344586 TSGA13Q96PP4 275 aa23.39■■□□□ 1.34
NKX2-3-201ENST00000344586 TBL1YQ9BQ87 522 aa23.39■■□□□ 1.34
NKX2-3-201ENST00000344586 GRIP2Q9C0E4 1043 aa23.39■■□□□ 1.34
NKX2-3-201ENST00000344586 PSMD3O43242 534 aa23.39■■□□□ 1.33
NKX2-3-201ENST00000344586 TCN1P20061 433 aaPredicted RBP23.39■■□□□ 1.33
NKX2-3-201ENST00000344586 LRPAP1P30533 357 aa23.39■■□□□ 1.33
NKX2-3-201ENST00000344586 CXCR3P49682 368 aa23.39■■□□□ 1.33
NKX2-3-201ENST00000344586 CREB5Q02930 508 aa23.39■■□□□ 1.33
NKX2-3-201ENST00000344586 KLHDC10Q6PID8 442 aa23.39■■□□□ 1.33
NKX2-3-201ENST00000344586 ARHGAP36Q6ZRI8 547 aa23.39■■□□□ 1.33
NKX2-3-201ENST00000344586 ZNF467Q7Z7K2 595 aaPredicted RBP23.39■■□□□ 1.33
NKX2-3-201ENST00000344586 ZNF419Q96HQ0 510 aaPredicted RBP23.39■■□□□ 1.33
NKX2-3-201ENST00000344586 SLC2A11Q9BYW1 496 aa23.39■■□□□ 1.33
NKX2-3-201ENST00000344586 OSBPL2Q9H1P3 480 aa23.39■■□□□ 1.33
NKX2-3-201ENST00000344586 MRPL46Q9H2W6 279 aaKnown RBP23.39■■□□□ 1.33
NKX2-3-201ENST00000344586 WDCPQ9H6R7 721 aa23.39■■□□□ 1.33
NKX2-3-201ENST00000344586 PCDHGA7Q9Y5G6 932 aa23.39■■□□□ 1.33
NKX2-3-201ENST00000344586 MBLAC1A4D2B0 266 aaPredicted RBP23.38■■□□□ 1.33
NKX2-3-201ENST00000344586 TRPC5OSA6NMA1 111 aa23.38■■□□□ 1.33
NKX2-3-201ENST00000344586 KCNU1A8MYU2 1149 aa23.38■■□□□ 1.33
NKX2-3-201ENST00000344586 PTGESO14684 152 aa23.38■■□□□ 1.33
NKX2-3-201ENST00000344586 MT-CYBP00156 380 aaPredicted RBP23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms