RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 CES3Q6UWW8 571 aa14.09□□□□□ -0.15
PMS1-201ENST00000342075 SLC25A41Q8N5S1 370 aa14.09□□□□□ -0.15
PMS1-201ENST00000342075 NSMCE1Q8WV22 266 aa14.09□□□□□ -0.15
PMS1-201ENST00000342075 EXOC4Q96A65 974 aa14.09□□□□□ -0.15
PMS1-201ENST00000342075 IMP4Q96G21 291 aaKnown RBP14.09□□□□□ -0.15
PMS1-201ENST00000342075 VAT1Q99536 393 aa14.09□□□□□ -0.15
PMS1-201ENST00000342075 C2orf49Q9BVC5 232 aaPredicted RBP14.09□□□□□ -0.15
PMS1-201ENST00000342075 PCDHGC4Q9Y5F7 938 aa14.09□□□□□ -0.15
PMS1-201ENST00000342075 KIAA1549LQ6ZVL6 1849 aa14.08□□□□□ -0.15
PMS1-201ENST00000342075 NARSO43776 548 aaKnown RBP14.08□□□□□ -0.16
PMS1-201ENST00000342075 PPFIA2O75334 1257 aa14.08□□□□□ -0.16
PMS1-201ENST00000342075 AP2A1O95782 977 aa14.08□□□□□ -0.16
PMS1-201ENST00000342075 F7P08709 466 aaPredicted RBP14.08□□□□□ -0.16
PMS1-201ENST00000342075 IL9P15248 144 aa14.08□□□□□ -0.16
PMS1-201ENST00000342075 FDFT1P37268 417 aa14.08□□□□□ -0.16
PMS1-201ENST00000342075 OPRD1P41143 372 aa14.08□□□□□ -0.16
PMS1-201ENST00000342075 CERCAMQ5T4B2 595 aa14.08□□□□□ -0.16
PMS1-201ENST00000342075 ITPRIPL1Q6GPH6 555 aa14.08□□□□□ -0.16
PMS1-201ENST00000342075 TRMT61BQ9BVS5 477 aaKnown RBP14.08□□□□□ -0.16
PMS1-201ENST00000342075 THG1LQ9NWX6 298 aaKnown RBP14.08□□□□□ -0.16
PMS1-201ENST00000342075 HOXC11O43248 304 aaPredicted RBP14.08□□□□□ -0.16
PMS1-201ENST00000342075 PIRTP0C851 137 aa14.08□□□□□ -0.16
PMS1-201ENST00000342075 SRCP12931 536 aa14.08□□□□□ -0.16
PMS1-201ENST00000342075 MGAT1P26572 445 aa14.08□□□□□ -0.16
PMS1-201ENST00000342075 ELK3P41970 407 aa14.08□□□□□ -0.16
PMS1-201ENST00000342075 SERPINH1P50454 418 aaKnown RBP14.08□□□□□ -0.16
PMS1-201ENST00000342075 PMS2P54278 862 aa14.08□□□□□ -0.16
PMS1-201ENST00000342075 MAP9Q49MG5 647 aa14.08□□□□□ -0.16
PMS1-201ENST00000342075 ACCSLQ4AC99 568 aa14.08□□□□□ -0.16
PMS1-201ENST00000342075 PCGF5Q86SE9 256 aa14.08□□□□□ -0.16
PMS1-201ENST00000342075 HOOK3Q86VS8 718 aa14.08□□□□□ -0.16
PMS1-201ENST00000342075 BBOF1Q8ND07 529 aa14.08□□□□□ -0.16
PMS1-201ENST00000342075 FBXO36Q8NEA4 188 aa14.08□□□□□ -0.16
PMS1-201ENST00000342075 HLA-CQ95604 372 aa14.08□□□□□ -0.16
PMS1-201ENST00000342075 PSKH2Q96QS6 385 aa14.08□□□□□ -0.16
PMS1-201ENST00000342075 FCRL5Q96RD9 977 aa14.08□□□□□ -0.16
PMS1-201ENST00000342075 MGME1Q9BQP7 344 aa14.08□□□□□ -0.16
PMS1-201ENST00000342075 PLAC1Q9HBJ0 212 aa14.08□□□□□ -0.16
PMS1-201ENST00000342075 NINJ2Q9NZG7 142 aa14.08□□□□□ -0.16
PMS1-201ENST00000342075 WASH3PC4AMC7 463 aa14.07□□□□□ -0.16
PMS1-201ENST00000342075 SSTR1P30872 391 aa14.07□□□□□ -0.16
PMS1-201ENST00000342075 HSPA9P38646 679 aaKnown RBP14.07□□□□□ -0.16
PMS1-201ENST00000342075 MAGEA6P43360 314 aa14.07□□□□□ -0.16
PMS1-201ENST00000342075 WNT3AP56704 352 aa14.07□□□□□ -0.16
PMS1-201ENST00000342075 RHOAP61586 193 aa14.07□□□□□ -0.16
PMS1-201ENST00000342075 SKOR1P84550 965 aa14.07□□□□□ -0.16
PMS1-201ENST00000342075 GALNT3Q14435 633 aa14.07□□□□□ -0.16
PMS1-201ENST00000342075 TXNDC11Q6PKC3 985 aa14.07□□□□□ -0.16
PMS1-201ENST00000342075 KDELC1Q6UW63 502 aa14.07□□□□□ -0.16
PMS1-201ENST00000342075 ZNF783Q6ZMS7 281 aa14.07□□□□□ -0.16
PMS1-201ENST00000342075 UNC5BQ8IZJ1 945 aa14.07□□□□□ -0.16
PMS1-201ENST00000342075 NECTIN4Q96NY8 510 aa14.07□□□□□ -0.16
PMS1-201ENST00000342075 POLR1EQ9GZS1 481 aaKnown RBP14.07□□□□□ -0.16
PMS1-201ENST00000342075 SLC25A51Q9H1U9 297 aa14.07□□□□□ -0.16
PMS1-201ENST00000342075 BRD9Q9H8M2 597 aa14.07□□□□□ -0.16
PMS1-201ENST00000342075 KCNK12Q9HB15 430 aa14.07□□□□□ -0.16
PMS1-201ENST00000342075 SYBUQ9NX95 663 aa14.07□□□□□ -0.16
PMS1-201ENST00000342075 OBP2AQ9NY56 170 aa14.07□□□□□ -0.16
PMS1-201ENST00000342075 EPS15L1Q9UBC2 864 aa14.07□□□□□ -0.16
PMS1-201ENST00000342075 SEPT3Q9UH03 358 aa14.07□□□□□ -0.16
PMS1-201ENST00000342075 TTC34A8MYJ7 566 aa14.07□□□□□ -0.16
PMS1-201ENST00000342075 PIGNO95427 931 aa14.07□□□□□ -0.16
PMS1-201ENST00000342075 TUBBP07437 444 aa14.07□□□□□ -0.16
PMS1-201ENST00000342075 PDHA1P08559 390 aa14.07□□□□□ -0.16
PMS1-201ENST00000342075 TPSB2P20231 275 aa14.07□□□□□ -0.16
PMS1-201ENST00000342075 MAGEA4P43358 317 aa14.07□□□□□ -0.16
PMS1-201ENST00000342075 TPSAB1Q15661 275 aa14.07□□□□□ -0.16
PMS1-201ENST00000342075 Q6ZVU0 165 aa14.07□□□□□ -0.16
PMS1-201ENST00000342075 PDCD6IPQ8WUM4 868 aaKnown RBP14.07□□□□□ -0.16
PMS1-201ENST00000342075 EVLQ9UI08 416 aaPredicted RBP14.07□□□□□ -0.16
PMS1-201ENST00000342075 FBXO10Q9UK96 956 aa14.07□□□□□ -0.16
PMS1-201ENST00000342075 ANHXE9PGG2 379 aa14.07□□□□□ -0.16
PMS1-201ENST00000342075 ARL4CP56559 192 aa14.07□□□□□ -0.16
PMS1-201ENST00000342075 SMAD4Q13485 552 aaKnown RBP14.07□□□□□ -0.16
PMS1-201ENST00000342075 SLC29A2Q14542 456 aa14.07□□□□□ -0.16
PMS1-201ENST00000342075 PTPRNQ16849 979 aa14.07□□□□□ -0.16
PMS1-201ENST00000342075 EMC10Q5UCC4 262 aa14.07□□□□□ -0.16
PMS1-201ENST00000342075 DENND5AQ6IQ26 1287 aa14.07□□□□□ -0.16
PMS1-201ENST00000342075 DNAAF3Q8N9W5 541 aa14.07□□□□□ -0.16
PMS1-201ENST00000342075 VOPP1Q96AW1 172 aa14.07□□□□□ -0.16
PMS1-201ENST00000342075 CFAP36Q96G28 342 aa14.07□□□□□ -0.16
PMS1-201ENST00000342075 MYO19Q96H55 970 aa14.07□□□□□ -0.16
PMS1-201ENST00000342075 ZNF778Q96MU6 729 aa14.07□□□□□ -0.16
PMS1-201ENST00000342075 FSD1LQ9BXM9 530 aa14.07□□□□□ -0.16
PMS1-201ENST00000342075 RETREG1Q9H6L5 497 aa14.07□□□□□ -0.16
PMS1-201ENST00000342075 CHKBQ9Y259 395 aa14.07□□□□□ -0.16
PMS1-201ENST00000342075 MAD1L1Q9Y6D9 718 aa14.07□□□□□ -0.16
PMS1-201ENST00000342075 ATP9BO43861 1147 aa14.06□□□□□ -0.16
PMS1-201ENST00000342075 ECI2O75521 394 aa14.06□□□□□ -0.16
PMS1-201ENST00000342075 HLA-EP13747 358 aa14.06□□□□□ -0.16
PMS1-201ENST00000342075 CR2P20023 1033 aa14.06□□□□□ -0.16
PMS1-201ENST00000342075 GPX6P59796 221 aa14.06□□□□□ -0.16
PMS1-201ENST00000342075 ECT2LQ008S8 904 aa14.06□□□□□ -0.16
PMS1-201ENST00000342075 SEMG2Q02383 582 aa14.06□□□□□ -0.16
PMS1-201ENST00000342075 CAV1Q03135 178 aa14.06□□□□□ -0.16
PMS1-201ENST00000342075 EFTUD2Q15029 972 aaKnown RBP eCLIP14.06□□□□□ -0.16
PMS1-201ENST00000342075 PDGFRLQ15198 375 aa14.06□□□□□ -0.16
PMS1-201ENST00000342075 EIF1ADQ8N9N8 165 aaKnown RBP14.06□□□□□ -0.16
PMS1-201ENST00000342075 MRGPRX3Q96LB0 322 aa14.06□□□□□ -0.16
PMS1-201ENST00000342075 ZNF599Q96NL3 588 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms