RNA–Protein interactions for RNA: ENST00000336300.9

MRPL55-202, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-202ENST00000336300 TBC1D3CQ6IPX1 549 aa16.04■□□□□ 0.16
MRPL55-202ENST00000336300 FBXL19Q6PCT2 694 aa16.04■□□□□ 0.16
MRPL55-202ENST00000336300 ARHGAP36Q6ZRI8 547 aa16.04■□□□□ 0.16
MRPL55-202ENST00000336300 RFX6Q8HWS3 928 aa16.04■□□□□ 0.16
MRPL55-202ENST00000336300 CCDC50Q8IVM0 306 aa16.04■□□□□ 0.16
MRPL55-202ENST00000336300 KATNAL2Q8IYT4 538 aa16.04■□□□□ 0.16
MRPL55-202ENST00000336300 TBC1D3Q8IZP1 549 aaPredicted RBP16.04■□□□□ 0.16
MRPL55-202ENST00000336300 DCLK2Q8N568 766 aa16.04■□□□□ 0.16
MRPL55-202ENST00000336300 C12orf50Q8NA57 414 aaPredicted RBP16.04■□□□□ 0.16
MRPL55-202ENST00000336300 HDAC8Q9BY41 377 aa16.04■□□□□ 0.16
MRPL55-202ENST00000336300 GOLPH3Q9H4A6 298 aa16.04■□□□□ 0.16
MRPL55-202ENST00000336300 SEMA4GQ9NTN9 838 aa16.04■□□□□ 0.16
MRPL55-202ENST00000336300 SERGEFQ9UGK8 458 aa16.04■□□□□ 0.16
MRPL55-202ENST00000336300 AMFRQ9UKV5 643 aa16.04■□□□□ 0.16
MRPL55-202ENST00000336300 MFHAS1Q9Y4C4 1052 aa16.04■□□□□ 0.16
MRPL55-202ENST00000336300 WASF2Q9Y6W5 498 aa16.04■□□□□ 0.16
MRPL55-202ENST00000336300 FRYLO94915 3013 aa16.04■□□□□ 0.16
MRPL55-202ENST00000336300 PLXND1Q9Y4D7 1925 aa16.04■□□□□ 0.16
MRPL55-202ENST00000336300 ABCA7Q8IZY2 2146 aa16.03■□□□□ 0.16
MRPL55-202ENST00000336300 NUP205Q92621 2012 aa16.03■□□□□ 0.16
MRPL55-202ENST00000336300 C3orf70A6NLC5 250 aaPredicted RBP16.03■□□□□ 0.16
MRPL55-202ENST00000336300 MAFKO60675 156 aa16.03■□□□□ 0.16
MRPL55-202ENST00000336300 NEBLO76041 1014 aa16.03■□□□□ 0.16
MRPL55-202ENST00000336300 FSBPO95073 299 aa16.03■□□□□ 0.16
MRPL55-202ENST00000336300 PTMAP06454 111 aaKnown RBP16.03■□□□□ 0.16
MRPL55-202ENST00000336300 ZNF806P0C7X5 589 aa16.03■□□□□ 0.16
MRPL55-202ENST00000336300 ITPKAP23677 461 aa16.03■□□□□ 0.16
MRPL55-202ENST00000336300 ITGB7P26010 798 aa16.03■□□□□ 0.16
MRPL55-202ENST00000336300 DRD3P35462 400 aa16.03■□□□□ 0.16
MRPL55-202ENST00000336300 HSPA9P38646 679 aaKnown RBP16.03■□□□□ 0.16
MRPL55-202ENST00000336300 GARSP41250 739 aaKnown RBP16.03■□□□□ 0.16
MRPL55-202ENST00000336300 MAPK8P45983 427 aa16.03■□□□□ 0.16
MRPL55-202ENST00000336300 GALNT2Q10471 571 aa16.03■□□□□ 0.16
MRPL55-202ENST00000336300 ZNF805Q5CZA5 627 aa16.03■□□□□ 0.16
MRPL55-202ENST00000336300 CFAP58Q5T655 872 aa16.03■□□□□ 0.16
MRPL55-202ENST00000336300 ATXN7L2Q5T6C5 722 aaPredicted RBP16.03■□□□□ 0.16
MRPL55-202ENST00000336300 GDPD4Q6W3E5 623 aa16.03■□□□□ 0.16
MRPL55-202ENST00000336300 ERN2Q76MJ5 926 aaKnown RBP16.03■□□□□ 0.16
MRPL55-202ENST00000336300 PEX26Q7Z412 305 aa16.03■□□□□ 0.16
MRPL55-202ENST00000336300 SLC41A1Q8IVJ1 513 aa16.03■□□□□ 0.16
MRPL55-202ENST00000336300 PQLC3Q8N755 202 aa16.03■□□□□ 0.16
MRPL55-202ENST00000336300 UBL4BQ8N7F7 174 aa16.03■□□□□ 0.16
MRPL55-202ENST00000336300 CCNYQ8ND76 341 aa16.03■□□□□ 0.16
MRPL55-202ENST00000336300 OR6K2Q8NGY2 324 aa16.03■□□□□ 0.16
MRPL55-202ENST00000336300 EXD1Q8NHP7 514 aa16.03■□□□□ 0.16
MRPL55-202ENST00000336300 UBE2Q2Q8WVN8 375 aa16.03■□□□□ 0.16
MRPL55-202ENST00000336300 SNX19Q92543 992 aa16.03■□□□□ 0.16
MRPL55-202ENST00000336300 CPEB1Q9BZB8 566 aaKnown RBP16.03■□□□□ 0.16
MRPL55-202ENST00000336300 C6orf106Q9H6K1 298 aaPredicted RBP16.03■□□□□ 0.16
MRPL55-202ENST00000336300 EVLQ9UI08 416 aaPredicted RBP16.03■□□□□ 0.16
MRPL55-202ENST00000336300 PILRBQ9UKJ0 227 aa16.03■□□□□ 0.16
MRPL55-202ENST00000336300 HEY1Q9Y5J3 304 aa16.03■□□□□ 0.16
MRPL55-202ENST00000336300 THADAQ6YHU6 1953 aa16.03■□□□□ 0.16
MRPL55-202ENST00000336300 SPAG17Q6Q759 2223 aa16.03■□□□□ 0.16
MRPL55-202ENST00000336300 WDR87Q6ZQQ6 2873 aa16.02■□□□□ 0.16
MRPL55-202ENST00000336300 PRR5-ARHGAP8B1AHC4 643 aa16.02■□□□□ 0.16
MRPL55-202ENST00000336300 KHNYNO15037 678 aaKnown RBP16.02■□□□□ 0.16
MRPL55-202ENST00000336300 MFSD11O43934 449 aa16.02■□□□□ 0.16
MRPL55-202ENST00000336300 CCNCP24863 283 aa16.02■□□□□ 0.16
MRPL55-202ENST00000336300 CTNNA1P35221 906 aaKnown RBP16.02■□□□□ 0.16
MRPL55-202ENST00000336300 CSNK1DP48730 415 aa16.02■□□□□ 0.16
MRPL55-202ENST00000336300 NR2C2P49116 596 aa16.02■□□□□ 0.16
MRPL55-202ENST00000336300 NEK3P51956 506 aa16.02■□□□□ 0.16
MRPL55-202ENST00000336300 ADPRHP54922 357 aa16.02■□□□□ 0.16
MRPL55-202ENST00000336300 RWDD2BP57060 319 aa16.02■□□□□ 0.16
MRPL55-202ENST00000336300 COPS2P61201 443 aa16.02■□□□□ 0.16
MRPL55-202ENST00000336300 HNRNPDQ14103 355 aaKnown RBP16.02■□□□□ 0.16
MRPL55-202ENST00000336300 DUOXA1Q1HG43 343 aa16.02■□□□□ 0.16
MRPL55-202ENST00000336300 TFDP3Q5H9I0 405 aa16.02■□□□□ 0.16
MRPL55-202ENST00000336300 PLA2G2CQ5R387 149 aa16.02■□□□□ 0.16
MRPL55-202ENST00000336300 KIAA0895LQ68EN5 471 aa16.02■□□□□ 0.16
MRPL55-202ENST00000336300 SLC9A4Q6AI14 798 aa16.02■□□□□ 0.16
MRPL55-202ENST00000336300 NCEH1Q6PIU2 408 aa16.02■□□□□ 0.16
MRPL55-202ENST00000336300 MFSD7Q6UXD7 560 aa16.02■□□□□ 0.16
MRPL55-202ENST00000336300 TP53INP2Q8IXH6 220 aa16.02■□□□□ 0.16
MRPL55-202ENST00000336300 PAF1Q8N7H5 531 aa16.02■□□□□ 0.16
MRPL55-202ENST00000336300 TSEN2Q8NCE0 465 aaKnown RBP16.02■□□□□ 0.16
MRPL55-202ENST00000336300 DNASE2BQ8WZ79 361 aa16.02■□□□□ 0.16
MRPL55-202ENST00000336300 EXOC2Q96KP1 924 aa16.02■□□□□ 0.16
MRPL55-202ENST00000336300 PSKH2Q96QS6 385 aa16.02■□□□□ 0.16
MRPL55-202ENST00000336300 TUBGCP5Q96RT8 1024 aa16.02■□□□□ 0.16
MRPL55-202ENST00000336300 NUSAP1Q9BXS6 441 aaKnown RBP16.02■□□□□ 0.16
MRPL55-202ENST00000336300 BRD8Q9H0E9 1235 aa16.02■□□□□ 0.16
MRPL55-202ENST00000336300 MIR1-1HGQ9H1L0 117 aa16.02■□□□□ 0.16
MRPL55-202ENST00000336300 ATP13A3Q9H7F0 1226 aa16.02■□□□□ 0.16
MRPL55-202ENST00000336300 LHX3Q9UBR4 397 aa16.02■□□□□ 0.16
MRPL55-202ENST00000336300 GUCA1BQ9UMX6 200 aa16.02■□□□□ 0.16
MRPL55-202ENST00000336300 PCDHA3Q9Y5H8 950 aa16.02■□□□□ 0.16
MRPL55-202ENST00000336300 PIEZO1Q92508 2521 aa16.02■□□□□ 0.15
MRPL55-202ENST00000336300 SDK1Q7Z5N4 2213 aa16.02■□□□□ 0.15
MRPL55-202ENST00000336300 GRID2IPA4D2P6 1211 aa16.01■□□□□ 0.15
MRPL55-202ENST00000336300 MIF4GDA9UHW6 222 aaKnown RBP16.01■□□□□ 0.15
MRPL55-202ENST00000336300 PPP1R12AO14974 1030 aaPredicted RBP16.01■□□□□ 0.15
MRPL55-202ENST00000336300 MATN3O15232 486 aa16.01■□□□□ 0.15
MRPL55-202ENST00000336300 PLRG1O43660 514 aaKnown RBP16.01■□□□□ 0.15
MRPL55-202ENST00000336300 UGT2B4P06133 528 aa16.01■□□□□ 0.15
MRPL55-202ENST00000336300 XPAP23025 273 aaPredicted RBP16.01■□□□□ 0.15
MRPL55-202ENST00000336300 CTNNA2P26232 953 aa16.01■□□□□ 0.15
MRPL55-202ENST00000336300 SERPINA4P29622 427 aa16.01■□□□□ 0.15
MRPL55-202ENST00000336300 GKP32189 559 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms