RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 HDAC11Q96DB2 347 aa8.49□□□□□ -1.05
SKA2-201ENST00000330137 HOPXQ9BPY8 73 aaPredicted RBP8.49□□□□□ -1.05
SKA2-201ENST00000330137 CLSTN3Q9BQT9 956 aa8.49□□□□□ -1.05
SKA2-201ENST00000330137 ZNF577Q9BSK1 485 aa8.49□□□□□ -1.05
SKA2-201ENST00000330137 SLC25A23Q9BV35 468 aa8.49□□□□□ -1.05
SKA2-201ENST00000330137 KIFC3Q9BVG8 833 aa8.49□□□□□ -1.05
SKA2-201ENST00000330137 SLA2Q9H6Q3 261 aa8.49□□□□□ -1.05
SKA2-201ENST00000330137 ANKEF1Q9NU02 776 aa8.49□□□□□ -1.05
SKA2-201ENST00000330137 PAK1IP1Q9NWT1 392 aaPredicted RBP8.49□□□□□ -1.05
SKA2-201ENST00000330137 RBAKQ9NYW8 714 aaPredicted RBP8.49□□□□□ -1.05
SKA2-201ENST00000330137 BCS1LQ9Y276 419 aa8.49□□□□□ -1.05
SKA2-201ENST00000330137 GOLGA8IPA6NC78 632 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 GOLGA8JA6NMD2 632 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 TCP10L2B9ZVM9 353 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 PSMD11O00231 422 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 ZBTB39O15060 712 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 GRID2O43424 1007 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 BCAS1O75363 584 aaPredicted RBP8.48□□□□□ -1.05
SKA2-201ENST00000330137 IL18RAPO95256 599 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 GNAO1P09471 354 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 HSD17B1P14061 328 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 IL1R1P14778 569 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 CKMT2P17540 419 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 NELFEP18615 380 aaKnown RBP8.48□□□□□ -1.05
SKA2-201ENST00000330137 PGAM1P18669 254 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 TFEBP19484 476 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 PSMA4P25789 261 aaKnown RBP8.48□□□□□ -1.05
SKA2-201ENST00000330137 GRIA3P42263 894 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 NAMPTP43490 491 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 RAD23AP54725 363 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 MMRN1Q13201 1228 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 SEMA5AQ13591 1074 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 HIST2H2ACQ16777 129 aaPredicted RBP8.48□□□□□ -1.05
SKA2-201ENST00000330137 BOLA3Q53S33 107 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 C2CD6Q53TS8 623 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 TRMT10BQ6PF06 316 aaKnown RBP8.48□□□□□ -1.05
SKA2-201ENST00000330137 ZNF534Q76KX8 674 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 C4orf19Q8IY42 314 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 ASCC1Q8N9N2 400 aaKnown RBP8.48□□□□□ -1.05
SKA2-201ENST00000330137 ZSWIM2Q8NEG5 633 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 NLGN2Q8NFZ4 835 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 OR6Q1Q8NGQ2 317 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 POMGNT1Q8WZA1 660 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 GPR101Q96P66 508 aaPredicted RBP8.48□□□□□ -1.05
SKA2-201ENST00000330137 UIMC1Q96RL1 719 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 LRRC4Q9HBW1 653 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 TBC1D13Q9NVG8 400 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 FKBP14Q9NWM8 211 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 CACNA2D2Q9NY47 1150 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 TBC1D14Q9P2M4 693 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 SAE1Q9UBE0 346 aaPredicted RBP8.48□□□□□ -1.05
SKA2-201ENST00000330137 ITM2BQ9Y287 266 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 RBMX2Q9Y388 322 aaKnown RBP8.48□□□□□ -1.05
SKA2-201ENST00000330137 A3GALT2U3KPV4 340 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 TAF1P21675 1872 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 RNF103-CHMP3A0A140T963 221 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 FAM25AB3EWG3 89 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 FAM25CB3EWG5 89 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 FAM25GB3EWG6 89 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 E7ENX8 843 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 SNPHO15079 494 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 TIMM44O43615 452 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 GABARAPO95166 117 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 TRUB2O95900 331 aaKnown RBP8.48□□□□□ -1.05
SKA2-201ENST00000330137 MYCP01106 439 aaPredicted RBP8.48□□□□□ -1.05
SKA2-201ENST00000330137 SHMT1P34896 483 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 SPRP35270 261 aaPredicted RBP8.48□□□□□ -1.05
SKA2-201ENST00000330137 MLLT10P55197 1068 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 DMP1Q13316 513 aaPredicted RBP8.48□□□□□ -1.05
SKA2-201ENST00000330137 NEDD8Q15843 81 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 PSMD5Q16401 504 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 SLFN13Q68D06 897 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 CRTC3Q6UUV7 619 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 ZYG11AQ6WRX3 759 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 EPHX4Q8IUS5 362 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 CPNE9Q8IYJ1 553 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 SCML4Q8N228 414 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 ESX1Q8N693 406 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 TRPV3Q8NET8 790 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 CYP2W1Q8TAV3 490 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 MUL1Q969V5 352 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.48□□□□□ -1.052e-9■■■■■ 43.2
SKA2-201ENST00000330137 MARVELD3Q96A59 401 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 MYRFLQ96LU7 910 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 RHOBTB2Q9BYZ6 727 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 CLPBQ9H078 707 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 DEFB129Q9H1M3 183 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 SNX25Q9H3E2 840 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 FANCEQ9HB96 536 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 GPRC5CQ9NQ84 441 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 HPS4Q9NQG7 708 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 ASNSD1Q9NWL6 643 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 TXNDC16Q9P2K2 825 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 NAALAD2Q9Y3Q0 740 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 COPG1Q9Y678 874 aaKnown RBP8.48□□□□□ -1.05
SKA2-201ENST00000330137 STYXL1Q9Y6J8 313 aa8.48□□□□□ -1.05
SKA2-201ENST00000330137 GOLGB1Q14789 3259 aaKnown RBP8.48□□□□□ -1.05
SKA2-201ENST00000330137 MAGEB16A2A368 324 aa8.47□□□□□ -1.05
SKA2-201ENST00000330137 TTC24A2A3L6 582 aaPredicted RBP8.47□□□□□ -1.05
SKA2-201ENST00000330137 H7C0C1 242 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms