RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 HS6ST3Q8IZP7 471 aa17.17■□□□□ 0.34
DDX41-201ENST00000330503 SEMA3CQ99985 751 aa17.17■□□□□ 0.34
DDX41-201ENST00000330503 SPON2Q9BUD6 331 aa17.17■□□□□ 0.34
DDX41-201ENST00000330503 LRRC3Q9BY71 257 aa17.17■□□□□ 0.34
DDX41-201ENST00000330503 TREX1Q9NSU2 369 aa17.17■□□□□ 0.34
DDX41-201ENST00000330503 EMCNQ9ULC0 261 aa17.17■□□□□ 0.34
DDX41-201ENST00000330503 PLXNA4Q9HCM2 1894 aa17.17■□□□□ 0.34
DDX41-201ENST00000330503 LOC285095A0A1B0GVY8 99 aa17.17■□□□□ 0.34
DDX41-201ENST00000330503 ILVBLA1L0T0 632 aa17.17■□□□□ 0.34
DDX41-201ENST00000330503 OLFM2O95897 454 aa17.17■□□□□ 0.34
DDX41-201ENST00000330503 CA8P35219 290 aa17.17■□□□□ 0.34
DDX41-201ENST00000330503 GMPRP36959 345 aa17.17■□□□□ 0.34
DDX41-201ENST00000330503 SMAD3P84022 425 aaKnown RBP17.17■□□□□ 0.34
DDX41-201ENST00000330503 PPIGQ13427 754 aaKnown RBP eCLIP17.17■□□□□ 0.347e-8■■■■□ 21.4
DDX41-201ENST00000330503 STXBP5Q5T5C0 1151 aa17.17■□□□□ 0.34
DDX41-201ENST00000330503 GAREM2Q75VX8 874 aa17.17■□□□□ 0.34
DDX41-201ENST00000330503 CCDC63Q8NA47 563 aa17.17■□□□□ 0.34
DDX41-201ENST00000330503 ACVR1CQ8NER5 493 aa17.17■□□□□ 0.34
DDX41-201ENST00000330503 KDM4CQ9H3R0 1056 aa17.17■□□□□ 0.34
DDX41-201ENST00000330503 STK39Q9UEW8 545 aa17.17■□□□□ 0.34
DDX41-201ENST00000330503 TBC1D30Q9Y2I9 924 aa17.17■□□□□ 0.34
DDX41-201ENST00000330503 ASB3Q9Y575 518 aa17.17■□□□□ 0.34
DDX41-201ENST00000330503 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.16■□□□□ 0.34
DDX41-201ENST00000330503 NRG2O14511 850 aaPredicted RBP17.16■□□□□ 0.34
DDX41-201ENST00000330503 SCAMP3O14828 347 aaKnown RBP17.16■□□□□ 0.34
DDX41-201ENST00000330503 VAPBO95292 243 aa17.16■□□□□ 0.34
DDX41-201ENST00000330503 GSRP00390 522 aa17.16■□□□□ 0.34
DDX41-201ENST00000330503 PRKCGP05129 697 aa17.16■□□□□ 0.34
DDX41-201ENST00000330503 ATXN1LP0C7T5 689 aaKnown RBP17.16■□□□□ 0.34
DDX41-201ENST00000330503 GABRB3P28472 473 aa17.16■□□□□ 0.34
DDX41-201ENST00000330503 SERPINH1P50454 418 aaKnown RBP17.16■□□□□ 0.34
DDX41-201ENST00000330503 CSE1LP55060 971 aaKnown RBP17.16■□□□□ 0.34
DDX41-201ENST00000330503 ZNF177Q13360 481 aaPredicted RBP17.16■□□□□ 0.34
DDX41-201ENST00000330503 CNGA3Q16281 694 aa17.16■□□□□ 0.34
DDX41-201ENST00000330503 PABPC1LQ4VXU2 614 aaKnown RBP17.16■□□□□ 0.34
DDX41-201ENST00000330503 SIRPB2Q5JXA9 342 aa17.16■□□□□ 0.34
DDX41-201ENST00000330503 TMEM240Q5SV17 173 aa17.16■□□□□ 0.34
DDX41-201ENST00000330503 IL31Q6EBC2 164 aa17.16■□□□□ 0.34
DDX41-201ENST00000330503 C16orf46Q6P387 395 aa17.16■□□□□ 0.34
DDX41-201ENST00000330503 THOC1Q96FV9 657 aaKnown RBP17.16■□□□□ 0.34
DDX41-201ENST00000330503 ATXN7L3BQ96GX2 97 aa17.16■□□□□ 0.34
DDX41-201ENST00000330503 NSMCE3Q96MG7 304 aa17.16■□□□□ 0.34
DDX41-201ENST00000330503 ZBED2Q9BTP6 218 aa17.16■□□□□ 0.34
DDX41-201ENST00000330503 MECRQ9BV79 373 aa17.16■□□□□ 0.34
DDX41-201ENST00000330503 ACE2Q9BYF1 805 aaPredicted RBP17.16■□□□□ 0.34
DDX41-201ENST00000330503 ABCF3Q9NUQ8 709 aa17.16■□□□□ 0.34
DDX41-201ENST00000330503 SSX2IPQ9Y2D8 614 aa17.16■□□□□ 0.34
DDX41-201ENST00000330503 INSL6Q9Y581 213 aa17.16■□□□□ 0.34
DDX41-201ENST00000330503 OBSL1O75147 1896 aa17.16■□□□□ 0.34
DDX41-201ENST00000330503 MYO1CO00159 1063 aa17.15■□□□□ 0.34
DDX41-201ENST00000330503 GFRA2O00451 464 aa17.15■□□□□ 0.34
DDX41-201ENST00000330503 HDCP19113 662 aa17.15■□□□□ 0.34
DDX41-201ENST00000330503 ERVFC1P60507 584 aa17.15■□□□□ 0.34
DDX41-201ENST00000330503 LACTB2Q53H82 288 aaPredicted RBP17.15■□□□□ 0.34
DDX41-201ENST00000330503 CES4AQ5XG92 561 aa17.15■□□□□ 0.34
DDX41-201ENST00000330503 ALG1LQ6GMV1 187 aa17.15■□□□□ 0.34
DDX41-201ENST00000330503 CXorf57Q6NSI4 855 aaKnown RBP17.15■□□□□ 0.34
DDX41-201ENST00000330503 TRPM8Q7Z2W7 1104 aa17.15■□□□□ 0.34
DDX41-201ENST00000330503 CMC1Q7Z7K0 106 aa17.15■□□□□ 0.34
DDX41-201ENST00000330503 TMC8Q8IU68 726 aa17.15■□□□□ 0.34
DDX41-201ENST00000330503 HERC6Q8IVU3 1022 aa17.15■□□□□ 0.34
DDX41-201ENST00000330503 CNTN4Q8IWV2 1026 aa17.15■□□□□ 0.34
DDX41-201ENST00000330503 CNPY4Q8N129 248 aa17.15■□□□□ 0.34
DDX41-201ENST00000330503 RANBP9Q96S59 729 aa17.15■□□□□ 0.34
DDX41-201ENST00000330503 POLR1EQ9GZS1 481 aaKnown RBP17.15■□□□□ 0.34
DDX41-201ENST00000330503 SNX15Q9NRS6 342 aa17.15■□□□□ 0.34
DDX41-201ENST00000330503 MIA3Q5JRA6 1907 aa17.15■□□□□ 0.34
DDX41-201ENST00000330503 A0A1B0GVM2 712 aa17.15■□□□□ 0.34
DDX41-201ENST00000330503 TCAF2A6NFQ2 919 aa17.15■□□□□ 0.34
DDX41-201ENST00000330503 AHSGP02765 367 aa17.15■□□□□ 0.34
DDX41-201ENST00000330503 RHOCP08134 193 aa17.15■□□□□ 0.34
DDX41-201ENST00000330503 EN2P19622 333 aaPredicted RBP17.15■□□□□ 0.34
DDX41-201ENST00000330503 GABRR2P28476 465 aa17.15■□□□□ 0.34
DDX41-201ENST00000330503 TYK2P29597 1187 aa17.15■□□□□ 0.34
DDX41-201ENST00000330503 OXCT1P55809 520 aa17.15■□□□□ 0.34
DDX41-201ENST00000330503 SEPT6Q14141 434 aa17.15■□□□□ 0.34
DDX41-201ENST00000330503 ZNF235Q14590 738 aa17.15■□□□□ 0.34
DDX41-201ENST00000330503 Q6ZNB5 142 aa17.15■□□□□ 0.34
DDX41-201ENST00000330503 TMC7Q7Z402 723 aa17.15■□□□□ 0.34
DDX41-201ENST00000330503 SETD3Q86TU7 594 aaPredicted RBP17.15■□□□□ 0.34
DDX41-201ENST00000330503 RMDN2Q96LZ7 410 aa17.15■□□□□ 0.34
DDX41-201ENST00000330503 DDX50Q9BQ39 737 aaKnown RBP17.15■□□□□ 0.34
DDX41-201ENST00000330503 SIRPGQ9P1W8 387 aa17.15■□□□□ 0.34
DDX41-201ENST00000330503 DCDC2Q9UHG0 476 aa17.15■□□□□ 0.34
DDX41-201ENST00000330503 CPQQ9Y646 472 aa17.15■□□□□ 0.34
DDX41-201ENST00000330503 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.14■□□□□ 0.33
DDX41-201ENST00000330503 LCHNA4D1U4 455 aa17.14■□□□□ 0.33
DDX41-201ENST00000330503 SIN3BO75182 1162 aa17.14■□□□□ 0.33
DDX41-201ENST00000330503 LATS1O95835 1130 aa17.14■□□□□ 0.33
DDX41-201ENST00000330503 BPGMP07738 259 aa17.14■□□□□ 0.33
DDX41-201ENST00000330503 CYP4F8P98187 520 aa17.14■□□□□ 0.33
DDX41-201ENST00000330503 FPGSQ05932 587 aa17.14■□□□□ 0.33
DDX41-201ENST00000330503 CYTH1Q15438 398 aa17.14■□□□□ 0.33
DDX41-201ENST00000330503 N4BP2L1Q5TBK1 243 aaPredicted RBP17.14■□□□□ 0.33
DDX41-201ENST00000330503 RNF219Q5W0B1 726 aaPredicted RBP17.14■□□□□ 0.33
DDX41-201ENST00000330503 RNF43Q68DV7 783 aa17.14■□□□□ 0.33
DDX41-201ENST00000330503 KYAT3Q6YP21 454 aaKnown RBP17.14■□□□□ 0.33
DDX41-201ENST00000330503 CAB39LQ9H9S4 337 aa17.14■□□□□ 0.33
DDX41-201ENST00000330503 GGT7Q9UJ14 662 aa17.14■□□□□ 0.33
DDX41-201ENST00000330503 KLF11O14901 512 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms