RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 INHBEP58166 350 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 TNFAIP2Q03169 654 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 PPP1R8Q12972 351 aaKnown RBP13.39□□□□□ -0.27
COL2A1-201ENST00000337299 STILQ15468 1287 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 ZNF423Q2M1K9 1284 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 NEK5Q6P3R8 708 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 UGT2A3Q6UWM9 527 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 C11orf74Q86VG3 221 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 C4orf19Q8IY42 314 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 ZNF540Q8NDQ6 660 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 TSEN34Q9BSV6 310 aaKnown RBP13.39□□□□□ -0.27
COL2A1-201ENST00000337299 ZNF221Q9UK13 617 aa13.39□□□□□ -0.27
COL2A1-201ENST00000337299 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.39□□□□□ -0.27
COL2A1-201ENST00000337299 MTF2Q9Y483 593 aaPredicted RBP13.39□□□□□ -0.27
COL2A1-201ENST00000337299 A8MU76 341 aa13.38□□□□□ -0.27
COL2A1-201ENST00000337299 CYP7B1O75881 506 aa13.38□□□□□ -0.27
COL2A1-201ENST00000337299 IFI30P13284 250 aa13.38□□□□□ -0.27
COL2A1-201ENST00000337299 RPL10P27635 214 aaKnown RBP13.38□□□□□ -0.27
COL2A1-201ENST00000337299 HSD17B4P51659 736 aa13.38□□□□□ -0.27
COL2A1-201ENST00000337299 RAB14P61106 215 aa13.38□□□□□ -0.27
COL2A1-201ENST00000337299 RBP5P82980 135 aa13.38□□□□□ -0.27
COL2A1-201ENST00000337299 SZRD1Q7Z422 152 aa13.38□□□□□ -0.27
COL2A1-201ENST00000337299 NSMCE3Q96MG7 304 aa13.38□□□□□ -0.27
COL2A1-201ENST00000337299 RBBP8Q99708 897 aa13.38□□□□□ -0.27
COL2A1-201ENST00000337299 PRRG3Q9BZD7 231 aa13.38□□□□□ -0.27
COL2A1-201ENST00000337299 DMAC2Q9NW81 257 aa13.38□□□□□ -0.27
COL2A1-201ENST00000337299 OAZ3Q9UMX2 235 aa13.38□□□□□ -0.27
COL2A1-201ENST00000337299 FAM95CA0A1B0GW59 222 aa13.38□□□□□ -0.27
COL2A1-201ENST00000337299 CCDC154A6NI56 674 aa13.38□□□□□ -0.27
COL2A1-201ENST00000337299 AZGP1P25311 298 aaKnown RBP13.38□□□□□ -0.27
COL2A1-201ENST00000337299 ECT2LQ008S8 904 aa13.38□□□□□ -0.27
COL2A1-201ENST00000337299 MERTKQ12866 999 aa13.38□□□□□ -0.27
COL2A1-201ENST00000337299 NIPAL1Q6NVV3 410 aa13.38□□□□□ -0.27
COL2A1-201ENST00000337299 EID3Q8N140 333 aa13.38□□□□□ -0.27
COL2A1-201ENST00000337299 STX19Q8N4C7 294 aa13.38□□□□□ -0.27
COL2A1-201ENST00000337299 OTULINQ96BN8 352 aa13.38□□□□□ -0.27
COL2A1-201ENST00000337299 RMDN1Q96DB5 314 aa13.38□□□□□ -0.27
COL2A1-201ENST00000337299 FICDQ9BVA6 458 aa13.38□□□□□ -0.27
COL2A1-201ENST00000337299 CCDC106Q9BWC9 280 aa13.38□□□□□ -0.27
COL2A1-201ENST00000337299 C1orf21Q9H246 121 aa13.38□□□□□ -0.27
COL2A1-201ENST00000337299 NDFIP2Q9NV92 336 aa13.38□□□□□ -0.27
COL2A1-201ENST00000337299 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.38□□□□□ -0.27
COL2A1-201ENST00000337299 ASTN2O75129 1339 aaPredicted RBP13.38□□□□□ -0.27
COL2A1-201ENST00000337299 RNASEH2AO75792 299 aaKnown RBP13.38□□□□□ -0.27
COL2A1-201ENST00000337299 RECQL5O94762 991 aaPredicted RBP13.38□□□□□ -0.27
COL2A1-201ENST00000337299 UNGP13051 313 aaPredicted RBP13.38□□□□□ -0.27
COL2A1-201ENST00000337299 PCSK6P29122 969 aa13.38□□□□□ -0.27
COL2A1-201ENST00000337299 CD151P48509 253 aa13.38□□□□□ -0.27
COL2A1-201ENST00000337299 SERPINH1P50454 418 aaKnown RBP13.38□□□□□ -0.27
COL2A1-201ENST00000337299 POU4F1Q01851 419 aa13.38□□□□□ -0.27
COL2A1-201ENST00000337299 KLF1Q13351 362 aaPredicted RBP13.38□□□□□ -0.27
COL2A1-201ENST00000337299 NOMO1Q15155 1222 aa13.38□□□□□ -0.27
COL2A1-201ENST00000337299 ANKDD1AQ495B1 522 aa13.38□□□□□ -0.27
COL2A1-201ENST00000337299 VPS26BQ4G0F5 336 aa13.38□□□□□ -0.27
COL2A1-201ENST00000337299 SPANXN3Q5MJ09 141 aa13.38□□□□□ -0.27
COL2A1-201ENST00000337299 FBXL19Q6PCT2 694 aa13.38□□□□□ -0.27
COL2A1-201ENST00000337299 SLC22A16Q86VW1 577 aa13.38□□□□□ -0.27
COL2A1-201ENST00000337299 FNDC5Q8NAU1 212 aa13.38□□□□□ -0.27
COL2A1-201ENST00000337299 SEPT1Q8WYJ6 367 aa13.38□□□□□ -0.27
COL2A1-201ENST00000337299 EMID1Q96A84 441 aaPredicted RBP13.38□□□□□ -0.27
COL2A1-201ENST00000337299 HAPLN3Q96S86 360 aa13.38□□□□□ -0.27
COL2A1-201ENST00000337299 VTA1Q9NP79 307 aa13.38□□□□□ -0.27
COL2A1-201ENST00000337299 CPSF3Q9UKF6 684 aaKnown RBP13.38□□□□□ -0.27
COL2A1-201ENST00000337299 SPEF1Q9Y4P9 236 aa13.38□□□□□ -0.27
COL2A1-201ENST00000337299 A0A087WZ62 844 aa13.37□□□□□ -0.27
COL2A1-201ENST00000337299 WNT10BO00744 389 aa13.37□□□□□ -0.27
COL2A1-201ENST00000337299 FADS2O95864 444 aaKnown RBP13.37□□□□□ -0.27
COL2A1-201ENST00000337299 LTFP02788 710 aa13.37□□□□□ -0.27
COL2A1-201ENST00000337299 LRRC74AQ0VAA2 488 aa13.37□□□□□ -0.27
COL2A1-201ENST00000337299 IKBKEQ14164 716 aa13.37□□□□□ -0.27
COL2A1-201ENST00000337299 MGAT5BQ3V5L5 792 aa13.37□□□□□ -0.27
COL2A1-201ENST00000337299 FGD3Q5JSP0 725 aa13.37□□□□□ -0.27
COL2A1-201ENST00000337299 TJAP1Q5JTD0 557 aa13.37□□□□□ -0.27
COL2A1-201ENST00000337299 KLHL17Q6TDP4 642 aa13.37□□□□□ -0.27
COL2A1-201ENST00000337299 APOBEC3FQ8IUX4 373 aaKnown RBP13.37□□□□□ -0.27
COL2A1-201ENST00000337299 CCDC126Q96EE4 140 aa13.37□□□□□ -0.27
COL2A1-201ENST00000337299 CORO1BQ9BR76 489 aa13.37□□□□□ -0.27
COL2A1-201ENST00000337299 ALG9Q9H6U8 611 aa13.37□□□□□ -0.27
COL2A1-201ENST00000337299 AGO4Q9HCK5 861 aaKnown RBP13.37□□□□□ -0.27
COL2A1-201ENST00000337299 RIC8BQ9NVN3 520 aa13.37□□□□□ -0.27
COL2A1-201ENST00000337299 DDIT4Q9NX09 232 aa13.37□□□□□ -0.27
COL2A1-201ENST00000337299 PCDHGA4Q9Y5G9 962 aa13.37□□□□□ -0.27
COL2A1-201ENST00000337299 MAPTP10636 758 aaKnown RBP13.37□□□□□ -0.27
COL2A1-201ENST00000337299 VDRP11473 427 aa13.37□□□□□ -0.27
COL2A1-201ENST00000337299 SIM2Q14190 667 aaPredicted RBP13.37□□□□□ -0.27
COL2A1-201ENST00000337299 SQLEQ14534 574 aa13.37□□□□□ -0.27
COL2A1-201ENST00000337299 NR6A1Q15406 480 aa13.37□□□□□ -0.27
COL2A1-201ENST00000337299 AMER2Q8N7J2 671 aa13.37□□□□□ -0.27
COL2A1-201ENST00000337299 ENKURQ8TC29 256 aa13.37□□□□□ -0.27
COL2A1-201ENST00000337299 HM13Q8TCT9 377 aa13.37□□□□□ -0.27
COL2A1-201ENST00000337299 RNF19AQ9NV58 838 aa13.37□□□□□ -0.27
COL2A1-201ENST00000337299 BNIP3LO60238 219 aa13.37□□□□□ -0.27
COL2A1-201ENST00000337299 PTPN1P18031 435 aaKnown RBP13.37□□□□□ -0.27
COL2A1-201ENST00000337299 ATP6V1E1P36543 226 aa13.37□□□□□ -0.27
COL2A1-201ENST00000337299 NDST1P52848 882 aa13.37□□□□□ -0.27
COL2A1-201ENST00000337299 PTP4A2Q12974 167 aa13.37□□□□□ -0.27
COL2A1-201ENST00000337299 TRIM32Q13049 653 aa13.37□□□□□ -0.27
COL2A1-201ENST00000337299 SMU1Q2TAY7 513 aa13.37□□□□□ -0.27
COL2A1-201ENST00000337299 UBE2J2Q8N2K1 259 aa13.37□□□□□ -0.27
COL2A1-201ENST00000337299 SLC35B2Q8TB61 432 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms