RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 GPR17Q13304 367 aa17.62■□□□□ 0.41
DDX28-201ENST00000332395 UBAP2LQ14157 1087 aaKnown RBP17.62■□□□□ 0.41
DDX28-201ENST00000332395 RASIP1Q5U651 963 aa17.62■□□□□ 0.41
DDX28-201ENST00000332395 RAP1GAP2Q684P5 730 aa17.62■□□□□ 0.41
DDX28-201ENST00000332395 FBXL22Q6P050 247 aa17.62■□□□□ 0.41
DDX28-201ENST00000332395 RSPO2Q6UXX9 243 aaPredicted RBP17.62■□□□□ 0.41
DDX28-201ENST00000332395 NAPRTQ6XQN6 538 aa17.62■□□□□ 0.41
DDX28-201ENST00000332395 SPPL2BQ8TCT7 592 aa17.62■□□□□ 0.41
DDX28-201ENST00000332395 SREK1Q8WXA9 508 aaKnown RBP17.62■□□□□ 0.41
DDX28-201ENST00000332395 IGSF8Q969P0 613 aa17.62■□□□□ 0.41
DDX28-201ENST00000332395 IMP4Q96G21 291 aaKnown RBP17.62■□□□□ 0.41
DDX28-201ENST00000332395 KLHL5Q96PQ7 755 aa17.62■□□□□ 0.41
DDX28-201ENST00000332395 TASP1Q9H6P5 420 aa17.62■□□□□ 0.41
DDX28-201ENST00000332395 SP110Q9HB58 689 aa17.62■□□□□ 0.41
DDX28-201ENST00000332395 CPSF2Q9P2I0 782 aaKnown RBP17.62■□□□□ 0.41
DDX28-201ENST00000332395 TAGLN3Q9UI15 199 aa17.62■□□□□ 0.41
DDX28-201ENST00000332395 SORCS3Q9UPU3 1222 aa17.62■□□□□ 0.41
DDX28-201ENST00000332395 APOBEC2Q9Y235 224 aaKnown RBP17.62■□□□□ 0.41
DDX28-201ENST00000332395 PRR5-ARHGAP8B1AHC4 643 aa17.61■□□□□ 0.41
DDX28-201ENST00000332395 B2RBV5 119 aa17.61■□□□□ 0.41
DDX28-201ENST00000332395 TRIM13O60858 407 aa17.61■□□□□ 0.41
DDX28-201ENST00000332395 ENTPD5O75356 428 aa17.61■□□□□ 0.41
DDX28-201ENST00000332395 VNN2O95498 520 aa17.61■□□□□ 0.41
DDX28-201ENST00000332395 HMBSP08397 361 aa17.61■□□□□ 0.41
DDX28-201ENST00000332395 SLC35E2BP0CK96 405 aa17.61■□□□□ 0.41
DDX28-201ENST00000332395 ALOX15P16050 662 aaPredicted RBP17.61■□□□□ 0.41
DDX28-201ENST00000332395 PGGT1BP53609 377 aa17.61■□□□□ 0.41
DDX28-201ENST00000332395 MAXP61244 160 aa17.61■□□□□ 0.41
DDX28-201ENST00000332395 ARHGAP8P85298 464 aa17.61■□□□□ 0.41
DDX28-201ENST00000332395 SEPT6Q14141 434 aa17.61■□□□□ 0.41
DDX28-201ENST00000332395 MARC1Q5VT66 337 aa17.61■□□□□ 0.41
DDX28-201ENST00000332395 FUT10Q6P4F1 479 aa17.61■□□□□ 0.41
DDX28-201ENST00000332395 RNF19BQ6ZMZ0 732 aa17.61■□□□□ 0.41
DDX28-201ENST00000332395 PABPC5Q96DU9 382 aaKnown RBP17.61■□□□□ 0.41
DDX28-201ENST00000332395 NUDCD1Q96RS6 583 aa17.61■□□□□ 0.41
DDX28-201ENST00000332395 PRKD2Q9BZL6 878 aa17.61■□□□□ 0.41
DDX28-201ENST00000332395 DNAJC28Q9NX36 388 aa17.61■□□□□ 0.41
DDX28-201ENST00000332395 NKX1-2Q9UD57 310 aaPredicted RBP17.61■□□□□ 0.41
DDX28-201ENST00000332395 MID2Q9UJV3 735 aa17.61■□□□□ 0.41
DDX28-201ENST00000332395 SLC12A8A0AV02 714 aa17.6■□□□□ 0.41
DDX28-201ENST00000332395 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.6■□□□□ 0.41
DDX28-201ENST00000332395 TK2O00142 265 aa17.6■□□□□ 0.41
DDX28-201ENST00000332395 ZNF195O14628 629 aa17.6■□□□□ 0.41
DDX28-201ENST00000332395 SIN3BO75182 1162 aa17.6■□□□□ 0.41
DDX28-201ENST00000332395 APOA4P06727 396 aa17.6■□□□□ 0.41
DDX28-201ENST00000332395 CALRP27797 417 aaKnown RBP17.6■□□□□ 0.41
DDX28-201ENST00000332395 GCKP35557 465 aa17.6■□□□□ 0.41
DDX28-201ENST00000332395 AVPR1AP37288 418 aa17.6■□□□□ 0.41
DDX28-201ENST00000332395 SLC1A2P43004 574 aa17.6■□□□□ 0.41
DDX28-201ENST00000332395 IDH3AP50213 366 aa17.6■□□□□ 0.41
DDX28-201ENST00000332395 KDSRQ06136 332 aa17.6■□□□□ 0.41
DDX28-201ENST00000332395 ITKQ08881 620 aa17.6■□□□□ 0.41
DDX28-201ENST00000332395 SLC12A1Q13621 1099 aa17.6■□□□□ 0.41
DDX28-201ENST00000332395 THOC5Q13769 683 aaKnown RBP17.6■□□□□ 0.41
DDX28-201ENST00000332395 RTP2Q5QGT7 225 aa17.6■□□□□ 0.41
DDX28-201ENST00000332395 RABGAP1LQ5R372 815 aa17.6■□□□□ 0.41
DDX28-201ENST00000332395 KIAA0930Q6ICG6 404 aaPredicted RBP17.6■□□□□ 0.41
DDX28-201ENST00000332395 ZNF354CQ86Y25 554 aa17.6■□□□□ 0.41
DDX28-201ENST00000332395 SLC41A1Q8IVJ1 513 aa17.6■□□□□ 0.41
DDX28-201ENST00000332395 SLC25A41Q8N5S1 370 aa17.6■□□□□ 0.41
DDX28-201ENST00000332395 TTC8Q8TAM2 541 aa17.6■□□□□ 0.41
DDX28-201ENST00000332395 PSMG2Q969U7 264 aa17.6■□□□□ 0.41
DDX28-201ENST00000332395 SPATA17Q96L03 361 aa17.6■□□□□ 0.41
DDX28-201ENST00000332395 TSNARE1Q96NA8 513 aa17.6■□□□□ 0.41
DDX28-201ENST00000332395 OXCT2Q9BYC2 517 aaPredicted RBP17.6■□□□□ 0.41
DDX28-201ENST00000332395 ACE2Q9BYF1 805 aaPredicted RBP17.6■□□□□ 0.41
DDX28-201ENST00000332395 UBE2OQ9C0C9 1292 aaKnown RBP17.6■□□□□ 0.41
DDX28-201ENST00000332395 MMADHCQ9H3L0 296 aaPredicted RBP17.6■□□□□ 0.41
DDX28-201ENST00000332395 ARNT2Q9HBZ2 717 aa17.6■□□□□ 0.41
DDX28-201ENST00000332395 PHF24Q9UPV7 400 aa17.6■□□□□ 0.41
DDX28-201ENST00000332395 TMEM114B3SHH9 223 aa17.6■□□□□ 0.41
DDX28-201ENST00000332395 HSPA4LO95757 839 aa17.6■□□□□ 0.41
DDX28-201ENST00000332395 IGLV3-27P01718 113 aa17.6■□□□□ 0.41
DDX28-201ENST00000332395 CD86P42081 329 aa17.6■□□□□ 0.41
DDX28-201ENST00000332395 BFSP2Q13515 415 aa17.6■□□□□ 0.41
DDX28-201ENST00000332395 C11orf91Q3C1V1 193 aa17.6■□□□□ 0.41
DDX28-201ENST00000332395 ZNF470Q6ECI4 717 aa17.6■□□□□ 0.41
DDX28-201ENST00000332395 LCA5Q86VQ0 697 aa17.6■□□□□ 0.41
DDX28-201ENST00000332395 TMPRSS6Q8IU80 811 aa17.6■□□□□ 0.41
DDX28-201ENST00000332395 REM2Q8IYK8 340 aaPredicted RBP17.6■□□□□ 0.41
DDX28-201ENST00000332395 RDH11Q8TC12 318 aa17.6■□□□□ 0.41
DDX28-201ENST00000332395 SH3TC2Q8TF17 1288 aa17.6■□□□□ 0.41
DDX28-201ENST00000332395 CFHR5Q9BXR6 569 aa17.6■□□□□ 0.41
DDX28-201ENST00000332395 ATP13A1Q9HD20 1204 aa17.6■□□□□ 0.41
DDX28-201ENST00000332395 CREBZFQ9NS37 354 aa17.6■□□□□ 0.41
DDX28-201ENST00000332395 OXSMQ9NWU1 459 aa17.6■□□□□ 0.41
DDX28-201ENST00000332395 ZNF212Q9UDV6 495 aa17.6■□□□□ 0.41
DDX28-201ENST00000332395 LRFN2Q9ULH4 789 aa17.6■□□□□ 0.41
DDX28-201ENST00000332395 CORO1CQ9ULV4 474 aaPredicted RBP17.6■□□□□ 0.41
DDX28-201ENST00000332395 GREB1Q4ZG55 1949 aa17.6■□□□□ 0.41
DDX28-201ENST00000332395 MIA3Q5JRA6 1907 aa17.6■□□□□ 0.41
DDX28-201ENST00000332395 FAM95CA0A1B0GW59 222 aa17.59■□□□□ 0.41
DDX28-201ENST00000332395 NT5C1B-RDH14C9J2C7 533 aa17.59■□□□□ 0.41
DDX28-201ENST00000332395 SPECC1L-ADORA2AF8WAN1 911 aa17.59■□□□□ 0.41
DDX28-201ENST00000332395 TBC1D4O60343 1298 aa17.59■□□□□ 0.41
DDX28-201ENST00000332395 H2AFYO75367 372 aaKnown RBP17.59■□□□□ 0.41
DDX28-201ENST00000332395 AOC1P19801 751 aa17.59■□□□□ 0.41
DDX28-201ENST00000332395 PBX3P40426 434 aa17.59■□□□□ 0.41
DDX28-201ENST00000332395 POLD2P49005 469 aa17.59■□□□□ 0.41
DDX28-201ENST00000332395 CAPRIN2Q6IMN6 1127 aaKnown RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms