RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 TMEM26Q6ZUK4 368 aa9.79□□□□□ -0.84
HOXA1-201ENST00000343060 SPRED1Q7Z699 444 aa9.79□□□□□ -0.84
HOXA1-201ENST00000343060 ZNF567Q8N184 647 aa9.79□□□□□ -0.84
HOXA1-201ENST00000343060 SEPT8Q92599 483 aa9.79□□□□□ -0.84
HOXA1-201ENST00000343060 ATG4CQ96DT6 458 aa9.79□□□□□ -0.84
HOXA1-201ENST00000343060 ATXN7L3BQ96GX2 97 aa9.79□□□□□ -0.84
HOXA1-201ENST00000343060 WNK4Q96J92 1243 aa9.79□□□□□ -0.84
HOXA1-201ENST00000343060 FEM1CQ96JP0 617 aa9.79□□□□□ -0.84
HOXA1-201ENST00000343060 SLC45A3Q96JT2 553 aa9.79□□□□□ -0.84
HOXA1-201ENST00000343060 APBA2Q99767 749 aa9.79□□□□□ -0.84
HOXA1-201ENST00000343060 UPF3AQ9H1J1 476 aaKnown RBP9.79□□□□□ -0.84
HOXA1-201ENST00000343060 CDT1Q9H211 546 aa9.79□□□□□ -0.84
HOXA1-201ENST00000343060 RPF1Q9H9Y2 349 aaKnown RBP9.79□□□□□ -0.84
HOXA1-201ENST00000343060 AGPAT4Q9NRZ5 378 aa9.79□□□□□ -0.84
HOXA1-201ENST00000343060 RIC8BQ9NVN3 520 aa9.79□□□□□ -0.84
HOXA1-201ENST00000343060 AQP12BA6NM10 295 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 ZNF839A8K0R7 811 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 ACKR2O00590 384 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 GAS2O43903 313 aaKnown RBP9.78□□□□□ -0.84
HOXA1-201ENST00000343060 DLX3O60479 287 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 AP2A1O95782 977 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 ITGB3P05106 788 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 JUNBP17275 347 aaPredicted RBP9.78□□□□□ -0.84
HOXA1-201ENST00000343060 ATP6V1B2P21281 511 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 RXRGP48443 463 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 RGS7P49802 495 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 PRAMEP78395 509 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 MPP1Q00013 466 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 LAMTOR4Q0VGL1 99 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 NFATC3Q12968 1075 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 PSMD5Q16401 504 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 TSTD2Q5T7W7 516 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 ATF7IP2Q5U623 682 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 GPR107Q5VW38 600 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 BSPRYQ5W0U4 402 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 EEF1DP3Q658K8 133 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 LRRC8EQ6NSJ5 796 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 SLC26A9Q7LBE3 791 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 KCNMB4Q86W47 210 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 DHFR2Q86XF0 187 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 AQP12AQ8IXF9 295 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 CENPLQ8N0S6 344 aaPredicted RBP9.78□□□□□ -0.84
HOXA1-201ENST00000343060 CBR4Q8N4T8 237 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 PNPT1Q8TCS8 783 aaKnown RBP9.78□□□□□ -0.84
HOXA1-201ENST00000343060 OLFM1Q99784 485 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 FZD8Q9H461 694 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 TUT1Q9H6E5 874 aaKnown RBP9.78□□□□□ -0.84
HOXA1-201ENST00000343060 RPAP3Q9H6T3 665 aaPredicted RBP9.78□□□□□ -0.84
HOXA1-201ENST00000343060 MEAF6Q9HAF1 191 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 NRBP2Q9NSY0 501 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 NSMCE4AQ9NXX6 385 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 VANGL2Q9ULK5 521 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 TCAF1Q9Y4C2 921 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 PHIPQ8WWQ0 1821 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 TRIP11Q15643 1979 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 DYNC1LI2O43237 492 aaPredicted RBP9.78□□□□□ -0.84
HOXA1-201ENST00000343060 XPOTO43592 962 aaKnown RBP9.78□□□□□ -0.84
HOXA1-201ENST00000343060 SRP72O76094 671 aaKnown RBP9.78□□□□□ -0.84
HOXA1-201ENST00000343060 SLC35E2BP0CK96 405 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 GOT1P17174 413 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 EPHX2P34913 555 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 ATP4BP51164 291 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 TMBIM6P55061 237 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 DNAJB13P59910 316 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 BNIP3Q12983 259 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 MXD4Q14582 209 aaPredicted RBP9.78□□□□□ -0.84
HOXA1-201ENST00000343060 GRM3Q14832 879 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 RGS21Q2M5E4 152 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 KCTD11Q693B1 232 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 STYK1Q6J9G0 422 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 C16orf87Q6PH81 154 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 USP51Q70EK9 711 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 PIWIL4Q7Z3Z4 852 aaKnown RBP9.78□□□□□ -0.84
HOXA1-201ENST00000343060 ZC3HC1Q86WB0 502 aaKnown RBP9.78□□□□□ -0.84
HOXA1-201ENST00000343060 PSTKQ8IV42 348 aaKnown RBP9.78□□□□□ -0.84
HOXA1-201ENST00000343060 TMEM192Q8IY95 271 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 TMEM130Q8N3G9 435 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 CCDC185Q8N715 623 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 SCAIQ8N9R8 606 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 OR52K1Q8NGK4 314 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 OR13F1Q8NGS4 319 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 SPPL2BQ8TCT7 592 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 SLC35F5Q8WV83 523 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 CANT1Q8WVQ1 401 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 FAR2Q96K12 515 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 GPR78Q96P69 363 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 C9orf16Q9BUW7 83 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 SLC25A23Q9BV35 468 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 NT5C1AQ9BXI3 368 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 MAGEB5Q9BZ81 275 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 UNKQ9C0B0 810 aaKnown RBP9.78□□□□□ -0.84
HOXA1-201ENST00000343060 MUC3BQ9H195 1237 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 RHOJQ9H4E5 214 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 POLR1BQ9H9Y6 1135 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 ACSS2Q9NR19 701 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 GID8Q9NWU2 228 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 TRNAU1APQ9NX07 287 aaKnown RBP9.78□□□□□ -0.84
HOXA1-201ENST00000343060 GIN1Q9NXP7 522 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 NCKIPSDQ9NZQ3 722 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 CROTQ9UKG9 612 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms