RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 PRRG3Q9BZD7 231 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 EIF2B3Q9NR50 452 aaKnown RBP4.83□□□□□ -1.64
CSMD3-203ENST00000343508 PIH1D1Q9NWS0 290 aaKnown RBP4.83□□□□□ -1.64
CSMD3-203ENST00000343508 COQ6Q9Y2Z9 468 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 COL14A1Q05707 1796 aaKnown RBP4.83□□□□□ -1.64
CSMD3-203ENST00000343508 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.83□□□□□ -1.64
CSMD3-203ENST00000343508 C5orf58C9J3I9 102 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 HSMCR30P0CW71 290 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 TFEBP19484 476 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 SPIRE1Q08AE8 756 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 DLG1Q12959 904 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 NR6A1Q15406 480 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 TTC23LQ6PF05 361 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 SLC26A9Q7LBE3 791 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 SZRD1Q7Z422 152 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 FAM83AQ86UY5 434 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 HEATR4Q86WZ0 1026 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 PSMA8Q8TAA3 256 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 PROX1Q92786 737 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 DPY30Q9C005 99 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 ADAM7Q9H2U9 754 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 COQ10BQ9H8M1 238 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 PCDH18Q9HCL0 1135 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 GPATCH2LQ9NWQ4 482 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 TRAF6Q9Y4K3 522 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 DCAF8L1A6NGE4 600 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 ZNF682O95780 498 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 LRRC74AQ0VAA2 488 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 LSAMPQ13449 338 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 HERC3Q15034 1050 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 ANGPT1Q15389 498 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 C15orf59Q2T9L4 293 aaPredicted RBP4.83□□□□□ -1.64
CSMD3-203ENST00000343508 SLC25A52Q3SY17 297 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 ZBED5Q49AG3 693 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 RALGPS1Q5JS13 557 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 STYK1Q6J9G0 422 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 FAM43BQ6ZT52 329 aaPredicted RBP4.83□□□□□ -1.64
CSMD3-203ENST00000343508 CLYBLQ8N0X4 340 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 CENPNQ96H22 339 aaPredicted RBP4.83□□□□□ -1.64
CSMD3-203ENST00000343508 APOL2Q9BQE5 337 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 TMEM216Q9P0N5 145 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 TMEM150BA6NC51 233 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 SNPHO15079 494 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 CLCN5P51795 746 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 ITGA1P56199 1179 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 PRKG2Q13237 762 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 MAPKAPK3Q16644 382 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 LSM12Q3MHD2 195 aaKnown RBP4.83□□□□□ -1.64
CSMD3-203ENST00000343508 TRIQKQ629K1 86 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 THOC7Q6I9Y2 204 aaKnown RBP4.83□□□□□ -1.64
CSMD3-203ENST00000343508 FAM183BPQ6ZVS7 135 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 BNIPLQ7Z465 357 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 FAM228AQ86W67 206 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 SLC41A1Q8IVJ1 513 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 MARVELD2Q8N4S9 558 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 ATP6V0D2Q8N8Y2 350 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 PTCD2Q8WV60 388 aaKnown RBP4.83□□□□□ -1.64
CSMD3-203ENST00000343508 FOPNLQ96NB1 174 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 RHOJQ9H4E5 214 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 RBM22Q9NW64 420 aaKnown RBP eCLIP4.83□□□□□ -1.64
CSMD3-203ENST00000343508 SUCOQ9UBS9 1254 aaKnown RBP4.83□□□□□ -1.64
CSMD3-203ENST00000343508 TBC1D30Q9Y2I9 924 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 FGF10O15520 208 aaPredicted RBP4.83□□□□□ -1.64
CSMD3-203ENST00000343508 PPP1R11O60927 126 aaPredicted RBP4.83□□□□□ -1.64
CSMD3-203ENST00000343508 CCR1P32246 355 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 RPS9P46781 194 aaKnown RBP4.83□□□□□ -1.64
CSMD3-203ENST00000343508 TWF1Q12792 350 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 RBM48Q5RL73 367 aaKnown RBP4.83□□□□□ -1.64
CSMD3-203ENST00000343508 PERM1Q5SV97 790 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 ENKURQ8TC29 256 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 ING3Q9NXR8 418 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 WWOXQ9NZC7 414 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 AFF4Q9UHB7 1163 aaKnown RBP4.83□□□□□ -1.64
CSMD3-203ENST00000343508 PHF24Q9UPV7 400 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 CORO2BQ9UQ03 480 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 NCF1BA6NI72 391 aaPredicted RBP4.83□□□□□ -1.64
CSMD3-203ENST00000343508 NCF1CA8MVU1 366 aaPredicted RBP4.83□□□□□ -1.64
CSMD3-203ENST00000343508 KCNK1O00180 336 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 LYPLA1O75608 230 aaPredicted RBP4.83□□□□□ -1.64
CSMD3-203ENST00000343508 NCF1P14598 390 aaPredicted RBP4.83□□□□□ -1.64
CSMD3-203ENST00000343508 CYP2C18P33260 490 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 SLC26A3P40879 764 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 CCNFP41002 786 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 FCHO2Q0JRZ9 810 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 TRIM32Q13049 653 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 PLEKHG6Q3KR16 790 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 POTEHQ6S545 545 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 PRR23CQ6ZRP0 262 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 KCTD8Q6ZWB6 473 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 ZNF410Q86VK4 478 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 XYLT1Q86Y38 959 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 SLC35B2Q8TB61 432 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 MCRS1Q96EZ8 462 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 CPB2Q96IY4 423 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 RHOBTB2Q9BYZ6 727 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 DDX4Q9NQI0 724 aaKnown RBP4.83□□□□□ -1.64
CSMD3-203ENST00000343508 IFT80Q9P2H3 777 aaPredicted RBP4.83□□□□□ -1.64
CSMD3-203ENST00000343508 RPS6KA6Q9UK32 745 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 ASB3Q9Y575 518 aa4.83□□□□□ -1.64
CSMD3-203ENST00000343508 TNPO3Q9Y5L0 923 aaKnown RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms