RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 ZNF846Q147U1 533 aa12.01□□□□□ -0.49
RTN3-203ENST00000341307 MAPRE1Q15691 268 aaKnown RBP12.01□□□□□ -0.49
RTN3-203ENST00000341307 STK11Q15831 433 aa12.01□□□□□ -0.49
RTN3-203ENST00000341307 ATG16L1Q676U5 607 aa12.01□□□□□ -0.49
RTN3-203ENST00000341307 TUBA3EQ6PEY2 450 aa12.01□□□□□ -0.49
RTN3-203ENST00000341307 PLEKHG7Q6ZR37 379 aa12.01□□□□□ -0.49
RTN3-203ENST00000341307 THNSL1Q8IYQ7 743 aa12.01□□□□□ -0.49
RTN3-203ENST00000341307 ASCC1Q8N9N2 400 aaKnown RBP12.01□□□□□ -0.49
RTN3-203ENST00000341307 AFG1LQ8WV93 481 aa12.01□□□□□ -0.49
RTN3-203ENST00000341307 KLHL32Q96NJ5 620 aa12.01□□□□□ -0.49
RTN3-203ENST00000341307 MRPL9Q9BYD2 267 aaKnown RBP12.01□□□□□ -0.49
RTN3-203ENST00000341307 PLEKHA5Q9HAU0 1116 aa12.01□□□□□ -0.49
RTN3-203ENST00000341307 SNNO75324 88 aaPredicted RBP12.01□□□□□ -0.49
RTN3-203ENST00000341307 ZSCAN5DPP0CG00 497 aa12.01□□□□□ -0.49
RTN3-203ENST00000341307 INSRRP14616 1297 aa12.01□□□□□ -0.49
RTN3-203ENST00000341307 MAP4P27816 1152 aaKnown RBP12.01□□□□□ -0.49
RTN3-203ENST00000341307 TTKP33981 857 aa12.01□□□□□ -0.49
RTN3-203ENST00000341307 GCNT1Q02742 428 aa12.01□□□□□ -0.49
RTN3-203ENST00000341307 CENPCQ03188 943 aa12.01□□□□□ -0.49
RTN3-203ENST00000341307 GRSF1Q12849 480 aaKnown RBP eCLIP12.01□□□□□ -0.49
RTN3-203ENST00000341307 KLF1Q13351 362 aaPredicted RBP12.01□□□□□ -0.49
RTN3-203ENST00000341307 CHI3L2Q15782 390 aa12.01□□□□□ -0.49
RTN3-203ENST00000341307 WDR44Q5JSH3 913 aa12.01□□□□□ -0.49
RTN3-203ENST00000341307 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.01□□□□□ -0.49
RTN3-203ENST00000341307 C17orf99Q6UX52 265 aa12.01□□□□□ -0.49
RTN3-203ENST00000341307 LYPD8Q6UX82 237 aa12.01□□□□□ -0.49
RTN3-203ENST00000341307 UTS2BQ765I0 119 aa12.01□□□□□ -0.49
RTN3-203ENST00000341307 CRLF3Q8IUI8 442 aa12.01□□□□□ -0.49
RTN3-203ENST00000341307 SPARTQ8N0X7 666 aa12.01□□□□□ -0.49
RTN3-203ENST00000341307 LINC00469Q8N7U9 141 aa12.01□□□□□ -0.49
RTN3-203ENST00000341307 SHCBP1Q8NEM2 672 aa12.01□□□□□ -0.49
RTN3-203ENST00000341307 ABHD11Q8NFV4 315 aa12.01□□□□□ -0.49
RTN3-203ENST00000341307 ZNF778Q96MU6 729 aa12.01□□□□□ -0.49
RTN3-203ENST00000341307 ACO2Q99798 780 aaKnown RBP12.01□□□□□ -0.49
RTN3-203ENST00000341307 MRPL4Q9BYD3 311 aaKnown RBP12.01□□□□□ -0.49
RTN3-203ENST00000341307 MTMR12Q9C0I1 747 aa12.01□□□□□ -0.49
RTN3-203ENST00000341307 STN1Q9H668 368 aaKnown RBP12.01□□□□□ -0.49
RTN3-203ENST00000341307 TMEM9Q9P0T7 183 aa12.01□□□□□ -0.49
RTN3-203ENST00000341307 GMIPQ9P107 970 aa12.01□□□□□ -0.49
RTN3-203ENST00000341307 NXF1Q9UBU9 619 aaKnown RBP12.01□□□□□ -0.49
RTN3-203ENST00000341307 PTBP2Q9UKA9 531 aaKnown RBP12.01□□□□□ -0.49
RTN3-203ENST00000341307 ZSWIM8A7E2V4 1837 aa12□□□□□ -0.49
RTN3-203ENST00000341307 hCG_2039718K7EN88 272 aa12□□□□□ -0.49
RTN3-203ENST00000341307 POLR1CO15160 346 aaPredicted RBP12□□□□□ -0.49
RTN3-203ENST00000341307 TOM1L1O75674 476 aa12□□□□□ -0.49
RTN3-203ENST00000341307 SNAI1O95863 264 aaPredicted RBP12□□□□□ -0.49
RTN3-203ENST00000341307 LGALS2P05162 132 aa12□□□□□ -0.49
RTN3-203ENST00000341307 COL6A1P12109 1028 aa12□□□□□ -0.49
RTN3-203ENST00000341307 STX1BP61266 288 aa12□□□□□ -0.49
RTN3-203ENST00000341307 CCNA1P78396 465 aa12□□□□□ -0.49
RTN3-203ENST00000341307 MS4A2Q01362 244 aa12□□□□□ -0.49
RTN3-203ENST00000341307 CLCQ05315 142 aa12□□□□□ -0.49
RTN3-203ENST00000341307 INSCQ1MX18 579 aa12□□□□□ -0.49
RTN3-203ENST00000341307 EEF1DP3Q658K8 133 aa12□□□□□ -0.49
RTN3-203ENST00000341307 TMEM192Q8IY95 271 aa12□□□□□ -0.49
RTN3-203ENST00000341307 TTC30BQ8N4P2 665 aa12□□□□□ -0.49
RTN3-203ENST00000341307 CD99L2Q8TCZ2 262 aa12□□□□□ -0.49
RTN3-203ENST00000341307 CPA5Q8WXQ8 436 aa12□□□□□ -0.49
RTN3-203ENST00000341307 PMEPA1Q969W9 287 aa12□□□□□ -0.49
RTN3-203ENST00000341307 VTI1AQ96AJ9 217 aa12□□□□□ -0.49
RTN3-203ENST00000341307 IL12RB2Q99665 862 aa12□□□□□ -0.49
RTN3-203ENST00000341307 CGRRF1Q99675 332 aa12□□□□□ -0.49
RTN3-203ENST00000341307 HEMGNQ9BXL5 484 aa12□□□□□ -0.49
RTN3-203ENST00000341307 ACSS3Q9H6R3 686 aa12□□□□□ -0.49
RTN3-203ENST00000341307 IFT122Q9HBG6 1241 aa12□□□□□ -0.49
RTN3-203ENST00000341307 AKIP1Q9NQ31 210 aa12□□□□□ -0.49
RTN3-203ENST00000341307 STAU2Q9NUL3 570 aaKnown RBP eCLIP12□□□□□ -0.49
RTN3-203ENST00000341307 SIRPGQ9P1W8 387 aa12□□□□□ -0.49
RTN3-203ENST00000341307 UGT2A1Q9Y4X1 527 aa12□□□□□ -0.49
RTN3-203ENST00000341307 TANC1Q9C0D5 1861 aa12□□□□□ -0.49
RTN3-203ENST00000341307 PLXNB2O15031 1838 aa12□□□□□ -0.49
RTN3-203ENST00000341307 LINC00854A0A1B0GVQ3 168 aa12□□□□□ -0.49
RTN3-203ENST00000341307 ERVH48-1M5A8F1 160 aa12□□□□□ -0.49
RTN3-203ENST00000341307 CYB561D2O14569 222 aa12□□□□□ -0.49
RTN3-203ENST00000341307 ETS1P14921 441 aa12□□□□□ -0.49
RTN3-203ENST00000341307 PRKACAP17612 351 aa12□□□□□ -0.49
RTN3-203ENST00000341307 MATN1P21941 496 aa12□□□□□ -0.49
RTN3-203ENST00000341307 FAAP100Q0VG06 881 aa12□□□□□ -0.49
RTN3-203ENST00000341307 MXD4Q14582 209 aaPredicted RBP12□□□□□ -0.49
RTN3-203ENST00000341307 KLHL38Q2WGJ6 581 aa12□□□□□ -0.49
RTN3-203ENST00000341307 SNAP47Q5SQN1 464 aa12□□□□□ -0.49
RTN3-203ENST00000341307 TMEM270Q6UE05 265 aa12□□□□□ -0.49
RTN3-203ENST00000341307 GPR142Q7Z601 462 aa12□□□□□ -0.49
RTN3-203ENST00000341307 DPP9Q86TI2 863 aa12□□□□□ -0.49
RTN3-203ENST00000341307 CCDC28AQ8IWP9 274 aa12□□□□□ -0.49
RTN3-203ENST00000341307 ZBTB8OSQ8IWT0 167 aa12□□□□□ -0.49
RTN3-203ENST00000341307 ZNF786Q8N393 782 aa12□□□□□ -0.49
RTN3-203ENST00000341307 PDPRQ8NCN5 879 aa12□□□□□ -0.49
RTN3-203ENST00000341307 BHLHE22Q8NFJ8 381 aaPredicted RBP12□□□□□ -0.49
RTN3-203ENST00000341307 PARK7Q99497 189 aaKnown RBP12□□□□□ -0.49
RTN3-203ENST00000341307 WDR83Q9BRX9 315 aaKnown RBP12□□□□□ -0.49
RTN3-203ENST00000341307 SEMA6AQ9H2E6 1030 aa12□□□□□ -0.49
RTN3-203ENST00000341307 ATP13A3Q9H7F0 1226 aa12□□□□□ -0.49
RTN3-203ENST00000341307 POLR1BQ9H9Y6 1135 aa12□□□□□ -0.49
RTN3-203ENST00000341307 POLE4Q9NR33 117 aa12□□□□□ -0.49
RTN3-203ENST00000341307 DUS2Q9NX74 493 aaKnown RBP12□□□□□ -0.49
RTN3-203ENST00000341307 ERAP1Q9NZ08 941 aa12□□□□□ -0.49
RTN3-203ENST00000341307 PLXNA1Q9UIW2 1896 aa12□□□□□ -0.49
RTN3-203ENST00000341307 THSD7BQ9C0I4 1608 aa12□□□□□ -0.49
RTN3-203ENST00000341307 H3BUI4 141 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms