RNA–Protein interactions for RNA: ENST00000334448.5

CCDC88C-202, Transcript of coiled-coil domain containing 88C, humanhuman

TSL 1 (best)

Gene CCDC88C, Length 1,055 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88C-202ENST00000334448 EPS15L1Q9UBC2 864 aa15.13■□□□□ 0.01
CCDC88C-202ENST00000334448 CDH22Q9UJ99 828 aa15.13■□□□□ 0.01
CCDC88C-202ENST00000334448 GGA2Q9UJY4 613 aa15.13■□□□□ 0.01
CCDC88C-202ENST00000334448 PRRC2BQ5JSZ5 2229 aaKnown RBP15.13■□□□□ 0.01
CCDC88C-202ENST00000334448 TRIOBPQ9H2D6 2365 aa15.12■□□□□ 0.01
CCDC88C-202ENST00000334448 LOC285095A0A1B0GVY8 99 aa15.12■□□□□ 0.01
CCDC88C-202ENST00000334448 MAGEB16A2A368 324 aa15.12■□□□□ 0.01
CCDC88C-202ENST00000334448 F5H423 210 aaPredicted RBP15.12■□□□□ 0.01
CCDC88C-202ENST00000334448 ECI2O75521 394 aa15.12■□□□□ 0.01
CCDC88C-202ENST00000334448 BANF1O75531 89 aa15.12■□□□□ 0.01
CCDC88C-202ENST00000334448 SYF2O95926 243 aaKnown RBP15.12■□□□□ 0.01
CCDC88C-202ENST00000334448 CPP00450 1065 aa15.12■□□□□ 0.01
CCDC88C-202ENST00000334448 C1QAP02745 245 aa15.12■□□□□ 0.01
CCDC88C-202ENST00000334448 SHBGP04278 402 aa15.12■□□□□ 0.01
CCDC88C-202ENST00000334448 IVLP07476 585 aa15.12■□□□□ 0.01
CCDC88C-202ENST00000334448 SERPINF2P08697 491 aa15.12■□□□□ 0.01
CCDC88C-202ENST00000334448 LAMP2P13473 410 aa15.12■□□□□ 0.01
CCDC88C-202ENST00000334448 PGAM1P18669 254 aa15.12■□□□□ 0.01
CCDC88C-202ENST00000334448 CD86P42081 329 aa15.12■□□□□ 0.01
CCDC88C-202ENST00000334448 MAPK8P45983 427 aa15.12■□□□□ 0.01
CCDC88C-202ENST00000334448 DSC2Q02487 901 aa15.12■□□□□ 0.01
CCDC88C-202ENST00000334448 GAB4Q2WGN9 574 aa15.12■□□□□ 0.01
CCDC88C-202ENST00000334448 FUT11Q495W5 492 aa15.12■□□□□ 0.01
CCDC88C-202ENST00000334448 SYCP2LQ5T4T6 812 aa15.12■□□□□ 0.01
CCDC88C-202ENST00000334448 VITQ6UXI7 678 aa15.12■□□□□ 0.01
CCDC88C-202ENST00000334448 AHI1Q8N157 1196 aa15.12■□□□□ 0.01
CCDC88C-202ENST00000334448 MICALL1Q8N3F8 863 aa15.12■□□□□ 0.01
CCDC88C-202ENST00000334448 TTC16Q8NEE8 873 aa15.12■□□□□ 0.01
CCDC88C-202ENST00000334448 STAMBPL1Q96FJ0 436 aa15.12■□□□□ 0.01
CCDC88C-202ENST00000334448 TRIB3Q96RU7 358 aa15.12■□□□□ 0.01
CCDC88C-202ENST00000334448 CEP44Q9C0F1 390 aa15.12■□□□□ 0.01
CCDC88C-202ENST00000334448 MRM3Q9HC36 420 aaKnown RBP15.12■□□□□ 0.01
CCDC88C-202ENST00000334448 EURLQ9NYK6 297 aa15.12■□□□□ 0.01
CCDC88C-202ENST00000334448 ZC3H7BQ9UGR2 993 aaKnown RBP15.12■□□□□ 0.01
CCDC88C-202ENST00000334448 CHMP2BQ9UQN3 213 aa15.12■□□□□ 0.01
CCDC88C-202ENST00000334448 TTLL3Q9Y4R7 772 aa15.12■□□□□ 0.01
CCDC88C-202ENST00000334448 ARIH1Q9Y4X5 557 aaPredicted RBP15.12■□□□□ 0.01
CCDC88C-202ENST00000334448 INSIG1O15503 277 aa15.11■□□□□ 0.01
CCDC88C-202ENST00000334448 ALDH1A2O94788 518 aa15.11■□□□□ 0.01
CCDC88C-202ENST00000334448 CISD3P0C7P0 127 aa15.11■□□□□ 0.01
CCDC88C-202ENST00000334448 HLA-DPA1P20036 260 aa15.11■□□□□ 0.01
CCDC88C-202ENST00000334448 PRKCHP24723 683 aa15.11■□□□□ 0.01
CCDC88C-202ENST00000334448 RGRP47804 291 aa15.11■□□□□ 0.01
CCDC88C-202ENST00000334448 MAXP61244 160 aa15.11■□□□□ 0.01
CCDC88C-202ENST00000334448 AP1S1P61966 158 aa15.11■□□□□ 0.01
CCDC88C-202ENST00000334448 SPARCL1Q14515 664 aa15.11■□□□□ 0.01
CCDC88C-202ENST00000334448 CEP85LQ5SZL2 805 aa15.11■□□□□ 0.01
CCDC88C-202ENST00000334448 TANGO2Q6ICL3 276 aa15.11■□□□□ 0.01
CCDC88C-202ENST00000334448 MTSS1LQ765P7 747 aa15.11■□□□□ 0.01
CCDC88C-202ENST00000334448 TMEM135Q86UB9 458 aa15.11■□□□□ 0.01
CCDC88C-202ENST00000334448 ADIPOR2Q86V24 386 aa15.11■□□□□ 0.01
CCDC88C-202ENST00000334448 ANKMY2Q8IV38 441 aa15.11■□□□□ 0.01
CCDC88C-202ENST00000334448 PALM2Q8IXS6 379 aa15.11■□□□□ 0.01
CCDC88C-202ENST00000334448 PLPP6Q8IY26 295 aa15.11■□□□□ 0.01
CCDC88C-202ENST00000334448 CNPY4Q8N129 248 aa15.11■□□□□ 0.01
CCDC88C-202ENST00000334448 RIBC1Q8N443 379 aaPredicted RBP15.11■□□□□ 0.01
CCDC88C-202ENST00000334448 IPMKQ8NFU5 416 aa15.11■□□□□ 0.01
CCDC88C-202ENST00000334448 OR2W6PQ8NHA6 318 aa15.11■□□□□ 0.01
CCDC88C-202ENST00000334448 SPOCK2Q92563 424 aa15.11■□□□□ 0.01
CCDC88C-202ENST00000334448 BHMTQ93088 406 aa15.11■□□□□ 0.01
CCDC88C-202ENST00000334448 PGM2Q96G03 612 aa15.11■□□□□ 0.01
CCDC88C-202ENST00000334448 XPO6Q96QU8 1125 aaKnown RBP15.11■□□□□ 0.01
CCDC88C-202ENST00000334448 CCDC77Q9BR77 488 aa15.11■□□□□ 0.01
CCDC88C-202ENST00000334448 DHRS4Q9BTZ2 278 aa15.11■□□□□ 0.01
CCDC88C-202ENST00000334448 FICDQ9BVA6 458 aa15.11■□□□□ 0.01
CCDC88C-202ENST00000334448 KIFC1Q9BW19 673 aa15.11■□□□□ 0.01
CCDC88C-202ENST00000334448 FSD1LQ9BXM9 530 aa15.11■□□□□ 0.01
CCDC88C-202ENST00000334448 POMKQ9H5K3 350 aa15.11■□□□□ 0.01
CCDC88C-202ENST00000334448 HPS4Q9NQG7 708 aa15.11■□□□□ 0.01
CCDC88C-202ENST00000334448 OGFRQ9NZT2 677 aa15.11■□□□□ 0.01
CCDC88C-202ENST00000334448 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.11■□□□□ 0.01
CCDC88C-202ENST00000334448 FAM237BA0A1B0GVD1 139 aa15.1■□□□□ 0.01
CCDC88C-202ENST00000334448 TCRBV9S1A1TA0A576 114 aa15.1■□□□□ 0.01
CCDC88C-202ENST00000334448 GOLGA8KD6RF30 607 aa15.1■□□□□ 0.01
CCDC88C-202ENST00000334448 H3BQF6 201 aa15.1■□□□□ 0.01
CCDC88C-202ENST00000334448 USP12O75317 370 aa15.1■□□□□ 0.01
CCDC88C-202ENST00000334448 PMPCBO75439 489 aa15.1■□□□□ 0.01
CCDC88C-202ENST00000334448 ASLP04424 464 aa15.1■□□□□ 0.01
CCDC88C-202ENST00000334448 FGF1P05230 155 aa15.1■□□□□ 0.01
CCDC88C-202ENST00000334448 ATXN1LP0C7T5 689 aaKnown RBP15.1■□□□□ 0.01
CCDC88C-202ENST00000334448 MYZAPP0CAP1 466 aa15.1■□□□□ 0.01
CCDC88C-202ENST00000334448 MGAT1P26572 445 aa15.1■□□□□ 0.01
CCDC88C-202ENST00000334448 STX2P32856 288 aa15.1■□□□□ 0.01
CCDC88C-202ENST00000334448 EIF2DP41214 584 aaKnown RBP15.1■□□□□ 0.01
CCDC88C-202ENST00000334448 SESN2P58004 480 aaPredicted RBP15.1■□□□□ 0.01
CCDC88C-202ENST00000334448 IFFO1Q0D2I5 559 aa15.1■□□□□ 0.01
CCDC88C-202ENST00000334448 MSLNQ13421 630 aaPredicted RBP15.1■□□□□ 0.01
CCDC88C-202ENST00000334448 KLHL38Q2WGJ6 581 aa15.1■□□□□ 0.01
CCDC88C-202ENST00000334448 HSP90B2PQ58FF3 399 aa15.1■□□□□ 0.01
CCDC88C-202ENST00000334448 TNFAIP8L3Q5GJ75 292 aa15.1■□□□□ 0.01
CCDC88C-202ENST00000334448 AGBL2Q5U5Z8 902 aa15.1■□□□□ 0.01
CCDC88C-202ENST00000334448 GPR153Q6NV75 609 aa15.1■□□□□ 0.01
CCDC88C-202ENST00000334448 NCEH1Q6PIU2 408 aa15.1■□□□□ 0.01
CCDC88C-202ENST00000334448 LEKR1Q6ZMV7 388 aa15.1■□□□□ 0.01
CCDC88C-202ENST00000334448 UNC5AQ6ZN44 842 aa15.1■□□□□ 0.01
CCDC88C-202ENST00000334448 C3orf62Q6ZUJ4 267 aa15.1■□□□□ 0.01
CCDC88C-202ENST00000334448 MPP5Q8N3R9 675 aa15.1■□□□□ 0.01
CCDC88C-202ENST00000334448 GSDMBQ8TAX9 411 aa15.1■□□□□ 0.01
CCDC88C-202ENST00000334448 RANBP9Q96S59 729 aa15.1■□□□□ 0.01
CCDC88C-202ENST00000334448 ECT2Q9H8V3 914 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms