RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 LHX3Q9UBR4 397 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 MUC22E2RYF6 1773 aaPredicted RBP7.94□□□□□ -1.14
TMC1-202ENST00000340019 TTC24A2A3L6 582 aaPredicted RBP7.94□□□□□ -1.14
TMC1-202ENST00000340019 GOLGA6CA6NDK9 693 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 GOLGA6BA6NDN3 693 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 C2CD4DB7Z1M9 353 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 K7ERQ8 282 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 PSMD3O43242 534 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 SMAD6O43541 496 aaKnown RBP7.94□□□□□ -1.14
TMC1-202ENST00000340019 SASH3O75995 380 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 GOLGA6DP0CG33 693 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 GDI1P31150 447 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 HSD17B3P37058 310 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 LMAN1P49257 510 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 DGKGP49619 791 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 GEMP55040 296 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 SULT2A1Q06520 285 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 ITKQ08881 620 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 MESP2Q0VG99 397 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 SPARCL1Q14515 664 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 SLC14A2Q15849 920 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 UBAP2Q5T6F2 1119 aaKnown RBP7.94□□□□□ -1.14
TMC1-202ENST00000340019 METTL3Q86U44 580 aaKnown RBP7.94□□□□□ -1.14
TMC1-202ENST00000340019 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.94□□□□□ -1.14
TMC1-202ENST00000340019 HLA-CQ95604 372 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 SEMA3CQ99985 751 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 CASS4Q9NQ75 786 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 HAUS2Q9NVX0 235 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 GOLGA6AQ9NYA3 693 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 FCF1Q9Y324 198 aaKnown RBP7.94□□□□□ -1.14
TMC1-202ENST00000340019 TEX264Q9Y6I9 313 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 BANF1O75531 89 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 SRCP12931 536 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 SP100P23497 879 aaPredicted RBP7.94□□□□□ -1.14
TMC1-202ENST00000340019 GJA4P35212 333 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 OPRD1P41143 372 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 CD86P42081 329 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 MAGEA4P43358 317 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 TNNT3P45378 269 aaPredicted RBP7.94□□□□□ -1.14
TMC1-202ENST00000340019 SLC6A11P48066 632 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 VASPP50552 380 aaPredicted RBP7.94□□□□□ -1.14
TMC1-202ENST00000340019 SARNPP82979 210 aaKnown RBP7.94□□□□□ -1.14
TMC1-202ENST00000340019 PDIA2Q13087 525 aaKnown RBP7.94□□□□□ -1.14
TMC1-202ENST00000340019 MTM1Q13496 603 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 HABP4Q5JVS0 413 aaKnown RBP7.94□□□□□ -1.14
TMC1-202ENST00000340019 MBLAC2Q68D91 279 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 RANBP10Q6VN20 620 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 TRMT10CQ7L0Y3 403 aaKnown RBP7.94□□□□□ -1.14
TMC1-202ENST00000340019 HDXQ7Z353 690 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 SH2D3CQ8N5H7 860 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 VOPP1Q96AW1 172 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 NUDCD1Q96RS6 583 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 PABPC3Q9H361 631 aaKnown RBP7.94□□□□□ -1.14
TMC1-202ENST00000340019 SAYSD1Q9NPB0 183 aa7.94□□□□□ -1.14
TMC1-202ENST00000340019 COL6A3P12111 3177 aa7.93□□□□□ -1.14
TMC1-202ENST00000340019 INSIG1O15503 277 aa7.93□□□□□ -1.14
TMC1-202ENST00000340019 RIPK2O43353 540 aa7.93□□□□□ -1.14
TMC1-202ENST00000340019 USP12O75317 370 aa7.93□□□□□ -1.14
TMC1-202ENST00000340019 CES1P23141 567 aa7.93□□□□□ -1.14
TMC1-202ENST00000340019 EIF2DP41214 584 aaKnown RBP7.93□□□□□ -1.14
TMC1-202ENST00000340019 STK19P49842 368 aaPredicted RBP7.93□□□□□ -1.14
TMC1-202ENST00000340019 ECT2LQ008S8 904 aa7.93□□□□□ -1.14
TMC1-202ENST00000340019 NR1H3Q13133 447 aa7.93□□□□□ -1.14
TMC1-202ENST00000340019 SKIV2LQ15477 1246 aaKnown RBP7.93□□□□□ -1.14
TMC1-202ENST00000340019 SMAD2Q15796 467 aaKnown RBP7.93□□□□□ -1.14
TMC1-202ENST00000340019 NAPEPLDQ6IQ20 393 aa7.93□□□□□ -1.14
TMC1-202ENST00000340019 DENND5AQ6IQ26 1287 aa7.93□□□□□ -1.14
TMC1-202ENST00000340019 IGDCC3Q8IVU1 814 aa7.93□□□□□ -1.14
TMC1-202ENST00000340019 ZBED8Q8IZ13 594 aa7.93□□□□□ -1.14
TMC1-202ENST00000340019 IQCKQ8N0W5 287 aa7.93□□□□□ -1.14
TMC1-202ENST00000340019 ATP11CQ8NB49 1132 aa7.93□□□□□ -1.14
TMC1-202ENST00000340019 IPMKQ8NFU5 416 aa7.93□□□□□ -1.14
TMC1-202ENST00000340019 OR52K1Q8NGK4 314 aa7.93□□□□□ -1.14
TMC1-202ENST00000340019 WFIKKN2Q8TEU8 576 aa7.93□□□□□ -1.14
TMC1-202ENST00000340019 ISG20Q96AZ6 181 aaKnown RBP7.93□□□□□ -1.14
TMC1-202ENST00000340019 MYO19Q96H55 970 aa7.93□□□□□ -1.14
TMC1-202ENST00000340019 EXOC2Q96KP1 924 aa7.93□□□□□ -1.14
TMC1-202ENST00000340019 RPL10LQ96L21 214 aaKnown RBP7.93□□□□□ -1.14
TMC1-202ENST00000340019 MRGPRX3Q96LB0 322 aa7.93□□□□□ -1.14
TMC1-202ENST00000340019 SIGLEC10Q96LC7 697 aa7.93□□□□□ -1.14
TMC1-202ENST00000340019 PHF7Q9BWX1 381 aaPredicted RBP7.93□□□□□ -1.14
TMC1-202ENST00000340019 VIPAS39Q9H9C1 493 aa7.93□□□□□ -1.14
TMC1-202ENST00000340019 NOD2Q9HC29 1040 aa7.93□□□□□ -1.14
TMC1-202ENST00000340019 NINJ2Q9NZG7 142 aa7.93□□□□□ -1.14
TMC1-202ENST00000340019 MYLKQ15746 1914 aa7.93□□□□□ -1.14
TMC1-202ENST00000340019 LOC285095A0A1B0GVY8 99 aa7.93□□□□□ -1.14
TMC1-202ENST00000340019 PRRT4C9JH25 899 aa7.93□□□□□ -1.14
TMC1-202ENST00000340019 ATP8B1O43520 1251 aa7.93□□□□□ -1.14
TMC1-202ENST00000340019 PMPCBO75439 489 aa7.93□□□□□ -1.14
TMC1-202ENST00000340019 TTC4O95801 387 aa7.93□□□□□ -1.14
TMC1-202ENST00000340019 AGTP01019 485 aa7.93□□□□□ -1.14
TMC1-202ENST00000340019 POLR2EP19388 210 aaKnown RBP7.93□□□□□ -1.14
TMC1-202ENST00000340019 WNT3AP56704 352 aa7.93□□□□□ -1.14
TMC1-202ENST00000340019 PTPRNQ16849 979 aa7.93□□□□□ -1.14
TMC1-202ENST00000340019 LEXMQ3ZCV2 418 aa7.93□□□□□ -1.14
TMC1-202ENST00000340019 RALGPS1Q5JS13 557 aa7.93□□□□□ -1.14
TMC1-202ENST00000340019 DGKKQ5KSL6 1271 aa7.93□□□□□ -1.14
TMC1-202ENST00000340019 NCEH1Q6PIU2 408 aa7.93□□□□□ -1.14
TMC1-202ENST00000340019 LINC00523Q86TU6 105 aa7.93□□□□□ -1.14
TMC1-202ENST00000340019 PPM1EQ8WY54 764 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms