RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 GRM3Q14832 879 aa19.49■□□□□ 0.71
SYNE4-202ENST00000340477 TEAD4Q15561 434 aa19.49■□□□□ 0.71
SYNE4-202ENST00000340477 MYLK3Q32MK0 819 aa19.49■□□□□ 0.71
SYNE4-202ENST00000340477 TMCO4Q5TGY1 634 aa19.49■□□□□ 0.71
SYNE4-202ENST00000340477 LRRC38Q5VT99 294 aa19.49■□□□□ 0.71
SYNE4-202ENST00000340477 AGBL4Q5VU57 503 aa19.49■□□□□ 0.71
SYNE4-202ENST00000340477 FBXL19Q6PCT2 694 aa19.49■□□□□ 0.71
SYNE4-202ENST00000340477 ERN2Q76MJ5 926 aaKnown RBP19.49■□□□□ 0.71
SYNE4-202ENST00000340477 CPNE8Q86YQ8 564 aa19.49■□□□□ 0.71
SYNE4-202ENST00000340477 ARHGAP12Q8IWW6 846 aa19.49■□□□□ 0.71
SYNE4-202ENST00000340477 OR6K2Q8NGY2 324 aa19.49■□□□□ 0.71
SYNE4-202ENST00000340477 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.49■□□□□ 0.71
SYNE4-202ENST00000340477 BIRC7Q96CA5 298 aa19.49■□□□□ 0.71
SYNE4-202ENST00000340477 ZNF830Q96NB3 372 aaPredicted RBP19.49■□□□□ 0.71
SYNE4-202ENST00000340477 ZNF599Q96NL3 588 aa19.49■□□□□ 0.71
SYNE4-202ENST00000340477 HDAC8Q9BY41 377 aa19.49■□□□□ 0.71
SYNE4-202ENST00000340477 PDFQ9HBH1 243 aa19.49■□□□□ 0.71
SYNE4-202ENST00000340477 PREBQ9HCU5 417 aa19.49■□□□□ 0.71
SYNE4-202ENST00000340477 DDX56Q9NY93 547 aaKnown RBP19.49■□□□□ 0.71
SYNE4-202ENST00000340477 LNP1A1A4G5 178 aa19.48■□□□□ 0.71
SYNE4-202ENST00000340477 PLK4O00444 970 aa19.48■□□□□ 0.71
SYNE4-202ENST00000340477 CD48P09326 243 aa19.48■□□□□ 0.71
SYNE4-202ENST00000340477 TNNT1P13805 278 aa19.48■□□□□ 0.71
SYNE4-202ENST00000340477 NUDT1P36639 197 aa19.48■□□□□ 0.71
SYNE4-202ENST00000340477 RENBPP51606 427 aa19.48■□□□□ 0.71
SYNE4-202ENST00000340477 METAP1P53582 386 aa19.48■□□□□ 0.71
SYNE4-202ENST00000340477 MMRN1Q13201 1228 aa19.48■□□□□ 0.71
SYNE4-202ENST00000340477 ZNF235Q14590 738 aa19.48■□□□□ 0.71
SYNE4-202ENST00000340477 RSPO4Q2I0M5 234 aaPredicted RBP19.48■□□□□ 0.71
SYNE4-202ENST00000340477 ATP13A4Q4VNC1 1196 aa19.48■□□□□ 0.71
SYNE4-202ENST00000340477 ANKRD20A8PQ5CZ79 823 aa19.48■□□□□ 0.71
SYNE4-202ENST00000340477 CFAP58Q5T655 872 aa19.48■□□□□ 0.71
SYNE4-202ENST00000340477 ATXN7L2Q5T6C5 722 aaPredicted RBP19.48■□□□□ 0.71
SYNE4-202ENST00000340477 LRRC49Q8IUZ0 686 aa19.48■□□□□ 0.71
SYNE4-202ENST00000340477 ARRDC3Q96B67 414 aa19.48■□□□□ 0.71
SYNE4-202ENST00000340477 MAK16Q9BXY0 300 aaKnown RBP19.48■□□□□ 0.71
SYNE4-202ENST00000340477 TMEM9BQ9NQ34 198 aa19.48■□□□□ 0.71
SYNE4-202ENST00000340477 ETNK2Q9NVF9 386 aa19.48■□□□□ 0.71
SYNE4-202ENST00000340477 HAUS2Q9NVX0 235 aa19.48■□□□□ 0.71
SYNE4-202ENST00000340477 SEPT3Q9UH03 358 aa19.48■□□□□ 0.71
SYNE4-202ENST00000340477 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.48■□□□□ 0.71
SYNE4-202ENST00000340477 SHROOM3Q8TF72 1996 aa19.47■□□□□ 0.71
SYNE4-202ENST00000340477 PSTPIP1O43586 416 aa19.47■□□□□ 0.71
SYNE4-202ENST00000340477 UGT2B4P06133 528 aa19.47■□□□□ 0.71
SYNE4-202ENST00000340477 COMTP21964 271 aa19.47■□□□□ 0.71
SYNE4-202ENST00000340477 KDELR1P24390 212 aa19.47■□□□□ 0.71
SYNE4-202ENST00000340477 MAPK8P45983 427 aa19.47■□□□□ 0.71
SYNE4-202ENST00000340477 ID4P47928 161 aa19.47■□□□□ 0.71
SYNE4-202ENST00000340477 ARSEP51690 589 aa19.47■□□□□ 0.71
SYNE4-202ENST00000340477 AFF3P51826 1226 aaKnown RBP19.47■□□□□ 0.71
SYNE4-202ENST00000340477 LIMK1P53667 647 aa19.47■□□□□ 0.71
SYNE4-202ENST00000340477 IRX4P78413 519 aa19.47■□□□□ 0.71
SYNE4-202ENST00000340477 ZNF805Q5CZA5 627 aa19.47■□□□□ 0.71
SYNE4-202ENST00000340477 PIP5KL1Q5T9C9 394 aa19.47■□□□□ 0.71
SYNE4-202ENST00000340477 C11orf63Q6NUN7 778 aa19.47■□□□□ 0.71
SYNE4-202ENST00000340477 ADAT2Q7Z6V5 191 aaKnown RBP19.47■□□□□ 0.71
SYNE4-202ENST00000340477 PRPF39Q86UA1 669 aaKnown RBP19.47■□□□□ 0.71
SYNE4-202ENST00000340477 VSIG1Q86XK7 387 aa19.47■□□□□ 0.71
SYNE4-202ENST00000340477 PAF1Q8N7H5 531 aa19.47■□□□□ 0.71
SYNE4-202ENST00000340477 FAM131CQ96AQ9 280 aa19.47■□□□□ 0.71
SYNE4-202ENST00000340477 SKA1Q96BD8 255 aa19.47■□□□□ 0.71
SYNE4-202ENST00000340477 EXOC2Q96KP1 924 aa19.47■□□□□ 0.71
SYNE4-202ENST00000340477 LHX3Q9UBR4 397 aa19.47■□□□□ 0.71
SYNE4-202ENST00000340477 ZNF487B1APH4 448 aa19.46■□□□□ 0.71
SYNE4-202ENST00000340477 NRDCO43847 1150 aa19.46■□□□□ 0.71
SYNE4-202ENST00000340477 BUB1BO60566 1050 aaPredicted RBP19.46■□□□□ 0.71
SYNE4-202ENST00000340477 ADRB3P13945 408 aa19.46■□□□□ 0.71
SYNE4-202ENST00000340477 ENGP17813 658 aa19.46■□□□□ 0.71
SYNE4-202ENST00000340477 MX2P20592 715 aa19.46■□□□□ 0.71
SYNE4-202ENST00000340477 XPAP23025 273 aaPredicted RBP19.46■□□□□ 0.71
SYNE4-202ENST00000340477 HSPA9P38646 679 aaKnown RBP19.46■□□□□ 0.71
SYNE4-202ENST00000340477 VAV2P52735 878 aa19.46■□□□□ 0.71
SYNE4-202ENST00000340477 LBRQ14739 615 aaKnown RBP19.46■□□□□ 0.71
SYNE4-202ENST00000340477 CYTH1Q15438 398 aa19.46■□□□□ 0.71
SYNE4-202ENST00000340477 IFI16Q16666 785 aaKnown RBP19.46■□□□□ 0.71
SYNE4-202ENST00000340477 SETMARQ53H47 684 aaPredicted RBP19.46■□□□□ 0.71
SYNE4-202ENST00000340477 SLC45A4Q5BKX6 768 aa19.46■□□□□ 0.71
SYNE4-202ENST00000340477 NEK5Q6P3R8 708 aa19.46■□□□□ 0.71
SYNE4-202ENST00000340477 GDPD4Q6W3E5 623 aa19.46■□□□□ 0.71
SYNE4-202ENST00000340477 RAD9BQ6WBX8 426 aa19.46■□□□□ 0.71
SYNE4-202ENST00000340477 ARHGAP36Q6ZRI8 547 aa19.46■□□□□ 0.71
SYNE4-202ENST00000340477 DAAM2Q86T65 1068 aa19.46■□□□□ 0.71
SYNE4-202ENST00000340477 TRIM69Q86WT6 500 aa19.46■□□□□ 0.71
SYNE4-202ENST00000340477 NETO2Q8NC67 525 aa19.46■□□□□ 0.71
SYNE4-202ENST00000340477 RAB7BQ96AH8 199 aa19.46■□□□□ 0.71
SYNE4-202ENST00000340477 GTPBP2Q9BX10 602 aaKnown RBP19.46■□□□□ 0.71
SYNE4-202ENST00000340477 ZDHHC5Q9C0B5 715 aa19.46■□□□□ 0.71
SYNE4-202ENST00000340477 CAPN10Q9HC96 672 aa19.46■□□□□ 0.71
SYNE4-202ENST00000340477 MFHAS1Q9Y4C4 1052 aa19.46■□□□□ 0.71
SYNE4-202ENST00000340477 CFAP54Q96N23 3096 aa19.46■□□□□ 0.71
SYNE4-202ENST00000340477 CEP250Q9BV73 2442 aa19.45■□□□□ 0.7
SYNE4-202ENST00000340477 A0A1W2PPC4 97 aa19.45■□□□□ 0.7
SYNE4-202ENST00000340477 NEMP1O14524 444 aa19.45■□□□□ 0.7
SYNE4-202ENST00000340477 MFSD11O43934 449 aa19.45■□□□□ 0.7
SYNE4-202ENST00000340477 GDF9O60383 454 aa19.45■□□□□ 0.7
SYNE4-202ENST00000340477 NEBLO76041 1014 aa19.45■□□□□ 0.7
SYNE4-202ENST00000340477 PCDH8O95206 1070 aa19.45■□□□□ 0.7
SYNE4-202ENST00000340477 IGHV4-34P06331 123 aa19.45■□□□□ 0.7
SYNE4-202ENST00000340477 ZFXP17010 805 aaPredicted RBP19.45■□□□□ 0.7
SYNE4-202ENST00000340477 IL4RP24394 825 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms