RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 COPEO14579 308 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 PEX11AO75192 247 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 MT-ATP6P00846 226 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 GTF2F2P13984 249 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 UGT2B10P36537 528 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 DGKQP52824 942 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 GYS2P54840 703 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 PTPN11Q06124 597 aaPredicted RBP6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 RRP1BQ14684 758 aaKnown RBP6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 FAM189A2Q15884 450 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 RAB11BQ15907 218 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 CLVS2Q5SYC1 327 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 MTDHQ86UE4 582 aaKnown RBP6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 NPRL2Q8WTW4 380 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 MRM3Q9HC36 420 aaKnown RBP6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 VAT1LQ9HCJ6 419 aa6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 TSR3Q9UJK0 312 aaKnown RBP6.13□□□□□ -1.43
CDC42BPA-201ENST00000334218 K7ERQ8 282 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 RBMXL2O75526 392 aaKnown RBP6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 ELFN1P0C7U0 828 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 SCGB2A2Q13296 93 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 CCNYL2Q5T2Q4 361 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 ANKS3Q6ZW76 656 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 RCOR2Q8IZ40 523 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 OR4C5Q8NGB2 326 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 SHC3Q92529 594 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 ZKSCAN4Q969J2 545 aaPredicted RBP6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 MMS19Q96T76 1030 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 PCDH12Q9NPG4 1184 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 SNRKQ9NRH2 765 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 RAB6BQ9NRW1 208 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 TRMT112Q9UI30 125 aaKnown RBP6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 EDC4Q6P2E9 1401 aaKnown RBP6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 PVALEFA0A1B0GWK0 134 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 RTCAO00442 366 aaKnown RBP6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 PSAPP07602 524 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 TIE1P35590 1138 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 POLR2JP52435 117 aaKnown RBP6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 CTDSPL2Q05D32 466 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 OTUD7BQ6GQQ9 843 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 KDM7AQ6ZMT4 941 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 GALNT12Q8IXK2 581 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 C18orf8Q96DM3 657 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 ACSBG1Q96GR2 724 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 TWNKQ96RR1 684 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 PPP1R3CQ9UQK1 317 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 CFL2Q9Y281 166 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 PADI2Q9Y2J8 665 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 FAM221BA6H8Z2 402 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 H0YIN7 160 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 UGT2B4P06133 528 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 RYKP34925 604 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 RPL22P35268 128 aaKnown RBP6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 TMPOP42166 694 aaKnown RBP6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 SLC1A4P43007 532 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 ALDH3B2P48448 385 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 KLF10Q13118 480 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 GPR162Q16538 588 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 KCNV1Q6PIU1 500 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 SLC9A9Q8IVB4 645 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 FKBP10Q96AY3 582 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 SIK2Q9H0K1 926 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 TM9SF3Q9HD45 589 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 PREX2Q70Z35 1606 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 SOS2Q07890 1332 aaPredicted RBP6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 A0A0G2JND7 137 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 ERVV-2B6SEH9 535 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 FCHO1O14526 889 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 ASMTLO95671 621 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 CCND2P30279 289 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 SDC2P34741 201 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 MSX2P35548 267 aaPredicted RBP6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 HNRNPFP52597 415 aaKnown RBP6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 GSCP56915 257 aaPredicted RBP6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 PITPNAQ00169 270 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 NSUN2Q08J23 767 aaKnown RBP eCLIP6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 PON2Q15165 354 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 VWA5B1Q5TIE3 1220 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 SLITRK4Q8IW52 837 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 DEPTORQ8TB45 409 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 BPIFB1Q8TDL5 484 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 MS4A14Q96JA4 679 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 TMEM237Q96Q45 408 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 TDRD1Q9BXT4 1180 aaKnown RBP6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 CCDC167Q9P0B6 97 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 KIF13AQ9H1H9 1805 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 MAST1Q9Y2H9 1570 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 A0A1W2PPK0 400 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 TMEM210A6NLX4 147 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 CYP3A5P20815 502 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 SULT1A2P50226 295 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 HADHBP55084 474 aaKnown RBP6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 FAM26FQ5R3K3 315 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 OXR1Q8N573 874 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 ASCC1Q8N9N2 400 aaKnown RBP6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 UBTD2Q8WUN7 234 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 SERAC1Q96JX3 654 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 RDH12Q96NR8 316 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 DPP3Q9NY33 737 aa6.12□□□□□ -1.43
CDC42BPA-201ENST00000334218 ZIM2Q9NZV7 527 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms