RNA–Protein interactions for RNA: ENST00000321110.1

RTL3-201, Transcript of retrotransposon Gag like 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RTL3, Length 2,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3-201ENST00000321110 EEF1B2P24534 225 aaKnown RBP8.04□□□□□ -1.12
RTL3-201ENST00000321110 ACADSBP45954 432 aa8.04□□□□□ -1.12
RTL3-201ENST00000321110 SOX10P56693 466 aa8.04□□□□□ -1.12
RTL3-201ENST00000321110 CLDN10P78369 228 aa8.04□□□□□ -1.12
RTL3-201ENST00000321110 PDK2Q15119 407 aa8.04□□□□□ -1.12
RTL3-201ENST00000321110 ARL13AQ5H913 290 aaPredicted RBP8.04□□□□□ -1.12
RTL3-201ENST00000321110 TBCELQ5QJ74 424 aa8.04□□□□□ -1.12
RTL3-201ENST00000321110 MFSD14BQ5SR56 506 aa8.04□□□□□ -1.12
RTL3-201ENST00000321110 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.04□□□□□ -1.12
RTL3-201ENST00000321110 CRTC3Q6UUV7 619 aa8.04□□□□□ -1.12
RTL3-201ENST00000321110 TMC5Q6UXY8 1006 aa8.04□□□□□ -1.12
RTL3-201ENST00000321110 USP51Q70EK9 711 aa8.04□□□□□ -1.12
RTL3-201ENST00000321110 CYS1Q717R9 158 aa8.04□□□□□ -1.12
RTL3-201ENST00000321110 SPRED1Q7Z699 444 aa8.04□□□□□ -1.12
RTL3-201ENST00000321110 RALGPS2Q86X27 583 aaPredicted RBP8.04□□□□□ -1.12
RTL3-201ENST00000321110 DHFR2Q86XF0 187 aa8.04□□□□□ -1.12
RTL3-201ENST00000321110 ARMC8Q8IUR7 673 aa8.04□□□□□ -1.12
RTL3-201ENST00000321110 CMTR2Q8IYT2 770 aaKnown RBP8.04□□□□□ -1.12
RTL3-201ENST00000321110 ANKRD13AQ8IZ07 590 aa8.04□□□□□ -1.12
RTL3-201ENST00000321110 DHRSXQ8N5I4 330 aa8.04□□□□□ -1.12
RTL3-201ENST00000321110 NAT16Q8N8M0 369 aa8.04□□□□□ -1.12
RTL3-201ENST00000321110 TMEM35BQ8NCS4 154 aa8.04□□□□□ -1.12
RTL3-201ENST00000321110 PNPT1Q8TCS8 783 aaKnown RBP8.04□□□□□ -1.12
RTL3-201ENST00000321110 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.04□□□□□ -1.12
RTL3-201ENST00000321110 HTRA1Q92743 480 aa8.04□□□□□ -1.12
RTL3-201ENST00000321110 HDAC11Q96DB2 347 aa8.04□□□□□ -1.12
RTL3-201ENST00000321110 VMP1Q96GC9 406 aa8.04□□□□□ -1.12
RTL3-201ENST00000321110 CDK5RAP1Q96SZ6 601 aaKnown RBP8.04□□□□□ -1.12
RTL3-201ENST00000321110 SLC39A3Q9BRY0 314 aa8.04□□□□□ -1.12
RTL3-201ENST00000321110 FUNDC2Q9BWH2 189 aa8.04□□□□□ -1.12
RTL3-201ENST00000321110 RETREG1Q9H6L5 497 aa8.04□□□□□ -1.12
RTL3-201ENST00000321110 RSAD1Q9HA92 442 aa8.04□□□□□ -1.12
RTL3-201ENST00000321110 CCM2LQ9NUG4 571 aaPredicted RBP8.04□□□□□ -1.12
RTL3-201ENST00000321110 PIH1D1Q9NWS0 290 aaKnown RBP8.04□□□□□ -1.12
RTL3-201ENST00000321110 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.04□□□□□ -1.12
RTL3-201ENST00000321110 PKD2L2Q9NZM6 624 aa8.04□□□□□ -1.12
RTL3-201ENST00000321110 RABL2AQ9UBK7 228 aaPredicted RBP8.04□□□□□ -1.12
RTL3-201ENST00000321110 MOSPD1Q9UJG1 213 aa8.04□□□□□ -1.12
RTL3-201ENST00000321110 ZNF229Q9UJW7 825 aa8.04□□□□□ -1.12
RTL3-201ENST00000321110 SARDHQ9UL12 918 aa8.04□□□□□ -1.12
RTL3-201ENST00000321110 VWA7Q9Y334 891 aa8.04□□□□□ -1.12
RTL3-201ENST00000321110 ZNF541Q9H0D2 1346 aa8.04□□□□□ -1.12
RTL3-201ENST00000321110 TMEM233B4DJY2 109 aa8.04□□□□□ -1.12
RTL3-201ENST00000321110 M0QX08 132 aa8.04□□□□□ -1.12
RTL3-201ENST00000321110 ENDOD1O94919 500 aa8.04□□□□□ -1.12
RTL3-201ENST00000321110 KCNK2O95069 426 aa8.04□□□□□ -1.12
RTL3-201ENST00000321110 RASAL1O95294 804 aa8.04□□□□□ -1.12
RTL3-201ENST00000321110 SNAP29O95721 258 aa8.04□□□□□ -1.12
RTL3-201ENST00000321110 LSM8O95777 96 aaKnown RBP8.04□□□□□ -1.12
RTL3-201ENST00000321110 TRUB2O95900 331 aaKnown RBP8.04□□□□□ -1.12
RTL3-201ENST00000321110 CDH1P12830 882 aa8.04□□□□□ -1.12
RTL3-201ENST00000321110 GARTP22102 1010 aa8.04□□□□□ -1.12
RTL3-201ENST00000321110 HTR1BP28222 390 aa8.04□□□□□ -1.12
RTL3-201ENST00000321110 SERPINB1P30740 379 aa8.04□□□□□ -1.12
RTL3-201ENST00000321110 CDH6P55285 790 aa8.04□□□□□ -1.12
RTL3-201ENST00000321110 MPP1Q00013 466 aa8.04□□□□□ -1.12
RTL3-201ENST00000321110 UGCGQ16739 394 aa8.04□□□□□ -1.12
RTL3-201ENST00000321110 PTPN20Q4JDL3 420 aa8.04□□□□□ -1.12
RTL3-201ENST00000321110 ZBTB41Q5SVQ8 909 aa8.04□□□□□ -1.12
RTL3-201ENST00000321110 IRAK1BP1Q5VVH5 260 aa8.04□□□□□ -1.12
RTL3-201ENST00000321110 REP15Q6BDI9 236 aa8.04□□□□□ -1.12
RTL3-201ENST00000321110 LAYNQ6UX15 382 aa8.04□□□□□ -1.12
RTL3-201ENST00000321110 CCDC81Q6ZN84 652 aa8.04□□□□□ -1.12
RTL3-201ENST00000321110 TFAP2DQ7Z6R9 452 aa8.04□□□□□ -1.12
RTL3-201ENST00000321110 SLCO6A1Q86UG4 719 aa8.04□□□□□ -1.12
RTL3-201ENST00000321110 ZCCHC7Q8N3Z6 543 aaKnown RBP8.04□□□□□ -1.12
RTL3-201ENST00000321110 DCLK2Q8N568 766 aa8.04□□□□□ -1.12
RTL3-201ENST00000321110 PLD5Q8N7P1 536 aa8.04□□□□□ -1.12
RTL3-201ENST00000321110 TFAP2BQ92481 460 aa8.04□□□□□ -1.12
RTL3-201ENST00000321110 ATXN7L3BQ96GX2 97 aa8.04□□□□□ -1.12
RTL3-201ENST00000321110 SPAG4Q9NPE6 437 aa8.04□□□□□ -1.12
RTL3-201ENST00000321110 MRPL40Q9NQ50 206 aaKnown RBP8.04□□□□□ -1.12
RTL3-201ENST00000321110 GOLGA8CPA6NN73 597 aa8.03□□□□□ -1.12
RTL3-201ENST00000321110 F5H423 210 aaPredicted RBP8.03□□□□□ -1.12
RTL3-201ENST00000321110 HNRNPDLO14979 420 aaKnown RBP8.03□□□□□ -1.12
RTL3-201ENST00000321110 TEX28O15482 410 aa8.03□□□□□ -1.12
RTL3-201ENST00000321110 ASNA1O43681 348 aa8.03□□□□□ -1.12
RTL3-201ENST00000321110 CCND2P30279 289 aa8.03□□□□□ -1.12
RTL3-201ENST00000321110 AXLP30530 894 aa8.03□□□□□ -1.12
RTL3-201ENST00000321110 YWHABP31946 246 aaKnown RBP8.03□□□□□ -1.12
RTL3-201ENST00000321110 CASP3P42574 277 aa8.03□□□□□ -1.12
RTL3-201ENST00000321110 MAGEA12P43365 314 aa8.03□□□□□ -1.12
RTL3-201ENST00000321110 IST1P53990 364 aa8.03□□□□□ -1.12
RTL3-201ENST00000321110 ECT2LQ008S8 904 aa8.03□□□□□ -1.12
RTL3-201ENST00000321110 CDC20Q12834 499 aa8.03□□□□□ -1.12
RTL3-201ENST00000321110 ACAP2Q15057 778 aa8.03□□□□□ -1.12
RTL3-201ENST00000321110 CTF1Q16619 201 aa8.03□□□□□ -1.12
RTL3-201ENST00000321110 PUS10Q3MIT2 529 aaKnown RBP8.03□□□□□ -1.12
RTL3-201ENST00000321110 PAGE2BQ5JRK9 111 aa8.03□□□□□ -1.12
RTL3-201ENST00000321110 SH3PXD2AQ5TCZ1 1133 aa8.03□□□□□ -1.12
RTL3-201ENST00000321110 BROXQ5VW32 411 aa8.03□□□□□ -1.12
RTL3-201ENST00000321110 SLX4IPQ5VYV7 408 aa8.03□□□□□ -1.12
RTL3-201ENST00000321110 PMF1Q6P1K2 205 aa8.03□□□□□ -1.12
RTL3-201ENST00000321110 CASC4Q6P4E1 433 aa8.03□□□□□ -1.12
RTL3-201ENST00000321110 CYP4V2Q6ZWL3 525 aaPredicted RBP8.03□□□□□ -1.12
RTL3-201ENST00000321110 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.03□□□□□ -1.12
RTL3-201ENST00000321110 GOLM1Q8NBJ4 401 aa8.03□□□□□ -1.12
RTL3-201ENST00000321110 SLC7A14Q8TBB6 771 aa8.03□□□□□ -1.12
RTL3-201ENST00000321110 S100ZQ8WXG8 99 aa8.03□□□□□ -1.12
RTL3-201ENST00000321110 PGLYRP2Q96PD5 576 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms