RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 AHSPQ9NZD4 102 aa13.89□□□□□ -0.19
RTN4-202ENST00000337526 LEF1Q9UJU2 399 aaPredicted RBP13.89□□□□□ -0.19
RTN4-202ENST00000337526 IRF6O14896 467 aa13.89□□□□□ -0.19
RTN4-202ENST00000337526 CD3EAPO15446 510 aaKnown RBP13.89□□□□□ -0.19
RTN4-202ENST00000337526 SH3BGRLO75368 114 aa13.89□□□□□ -0.19
RTN4-202ENST00000337526 C4BPAP04003 597 aaKnown RBP13.89□□□□□ -0.19
RTN4-202ENST00000337526 OR56A5P0C7T3 313 aa13.89□□□□□ -0.19
RTN4-202ENST00000337526 ARF4P18085 180 aaPredicted RBP13.89□□□□□ -0.19
RTN4-202ENST00000337526 ABHD15Q6UXT9 468 aa13.89□□□□□ -0.19
RTN4-202ENST00000337526 WDR55Q9H6Y2 383 aaPredicted RBP13.89□□□□□ -0.19
RTN4-202ENST00000337526 TRPV2Q9Y5S1 764 aa13.89□□□□□ -0.19
RTN4-202ENST00000337526 AP4B1Q9Y6B7 739 aa13.89□□□□□ -0.19
RTN4-202ENST00000337526 FAM155BO75949 473 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 CDH13P55290 713 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 MRPS5P82675 430 aaKnown RBP13.88□□□□□ -0.19
RTN4-202ENST00000337526 GBE1Q04446 702 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 PRKG2Q13237 762 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 DGKZQ13574 1117 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 FSCN1Q16658 493 aaKnown RBP13.88□□□□□ -0.19
RTN4-202ENST00000337526 PTPRNQ16849 979 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 FAM187BQ17R55 369 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 SPANXN2Q5MJ10 180 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 POTEHQ6S545 545 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 KBTBD2Q8IY47 623 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 PPP1R13LQ8WUF5 828 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 SELENOMQ8WWX9 145 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 SEMA3CQ99985 751 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 ST6GALNAC4Q9H4F1 302 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 CAB39LQ9H9S4 337 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 H3BN98 237 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 MAP3K13O43283 966 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 ZBTB14O43829 449 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 B4GALT4O60513 344 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 CREB1P16220 341 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 GPR15P49685 360 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 ARL4DP49703 201 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 BEX3Q00994 111 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 PTP4A2Q12974 167 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 TRIM25Q14258 630 aaKnown RBP13.88□□□□□ -0.19
RTN4-202ENST00000337526 MAPKAPK3Q16644 382 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 GJC2Q5T442 439 aaPredicted RBP13.88□□□□□ -0.19
RTN4-202ENST00000337526 SDE2Q6IQ49 451 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 TRMT11Q7Z4G4 463 aaKnown RBP13.88□□□□□ -0.19
RTN4-202ENST00000337526 LRRC49Q8IUZ0 686 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 PQLC1Q8N2U9 271 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 PLD5Q8N7P1 536 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 BSNDQ8WZ55 320 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 CDH19Q9H159 772 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 REEP1Q9H902 201 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 POLR1BQ9H9Y6 1135 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 CDH9Q9ULB4 789 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 A0A1B0GW55 424 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 C2orf71A6NGG8 1288 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 A8MX80 341 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 DUX4L2P0CJ85 424 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 DUX4L3P0CJ86 424 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 DUX4L4P0CJ87 422 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 DUX4L5P0CJ88 424 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 DUX4L6P0CJ89 424 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 DUX4L7P0CJ90 424 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 CRHR1P34998 444 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 INAQ16352 499 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 CRY1Q16526 586 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 RAP1GAP2Q684P5 730 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 ADGRD1Q6QNK2 874 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 SFRP1Q8N474 314 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 TEKT5Q96M29 485 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 DUX4Q9UBX2 424 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 AP3M1Q9Y2T2 418 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 PNMA8CA0A1B0GUJ8 204 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 TRAFD1O14545 582 aaPredicted RBP13.88□□□□□ -0.19
RTN4-202ENST00000337526 TALDO1P37837 337 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 EIF2B2P49770 351 aaKnown RBP13.88□□□□□ -0.19
RTN4-202ENST00000337526 RSBN1Q5VWQ0 802 aaPredicted RBP13.88□□□□□ -0.19
RTN4-202ENST00000337526 SCIMPQ6UWF3 145 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 CASP12Q6UXS9 341 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 OOSP2Q86WS3 158 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 SYT12Q8IV01 421 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 ARRDC4Q8NCT1 418 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 C19orf18Q8NEA5 215 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 SERAC1Q96JX3 654 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 OSGEPL1Q9H4B0 414 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 RHOJQ9H4E5 214 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 ARHGAP28Q9P2N2 729 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 CHKBQ9Y259 395 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 KLHL20Q9Y2M5 609 aa13.88□□□□□ -0.19
RTN4-202ENST00000337526 HBS1LQ9Y450 684 aaKnown RBP13.88□□□□□ -0.19
RTN4-202ENST00000337526 KCNH1O95259 989 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 DGKAP23743 735 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 PTGIRP43119 386 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 TUFMP49411 452 aaKnown RBP13.87□□□□□ -0.19
RTN4-202ENST00000337526 TNK2Q07912 1038 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 KLF10Q13118 480 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 CRY2Q49AN0 593 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 ARMC6Q6NXE6 501 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 SPESP1Q6UW49 350 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 LCLAT1Q6UWP7 414 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 CLYBLQ8N0X4 340 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 CDYL2Q8N8U2 506 aa13.87□□□□□ -0.19
RTN4-202ENST00000337526 C12orf50Q8NA57 414 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms