RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 PXMP2Q9NR77 195 aa17.16■□□□□ 0.34
CDK11B-201ENST00000340677 AGPAT5Q9NUQ2 364 aa17.16■□□□□ 0.34
CDK11B-201ENST00000340677 ADPRHL2Q9NX46 363 aa17.16■□□□□ 0.34
CDK11B-201ENST00000340677 PTBP2Q9UKA9 531 aaKnown RBP17.16■□□□□ 0.34
CDK11B-201ENST00000340677 KIAA1217Q5T5P2 1943 aa17.16■□□□□ 0.34
CDK11B-201ENST00000340677 GAS2O43903 313 aaKnown RBP17.15■□□□□ 0.34
CDK11B-201ENST00000340677 ATE1O95260 518 aa17.15■□□□□ 0.34
CDK11B-201ENST00000340677 TNNC1P63316 161 aa17.15■□□□□ 0.34
CDK11B-201ENST00000340677 TMEM95Q3KNT9 176 aa17.15■□□□□ 0.34
CDK11B-201ENST00000340677 HMBOX1Q6NT76 420 aa17.15■□□□□ 0.34
CDK11B-201ENST00000340677 OTOP1Q7RTM1 612 aa17.15■□□□□ 0.34
CDK11B-201ENST00000340677 RIOX2Q8IUF8 465 aa17.15■□□□□ 0.34
CDK11B-201ENST00000340677 OR52N1Q8NH53 320 aa17.15■□□□□ 0.34
CDK11B-201ENST00000340677 FNIP1Q8TF40 1166 aa17.15■□□□□ 0.34
CDK11B-201ENST00000340677 GDPD5Q8WTR4 605 aa17.15■□□□□ 0.34
CDK11B-201ENST00000340677 ASZ1Q8WWH4 475 aa17.15■□□□□ 0.34
CDK11B-201ENST00000340677 TEKT5Q96M29 485 aa17.15■□□□□ 0.34
CDK11B-201ENST00000340677 DHX33Q9H6R0 707 aaKnown RBP17.15■□□□□ 0.34
CDK11B-201ENST00000340677 EIF3LQ9Y262 564 aaKnown RBP17.15■□□□□ 0.34
CDK11B-201ENST00000340677 CBY1Q9Y3M2 126 aa17.15■□□□□ 0.34
CDK11B-201ENST00000340677 TMEM120BA0PK00 339 aa17.15■□□□□ 0.34
CDK11B-201ENST00000340677 RGS20O76081 388 aa17.15■□□□□ 0.34
CDK11B-201ENST00000340677 ITIH2P19823 946 aa17.15■□□□□ 0.34
CDK11B-201ENST00000340677 GK3PQ14409 553 aa17.15■□□□□ 0.34
CDK11B-201ENST00000340677 PGM5Q15124 567 aa17.15■□□□□ 0.34
CDK11B-201ENST00000340677 TREML2Q5T2D2 321 aa17.15■□□□□ 0.34
CDK11B-201ENST00000340677 OR52K2Q8NGK3 314 aa17.15■□□□□ 0.34
CDK11B-201ENST00000340677 TPCN2Q8NHX9 752 aa17.15■□□□□ 0.34
CDK11B-201ENST00000340677 CYP2W1Q8TAV3 490 aa17.15■□□□□ 0.34
CDK11B-201ENST00000340677 ZNF398Q8TD17 642 aa17.15■□□□□ 0.34
CDK11B-201ENST00000340677 FAM161BQ96MY7 647 aa17.15■□□□□ 0.34
CDK11B-201ENST00000340677 PDCD2LQ9BRP1 358 aa17.15■□□□□ 0.34
CDK11B-201ENST00000340677 DNAJC17Q9NVM6 304 aaKnown RBP17.15■□□□□ 0.34
CDK11B-201ENST00000340677 AGO1Q9UL18 857 aaKnown RBP17.15■□□□□ 0.34
CDK11B-201ENST00000340677 SNX13Q9Y5W8 968 aa17.15■□□□□ 0.34
CDK11B-201ENST00000340677 PIAS3Q9Y6X2 628 aa17.15■□□□□ 0.34
CDK11B-201ENST00000340677 CLUHO75153 1309 aa17.15■□□□□ 0.34
CDK11B-201ENST00000340677 A0A1B0GTQ1 180 aa17.14■□□□□ 0.33
CDK11B-201ENST00000340677 DNAJA2O60884 412 aa17.14■□□□□ 0.33
CDK11B-201ENST00000340677 TCEA3O75764 348 aa17.14■□□□□ 0.33
CDK11B-201ENST00000340677 ZWINTO95229 277 aa17.14■□□□□ 0.33
CDK11B-201ENST00000340677 DLATP10515 647 aaKnown RBP17.14■□□□□ 0.33
CDK11B-201ENST00000340677 EDN3P14138 238 aa17.14■□□□□ 0.33
CDK11B-201ENST00000340677 CYLC1P35663 651 aaPredicted RBP17.14■□□□□ 0.33
CDK11B-201ENST00000340677 HPCAL1P37235 193 aa17.14■□□□□ 0.33
CDK11B-201ENST00000340677 GP5P40197 560 aa17.14■□□□□ 0.33
CDK11B-201ENST00000340677 BEX3Q00994 111 aa17.14■□□□□ 0.33
CDK11B-201ENST00000340677 PCDH1Q08174 1060 aa17.14■□□□□ 0.33
CDK11B-201ENST00000340677 PPP1R3AQ16821 1122 aa17.14■□□□□ 0.33
CDK11B-201ENST00000340677 EFHC1Q5JVL4 640 aa17.14■□□□□ 0.33
CDK11B-201ENST00000340677 KRT74Q7RTS7 529 aa17.14■□□□□ 0.33
CDK11B-201ENST00000340677 ZNF566Q969W8 418 aa17.14■□□□□ 0.33
CDK11B-201ENST00000340677 PANX3Q96QZ0 392 aa17.14■□□□□ 0.33
CDK11B-201ENST00000340677 TAAR1Q96RJ0 339 aa17.14■□□□□ 0.33
CDK11B-201ENST00000340677 GPAMQ9HCL2 828 aa17.14■□□□□ 0.33
CDK11B-201ENST00000340677 ACOT9Q9Y305 439 aa17.14■□□□□ 0.33
CDK11B-201ENST00000340677 WDR81Q562E7 1941 aa17.14■□□□□ 0.33
CDK11B-201ENST00000340677 A0A1B0GTW7 788 aa17.14■□□□□ 0.33
CDK11B-201ENST00000340677 DBX1A6NMT0 343 aa17.14■□□□□ 0.33
CDK11B-201ENST00000340677 CCNDBP1O95273 360 aa17.14■□□□□ 0.33
CDK11B-201ENST00000340677 STAU1O95793 577 aaKnown RBP17.14■□□□□ 0.33
CDK11B-201ENST00000340677 NCF2P19878 526 aaPredicted RBP17.14■□□□□ 0.33
CDK11B-201ENST00000340677 EIF4A3P38919 411 aaKnown RBP17.14■□□□□ 0.33
CDK11B-201ENST00000340677 LRRC63Q05C16 580 aa17.14■□□□□ 0.33
CDK11B-201ENST00000340677 DNASE1L3Q13609 305 aa17.14■□□□□ 0.33
CDK11B-201ENST00000340677 GRM7Q14831 915 aa17.14■□□□□ 0.33
CDK11B-201ENST00000340677 RNF111Q6ZNA4 994 aa17.14■□□□□ 0.33
CDK11B-201ENST00000340677 GADL1Q6ZQY3 521 aa17.14■□□□□ 0.33
CDK11B-201ENST00000340677 C12orf56Q8IXR9 622 aa17.14■□□□□ 0.33
CDK11B-201ENST00000340677 IL17RDQ8NFM7 739 aa17.14■□□□□ 0.33
CDK11B-201ENST00000340677 TESCQ96BS2 214 aa17.14■□□□□ 0.33
CDK11B-201ENST00000340677 PTCD3Q96EY7 689 aaKnown RBP17.14■□□□□ 0.33
CDK11B-201ENST00000340677 C11orf24Q96F05 449 aaPredicted RBP17.14■□□□□ 0.33
CDK11B-201ENST00000340677 RMDN3Q96TC7 470 aa17.14■□□□□ 0.33
CDK11B-201ENST00000340677 CNPY3Q9BT09 278 aa17.14■□□□□ 0.33
CDK11B-201ENST00000340677 TEKT3Q9BXF9 490 aa17.14■□□□□ 0.33
CDK11B-201ENST00000340677 TXLNGYQ9BZA5 131 aa17.14■□□□□ 0.33
CDK11B-201ENST00000340677 HOMER2Q9NSB8 354 aa17.14■□□□□ 0.33
CDK11B-201ENST00000340677 AFF4Q9UHB7 1163 aaKnown RBP17.14■□□□□ 0.33
CDK11B-201ENST00000340677 PFASO15067 1338 aa17.14■□□□□ 0.33
CDK11B-201ENST00000340677 CCNKO75909 580 aa17.13■□□□□ 0.33
CDK11B-201ENST00000340677 MFN2O95140 757 aa17.13■□□□□ 0.33
CDK11B-201ENST00000340677 RNF224P0DH78 156 aa17.13■□□□□ 0.33
CDK11B-201ENST00000340677 GAP43P17677 238 aa17.13■□□□□ 0.33
CDK11B-201ENST00000340677 CLCNKBP51801 687 aa17.13■□□□□ 0.33
CDK11B-201ENST00000340677 GRSF1Q12849 480 aaKnown RBP eCLIP17.13■□□□□ 0.33
CDK11B-201ENST00000340677 BAATQ14032 418 aaPredicted RBP17.13■□□□□ 0.33
CDK11B-201ENST00000340677 UGT3A1Q6NUS8 523 aa17.13■□□□□ 0.33
CDK11B-201ENST00000340677 FOXR2Q6PJQ5 311 aa17.13■□□□□ 0.33
CDK11B-201ENST00000340677 SUSD1Q6UWL2 747 aa17.13■□□□□ 0.33
CDK11B-201ENST00000340677 ZBTB46Q86UZ6 589 aa17.13■□□□□ 0.33
CDK11B-201ENST00000340677 ANKRD42Q8N9B4 389 aa17.13■□□□□ 0.33
CDK11B-201ENST00000340677 DNAJC7Q99615 494 aa17.13■□□□□ 0.33
CDK11B-201ENST00000340677 ZNF577Q9BSK1 485 aa17.13■□□□□ 0.33
CDK11B-201ENST00000340677 SLA2Q9H6Q3 261 aa17.13■□□□□ 0.33
CDK11B-201ENST00000340677 ENAMQ9NRM1 1142 aa17.13■□□□□ 0.33
CDK11B-201ENST00000340677 VPS45Q9NRW7 570 aa17.13■□□□□ 0.33
CDK11B-201ENST00000340677 PARVAQ9NVD7 372 aa17.13■□□□□ 0.33
CDK11B-201ENST00000340677 VTI1BQ9UEU0 232 aa17.13■□□□□ 0.33
CDK11B-201ENST00000340677 MYMKA6NI61 221 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms