RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 ATMINO43313 823 aaPredicted RBP20.49■□□□□ 0.87
SYNE2-201ENST00000341472 ADRB3P13945 408 aa20.49■□□□□ 0.87
SYNE2-201ENST00000341472 GKP32189 559 aa20.49■□□□□ 0.87
SYNE2-201ENST00000341472 HTR7P34969 479 aa20.49■□□□□ 0.87
SYNE2-201ENST00000341472 RPS21P63220 83 aaKnown RBP20.49■□□□□ 0.87
SYNE2-201ENST00000341472 INO80DQ53TQ3 878 aaPredicted RBP20.49■□□□□ 0.87
SYNE2-201ENST00000341472 ZNF805Q5CZA5 627 aa20.49■□□□□ 0.87
SYNE2-201ENST00000341472 ERMARDQ5T6L9 678 aa20.49■□□□□ 0.87
SYNE2-201ENST00000341472 KDF1Q8NAX2 398 aaPredicted RBP20.49■□□□□ 0.87
SYNE2-201ENST00000341472 TMEM145Q8NBT3 493 aa20.49■□□□□ 0.87
SYNE2-201ENST00000341472 OR6K2Q8NGY2 324 aa20.49■□□□□ 0.87
SYNE2-201ENST00000341472 HMCESQ96FZ2 354 aa20.49■□□□□ 0.87
SYNE2-201ENST00000341472 TMEM121BQ9BXQ6 578 aaPredicted RBP20.49■□□□□ 0.87
SYNE2-201ENST00000341472 DHX35Q9H5Z1 703 aaKnown RBP20.49■□□□□ 0.87
SYNE2-201ENST00000341472 GPATCH2LQ9NWQ4 482 aa20.49■□□□□ 0.87
SYNE2-201ENST00000341472 ZFR2Q9UPR6 939 aaKnown RBP20.49■□□□□ 0.87
SYNE2-201ENST00000341472 FADS3Q9Y5Q0 445 aa20.49■□□□□ 0.87
SYNE2-201ENST00000341472 BZW2Q9Y6E2 419 aaKnown RBP20.49■□□□□ 0.87
SYNE2-201ENST00000341472 C16orf96A6NNT2 1141 aa20.48■□□□□ 0.87
SYNE2-201ENST00000341472 EIF3CLB5ME19 914 aaKnown RBP20.48■□□□□ 0.87
SYNE2-201ENST00000341472 AP1G1O43747 822 aa20.48■□□□□ 0.87
SYNE2-201ENST00000341472 MYBL1P10243 752 aa20.48■□□□□ 0.87
SYNE2-201ENST00000341472 HNRNPA2B1P22626 353 aaKnown RBP20.48■□□□□ 0.87
SYNE2-201ENST00000341472 TPI1P60174 286 aa20.48■□□□□ 0.87
SYNE2-201ENST00000341472 RAD51Q06609 339 aa20.48■□□□□ 0.87
SYNE2-201ENST00000341472 BNIP3Q12983 259 aa20.48■□□□□ 0.87
SYNE2-201ENST00000341472 SERINC3Q13530 473 aa20.48■□□□□ 0.87
SYNE2-201ENST00000341472 SEL1L3Q68CR1 1132 aa20.48■□□□□ 0.87
SYNE2-201ENST00000341472 ARFGAP1Q8N6T3 406 aa20.48■□□□□ 0.87
SYNE2-201ENST00000341472 FNIP1Q8TF40 1166 aa20.48■□□□□ 0.87
SYNE2-201ENST00000341472 RAB7BQ96AH8 199 aa20.48■□□□□ 0.87
SYNE2-201ENST00000341472 ZNF653Q96CK0 615 aa20.48■□□□□ 0.87
SYNE2-201ENST00000341472 TRIM11Q96F44 468 aa20.48■□□□□ 0.87
SYNE2-201ENST00000341472 EIF3CQ99613 913 aaKnown RBP20.48■□□□□ 0.87
SYNE2-201ENST00000341472 MYOCQ99972 504 aa20.48■□□□□ 0.87
SYNE2-201ENST00000341472 NCAPGQ9BPX3 1015 aa20.48■□□□□ 0.87
SYNE2-201ENST00000341472 OSBPL1AQ9BXW6 950 aa20.48■□□□□ 0.87
SYNE2-201ENST00000341472 SLC17A9Q9BYT1 436 aa20.48■□□□□ 0.87
SYNE2-201ENST00000341472 KLC2Q9H0B6 622 aa20.48■□□□□ 0.87
SYNE2-201ENST00000341472 MRPL47Q9HD33 250 aaKnown RBP20.48■□□□□ 0.87
SYNE2-201ENST00000341472 TOR4AQ9NXH8 423 aa20.48■□□□□ 0.87
SYNE2-201ENST00000341472 FTSJ1Q9UET6 329 aa20.48■□□□□ 0.87
SYNE2-201ENST00000341472 A0A1W2PQJ5 194 aa20.47■□□□□ 0.87
SYNE2-201ENST00000341472 TMEM8BA6NDV4 472 aa20.47■□□□□ 0.87
SYNE2-201ENST00000341472 DAPK3O43293 454 aa20.47■□□□□ 0.87
SYNE2-201ENST00000341472 PRPSAP2O60256 369 aa20.47■□□□□ 0.87
SYNE2-201ENST00000341472 TMCC1O94876 653 aa20.47■□□□□ 0.87
SYNE2-201ENST00000341472 LDOC1O95751 146 aaPredicted RBP20.47■□□□□ 0.87
SYNE2-201ENST00000341472 PAK4O96013 591 aaPredicted RBP20.47■□□□□ 0.87
SYNE2-201ENST00000341472 THEGLP0DJG4 465 aa20.47■□□□□ 0.87
SYNE2-201ENST00000341472 EPHA8P29322 1005 aaPredicted RBP20.47■□□□□ 0.87
SYNE2-201ENST00000341472 MIPP30301 263 aa20.47■□□□□ 0.87
SYNE2-201ENST00000341472 MAPK8IP2Q13387 824 aaPredicted RBP20.47■□□□□ 0.87
SYNE2-201ENST00000341472 TMEM259Q4ZIN3 620 aa20.47■□□□□ 0.87
SYNE2-201ENST00000341472 ATXN7L2Q5T6C5 722 aaPredicted RBP20.47■□□□□ 0.87
SYNE2-201ENST00000341472 KIAA1161Q6NSJ0 714 aa20.47■□□□□ 0.87
SYNE2-201ENST00000341472 GDPD4Q6W3E5 623 aa20.47■□□□□ 0.87
SYNE2-201ENST00000341472 PARS2Q7L3T8 475 aaKnown RBP20.47■□□□□ 0.87
SYNE2-201ENST00000341472 EID2Q8N6I1 236 aa20.47■□□□□ 0.87
SYNE2-201ENST00000341472 CPLX3Q8WVH0 158 aa20.47■□□□□ 0.87
SYNE2-201ENST00000341472 SYN2Q92777 582 aaPredicted RBP20.47■□□□□ 0.87
SYNE2-201ENST00000341472 GDAP1L1Q96MZ0 367 aa20.47■□□□□ 0.87
SYNE2-201ENST00000341472 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.47■□□□□ 0.87
SYNE2-201ENST00000341472 TRIM7Q9C029 511 aa20.47■□□□□ 0.87
SYNE2-201ENST00000341472 ISCUQ9H1K1 167 aa20.47■□□□□ 0.87
SYNE2-201ENST00000341472 KLHL11Q9NVR0 708 aa20.47■□□□□ 0.87
SYNE2-201ENST00000341472 MYO1AQ9UBC5 1043 aa20.47■□□□□ 0.87
SYNE2-201ENST00000341472 AP4E1Q9UPM8 1137 aa20.47■□□□□ 0.87
SYNE2-201ENST00000341472 HS3ST3A1Q9Y663 406 aa20.47■□□□□ 0.87
SYNE2-201ENST00000341472 SCINQ9Y6U3 715 aa20.47■□□□□ 0.87
SYNE2-201ENST00000341472 EEF2KO00418 725 aaKnown RBP20.46■□□□□ 0.87
SYNE2-201ENST00000341472 NEMP1O14524 444 aa20.46■□□□□ 0.87
SYNE2-201ENST00000341472 TSPAN6O43657 245 aa20.46■□□□□ 0.87
SYNE2-201ENST00000341472 KRT37O76014 449 aa20.46■□□□□ 0.87
SYNE2-201ENST00000341472 DKK1O94907 266 aa20.46■□□□□ 0.87
SYNE2-201ENST00000341472 UGT2B4P06133 528 aa20.46■□□□□ 0.87
SYNE2-201ENST00000341472 PBX1P40424 430 aa20.46■□□□□ 0.87
SYNE2-201ENST00000341472 NDST2P52849 883 aa20.46■□□□□ 0.87
SYNE2-201ENST00000341472 RHOAP61586 193 aa20.46■□□□□ 0.87
SYNE2-201ENST00000341472 SGCGQ13326 291 aa20.46■□□□□ 0.87
SYNE2-201ENST00000341472 CYTH1Q15438 398 aa20.46■□□□□ 0.87
SYNE2-201ENST00000341472 CA9Q16790 459 aa20.46■□□□□ 0.87
SYNE2-201ENST00000341472 CCDC157Q569K6 752 aa20.46■□□□□ 0.87
SYNE2-201ENST00000341472 CCNI2Q6ZMN8 369 aaPredicted RBP20.46■□□□□ 0.87
SYNE2-201ENST00000341472 TTC7BQ86TV6 843 aa20.46■□□□□ 0.87
SYNE2-201ENST00000341472 VPS36Q86VN1 386 aa20.46■□□□□ 0.87
SYNE2-201ENST00000341472 ZSCAN30Q86W11 494 aa20.46■□□□□ 0.87
SYNE2-201ENST00000341472 KLHL32Q96NJ5 620 aa20.46■□□□□ 0.87
SYNE2-201ENST00000341472 FZD3Q9NPG1 666 aa20.46■□□□□ 0.87
SYNE2-201ENST00000341472 IGF2RP11717 2491 aa20.46■□□□□ 0.87
SYNE2-201ENST00000341472 IGSF6O95976 241 aa20.45■□□□□ 0.86
SYNE2-201ENST00000341472 CLDN2P57739 230 aa20.45■□□□□ 0.86
SYNE2-201ENST00000341472 ZBED6P86452 979 aa20.45■□□□□ 0.86
SYNE2-201ENST00000341472 TDRD12Q587J7 1177 aaKnown RBP20.45■□□□□ 0.86
SYNE2-201ENST00000341472 TMPRSS7Q7RTY8 843 aa20.45■□□□□ 0.86
SYNE2-201ENST00000341472 PSTKQ8IV42 348 aaKnown RBP20.45■□□□□ 0.86
SYNE2-201ENST00000341472 NETO2Q8NC67 525 aa20.45■□□□□ 0.86
SYNE2-201ENST00000341472 FAM174AQ8TBP5 190 aa20.45■□□□□ 0.86
SYNE2-201ENST00000341472 IQCDQ96DY2 449 aa20.45■□□□□ 0.86
SYNE2-201ENST00000341472 CNDP2Q96KP4 475 aaKnown RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms