RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 CEP44Q9C0F1 390 aa13.6□□□□□ -0.23
NUDCD3-201ENST00000338427 FZD10Q9ULW2 581 aa13.6□□□□□ -0.23
NUDCD3-201ENST00000338427 KRIT1O00522 736 aa13.59□□□□□ -0.23
NUDCD3-201ENST00000338427 FFAR2O15552 330 aa13.59□□□□□ -0.23
NUDCD3-201ENST00000338427 SPINT1O43278 529 aa13.59□□□□□ -0.23
NUDCD3-201ENST00000338427 ATMINO43313 823 aaPredicted RBP13.59□□□□□ -0.23
NUDCD3-201ENST00000338427 RAMP2O60895 175 aa13.59□□□□□ -0.23
NUDCD3-201ENST00000338427 CALB1P05937 261 aa13.59□□□□□ -0.23
NUDCD3-201ENST00000338427 UGT2B4P06133 528 aa13.59□□□□□ -0.23
NUDCD3-201ENST00000338427 GIMD1P0DJR0 217 aa13.59□□□□□ -0.23
NUDCD3-201ENST00000338427 JUPP14923 745 aa13.59□□□□□ -0.23
NUDCD3-201ENST00000338427 HNRNPA2B1P22626 353 aaKnown RBP13.59□□□□□ -0.23
NUDCD3-201ENST00000338427 DGKAP23743 735 aa13.59□□□□□ -0.23
NUDCD3-201ENST00000338427 EPHB2P29323 1055 aa13.59□□□□□ -0.23
NUDCD3-201ENST00000338427 MAPKAPK2P49137 400 aa13.59□□□□□ -0.23
NUDCD3-201ENST00000338427 ACADVLP49748 655 aa13.59□□□□□ -0.23
NUDCD3-201ENST00000338427 NEK3P51956 506 aa13.59□□□□□ -0.23
NUDCD3-201ENST00000338427 ZNF143P52747 638 aaPredicted RBP13.59□□□□□ -0.23
NUDCD3-201ENST00000338427 SEMG2Q02383 582 aa13.59□□□□□ -0.23
NUDCD3-201ENST00000338427 TARDBPQ13148 414 aaKnown RBP eCLIP13.59□□□□□ -0.23
NUDCD3-201ENST00000338427 CYTH1Q15438 398 aa13.59□□□□□ -0.23
NUDCD3-201ENST00000338427 CA9Q16790 459 aa13.59□□□□□ -0.23
NUDCD3-201ENST00000338427 ACBD5Q5T8D3 534 aaPredicted RBP13.59□□□□□ -0.23
NUDCD3-201ENST00000338427 E4F1Q66K89 784 aaPredicted RBP13.59□□□□□ -0.23
NUDCD3-201ENST00000338427 NEK5Q6P3R8 708 aa13.59□□□□□ -0.23
NUDCD3-201ENST00000338427 DNAJC24Q6P3W2 148 aa13.59□□□□□ -0.23
NUDCD3-201ENST00000338427 TMC6Q7Z403 805 aa13.59□□□□□ -0.23
NUDCD3-201ENST00000338427 ZNF354CQ86Y25 554 aa13.59□□□□□ -0.23
NUDCD3-201ENST00000338427 ARFGAP1Q8N6T3 406 aa13.59□□□□□ -0.23
NUDCD3-201ENST00000338427 ANKRD20A12PQ8NF67 263 aa13.59□□□□□ -0.23
NUDCD3-201ENST00000338427 HMCESQ96FZ2 354 aa13.59□□□□□ -0.23
NUDCD3-201ENST00000338427 FEM1CQ96JP0 617 aa13.59□□□□□ -0.23
NUDCD3-201ENST00000338427 SYT11Q9BT88 431 aa13.59□□□□□ -0.23
NUDCD3-201ENST00000338427 TRIM7Q9C029 511 aa13.59□□□□□ -0.23
NUDCD3-201ENST00000338427 MAGEH1Q9H213 219 aa13.59□□□□□ -0.23
NUDCD3-201ENST00000338427 RTN4Q9NQC3 1192 aaKnown RBP13.59□□□□□ -0.23
NUDCD3-201ENST00000338427 KLHL11Q9NVR0 708 aa13.59□□□□□ -0.23
NUDCD3-201ENST00000338427 KLF15Q9UIH9 416 aa13.59□□□□□ -0.23
NUDCD3-201ENST00000338427 LHX6Q9UPM6 363 aa13.59□□□□□ -0.23
NUDCD3-201ENST00000338427 RASA4BC9J798 803 aa13.58□□□□□ -0.24
NUDCD3-201ENST00000338427 RASA4O43374 803 aa13.58□□□□□ -0.24
NUDCD3-201ENST00000338427 MMP20O60882 483 aa13.58□□□□□ -0.24
NUDCD3-201ENST00000338427 RFPL3O75679 317 aa13.58□□□□□ -0.24
NUDCD3-201ENST00000338427 NEBLO76041 1014 aa13.58□□□□□ -0.24
NUDCD3-201ENST00000338427 SKILP12757 684 aa13.58□□□□□ -0.24
NUDCD3-201ENST00000338427 TIMP2P16035 220 aa13.58□□□□□ -0.24
NUDCD3-201ENST00000338427 ITGB7P26010 798 aa13.58□□□□□ -0.24
NUDCD3-201ENST00000338427 AKT2P31751 481 aa13.58□□□□□ -0.24
NUDCD3-201ENST00000338427 NUDT1P36639 197 aa13.58□□□□□ -0.24
NUDCD3-201ENST00000338427 GSCP56915 257 aaPredicted RBP13.58□□□□□ -0.24
NUDCD3-201ENST00000338427 C1QBPQ07021 282 aaKnown RBP13.58□□□□□ -0.24
NUDCD3-201ENST00000338427 INAVAQ3KP66 663 aa13.58□□□□□ -0.24
NUDCD3-201ENST00000338427 GALNT15Q8N3T1 639 aa13.58□□□□□ -0.24
NUDCD3-201ENST00000338427 NTAN1Q96AB6 310 aa13.58□□□□□ -0.24
NUDCD3-201ENST00000338427 ISG20Q96AZ6 181 aaKnown RBP13.58□□□□□ -0.24
NUDCD3-201ENST00000338427 KLF6Q99612 283 aaPredicted RBP13.58□□□□□ -0.24
NUDCD3-201ENST00000338427 TMEM51Q9NW97 253 aa13.58□□□□□ -0.24
NUDCD3-201ENST00000338427 PCSK1NQ9UHG2 260 aa13.58□□□□□ -0.24
NUDCD3-201ENST00000338427 TPX2Q9ULW0 747 aaKnown RBP13.58□□□□□ -0.24
NUDCD3-201ENST00000338427 HS3ST3A1Q9Y663 406 aa13.58□□□□□ -0.24
NUDCD3-201ENST00000338427 URB1O60287 2271 aaKnown RBP13.58□□□□□ -0.24
NUDCD3-201ENST00000338427 CELSR3Q9NYQ7 3312 aa13.57□□□□□ -0.24
NUDCD3-201ENST00000338427 GOLGA6L22H0YM25 854 aa13.57□□□□□ -0.24
NUDCD3-201ENST00000338427 J3KR12 359 aa13.57□□□□□ -0.24
NUDCD3-201ENST00000338427 MAGEC1O60732 1142 aa13.57□□□□□ -0.24
NUDCD3-201ENST00000338427 PIAS2O75928 621 aa13.57□□□□□ -0.24
NUDCD3-201ENST00000338427 TMCC1O94876 653 aa13.57□□□□□ -0.24
NUDCD3-201ENST00000338427 POP4O95707 220 aaKnown RBP13.57□□□□□ -0.24
NUDCD3-201ENST00000338427 FERP16591 822 aa13.57□□□□□ -0.24
NUDCD3-201ENST00000338427 CKMT2P17540 419 aa13.57□□□□□ -0.24
NUDCD3-201ENST00000338427 RPS21P63220 83 aaKnown RBP13.57□□□□□ -0.24
NUDCD3-201ENST00000338427 CCDC15Q0P6D6 951 aa13.57□□□□□ -0.24
NUDCD3-201ENST00000338427 OVGP1Q12889 678 aa13.57□□□□□ -0.24
NUDCD3-201ENST00000338427 MAMLD1Q13495 774 aa13.57□□□□□ -0.24
NUDCD3-201ENST00000338427 FZD2Q14332 565 aa13.57□□□□□ -0.24
NUDCD3-201ENST00000338427 COL28A1Q2UY09 1125 aa13.57□□□□□ -0.24
NUDCD3-201ENST00000338427 PROX2Q3B8N5 592 aa13.57□□□□□ -0.24
NUDCD3-201ENST00000338427 ZNF805Q5CZA5 627 aa13.57□□□□□ -0.24
NUDCD3-201ENST00000338427 HES3Q5TGS1 186 aa13.57□□□□□ -0.24
NUDCD3-201ENST00000338427 DCUN1D2Q6PH85 259 aa13.57□□□□□ -0.24
NUDCD3-201ENST00000338427 GDPD4Q6W3E5 623 aa13.57□□□□□ -0.24
NUDCD3-201ENST00000338427 NYAP1Q6ZVC0 841 aa13.57□□□□□ -0.24
NUDCD3-201ENST00000338427 ZNF571Q7Z3V5 609 aaPredicted RBP13.57□□□□□ -0.24
NUDCD3-201ENST00000338427 PTAR1Q7Z6K3 402 aaPredicted RBP13.57□□□□□ -0.24
NUDCD3-201ENST00000338427 ABI3BPQ7Z7G0 1075 aa13.57□□□□□ -0.24
NUDCD3-201ENST00000338427 TTC7BQ86TV6 843 aa13.57□□□□□ -0.24
NUDCD3-201ENST00000338427 TMPRSS12Q86WS5 348 aa13.57□□□□□ -0.24
NUDCD3-201ENST00000338427 TP53INP2Q8IXH6 220 aa13.57□□□□□ -0.24
NUDCD3-201ENST00000338427 PLPP6Q8IY26 295 aa13.57□□□□□ -0.24
NUDCD3-201ENST00000338427 OXR1Q8N573 874 aa13.57□□□□□ -0.24
NUDCD3-201ENST00000338427 RTL3Q8N8U3 475 aaKnown RBP13.57□□□□□ -0.24
NUDCD3-201ENST00000338427 OR2AP1Q8NGE2 309 aa13.57□□□□□ -0.24
NUDCD3-201ENST00000338427 CRELD1Q96HD1 420 aa13.57□□□□□ -0.24
NUDCD3-201ENST00000338427 PPP1R16AQ96I34 528 aa13.57□□□□□ -0.24
NUDCD3-201ENST00000338427 CELF6Q96J87 481 aaKnown RBP13.57□□□□□ -0.24
NUDCD3-201ENST00000338427 EXOC2Q96KP1 924 aa13.57□□□□□ -0.24
NUDCD3-201ENST00000338427 PEBP4Q96S96 227 aa13.57□□□□□ -0.24
NUDCD3-201ENST00000338427 CNPY3Q9BT09 278 aa13.57□□□□□ -0.24
NUDCD3-201ENST00000338427 C1QTNF2Q9BXJ5 285 aa13.57□□□□□ -0.24
NUDCD3-201ENST00000338427 HAUS4Q9H6D7 363 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms