RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 PAEPP09466 180 aa12.05□□□□□ -0.48
SMIM4-201ENST00000307106 ITGB7P26010 798 aa12.05□□□□□ -0.48
SMIM4-201ENST00000307106 L1CAMP32004 1257 aa12.05□□□□□ -0.48
SMIM4-201ENST00000307106 RECQLP46063 649 aaPredicted RBP12.05□□□□□ -0.48
SMIM4-201ENST00000307106 CD97P48960 835 aa12.05□□□□□ -0.48
SMIM4-201ENST00000307106 ATP1A2P50993 1020 aa12.05□□□□□ -0.48
SMIM4-201ENST00000307106 PITX1P78337 314 aaPredicted RBP12.05□□□□□ -0.48
SMIM4-201ENST00000307106 PPARDQ03181 441 aa12.05□□□□□ -0.48
SMIM4-201ENST00000307106 C22orf39Q6P5X5 142 aa12.05□□□□□ -0.48
SMIM4-201ENST00000307106 TMEM270Q6UE05 265 aa12.05□□□□□ -0.48
SMIM4-201ENST00000307106 DPY19L3Q6ZPD9 716 aa12.05□□□□□ -0.48
SMIM4-201ENST00000307106 BEND5Q7L4P6 421 aa12.05□□□□□ -0.48
SMIM4-201ENST00000307106 CCNJLQ8IV13 435 aa12.05□□□□□ -0.48
SMIM4-201ENST00000307106 FSTL5Q8N475 847 aaPredicted RBP12.05□□□□□ -0.48
SMIM4-201ENST00000307106 UBR7Q8N806 425 aa12.05□□□□□ -0.48
SMIM4-201ENST00000307106 SPATA20Q8TB22 786 aa12.05□□□□□ -0.48
SMIM4-201ENST00000307106 PSMB7Q99436 277 aa12.05□□□□□ -0.48
SMIM4-201ENST00000307106 ZSWIM1Q9BR11 485 aa12.05□□□□□ -0.48
SMIM4-201ENST00000307106 C2orf49Q9BVC5 232 aaPredicted RBP12.05□□□□□ -0.48
SMIM4-201ENST00000307106 TRIM62Q9BVG3 475 aa12.05□□□□□ -0.48
SMIM4-201ENST00000307106 ST7Q9NRC1 585 aa12.05□□□□□ -0.48
SMIM4-201ENST00000307106 TMPRSS4Q9NRS4 437 aa12.05□□□□□ -0.48
SMIM4-201ENST00000307106 SERTAD1Q9UHV2 236 aa12.05□□□□□ -0.48
SMIM4-201ENST00000307106 VPS51Q9UID3 782 aa12.05□□□□□ -0.48
SMIM4-201ENST00000307106 SRPK3Q9UPE1 567 aa12.05□□□□□ -0.48
SMIM4-201ENST00000307106 WASF2Q9Y6W5 498 aa12.05□□□□□ -0.48
SMIM4-201ENST00000307106 TNRC6AQ8NDV7 1962 aaKnown RBP12.05□□□□□ -0.48
SMIM4-201ENST00000307106 MTSS1O43312 755 aa12.04□□□□□ -0.48
SMIM4-201ENST00000307106 AGFG2O95081 481 aa12.04□□□□□ -0.48
SMIM4-201ENST00000307106 YEATS4O95619 227 aa12.04□□□□□ -0.48
SMIM4-201ENST00000307106 ALPIP09923 528 aa12.04□□□□□ -0.48
SMIM4-201ENST00000307106 LIFP15018 202 aa12.04□□□□□ -0.48
SMIM4-201ENST00000307106 BRD2P25440 801 aaKnown RBP12.04□□□□□ -0.48
SMIM4-201ENST00000307106 IGFALSP35858 605 aa12.04□□□□□ -0.48
SMIM4-201ENST00000307106 CLCN6P51797 869 aa12.04□□□□□ -0.48
SMIM4-201ENST00000307106 MCCD1P59942 119 aaPredicted RBP12.04□□□□□ -0.48
SMIM4-201ENST00000307106 YPEL5P62699 121 aa12.04□□□□□ -0.48
SMIM4-201ENST00000307106 EIF4EBP2Q13542 120 aaPredicted RBP12.04□□□□□ -0.48
SMIM4-201ENST00000307106 CUL4AQ13619 759 aa12.04□□□□□ -0.48
SMIM4-201ENST00000307106 AUHQ13825 339 aaKnown RBP12.04□□□□□ -0.48
SMIM4-201ENST00000307106 ELOCQ15369 112 aa12.04□□□□□ -0.48
SMIM4-201ENST00000307106 STILQ15468 1287 aa12.04□□□□□ -0.48
SMIM4-201ENST00000307106 TCEA2Q15560 299 aa12.04□□□□□ -0.48
SMIM4-201ENST00000307106 CBWD6Q4V339 395 aa12.04□□□□□ -0.48
SMIM4-201ENST00000307106 CBWD3Q5JTY5 395 aa12.04□□□□□ -0.48
SMIM4-201ENST00000307106 CBWD5Q5RIA9 395 aa12.04□□□□□ -0.48
SMIM4-201ENST00000307106 PHF19Q5T6S3 580 aa12.04□□□□□ -0.48
SMIM4-201ENST00000307106 LVRNQ6Q4G3 990 aa12.04□□□□□ -0.48
SMIM4-201ENST00000307106 LINGO4Q6UY18 593 aa12.04□□□□□ -0.48
SMIM4-201ENST00000307106 MACC1Q6ZN28 852 aa12.04□□□□□ -0.48
SMIM4-201ENST00000307106 PARS2Q7L3T8 475 aaKnown RBP12.04□□□□□ -0.48
SMIM4-201ENST00000307106 IL22RA1Q8N6P7 574 aa12.04□□□□□ -0.48
SMIM4-201ENST00000307106 Q8N9G6 341 aaPredicted RBP12.04□□□□□ -0.48
SMIM4-201ENST00000307106 OR6C4Q8NGE1 309 aa12.04□□□□□ -0.48
SMIM4-201ENST00000307106 ASB12Q8WXK4 309 aa12.04□□□□□ -0.48
SMIM4-201ENST00000307106 NKD1Q969G9 470 aa12.04□□□□□ -0.48
SMIM4-201ENST00000307106 PAGE5Q96GU1 130 aa12.04□□□□□ -0.48
SMIM4-201ENST00000307106 CATSPER2Q96P56 530 aa12.04□□□□□ -0.48
SMIM4-201ENST00000307106 B3GNT4Q9C0J1 378 aa12.04□□□□□ -0.48
SMIM4-201ENST00000307106 POPDC2Q9HBU9 364 aa12.04□□□□□ -0.48
SMIM4-201ENST00000307106 GPR34Q9UPC5 381 aa12.04□□□□□ -0.48
SMIM4-201ENST00000307106 MAPK8IP1Q9UQF2 711 aa12.04□□□□□ -0.48
SMIM4-201ENST00000307106 TBC1D30Q9Y2I9 924 aa12.04□□□□□ -0.48
SMIM4-201ENST00000307106 RNF215Q9Y6U7 377 aa12.04□□□□□ -0.48
SMIM4-201ENST00000307106 SYNJ2BP-COX16A0A087WUM0 186 aa12.03□□□□□ -0.48
SMIM4-201ENST00000307106 NEMP1O14524 444 aa12.03□□□□□ -0.48
SMIM4-201ENST00000307106 TSPAN6O43657 245 aa12.03□□□□□ -0.48
SMIM4-201ENST00000307106 CLDN11O75508 207 aa12.03□□□□□ -0.48
SMIM4-201ENST00000307106 ENDOD1O94919 500 aa12.03□□□□□ -0.48
SMIM4-201ENST00000307106 CALCAP01258 141 aa12.03□□□□□ -0.48
SMIM4-201ENST00000307106 RHOCP08134 193 aa12.03□□□□□ -0.48
SMIM4-201ENST00000307106 SLC2A3P11169 496 aa12.03□□□□□ -0.48
SMIM4-201ENST00000307106 CTSEP14091 401 aa12.03□□□□□ -0.48
SMIM4-201ENST00000307106 TBXAS1P24557 533 aaPredicted RBP12.03□□□□□ -0.48
SMIM4-201ENST00000307106 CCR1P32246 355 aa12.03□□□□□ -0.48
SMIM4-201ENST00000307106 GGCXP38435 758 aa12.03□□□□□ -0.48
SMIM4-201ENST00000307106 EIF4A3P38919 411 aaKnown RBP12.03□□□□□ -0.48
SMIM4-201ENST00000307106 BLKP51451 505 aa12.03□□□□□ -0.48
SMIM4-201ENST00000307106 LRMPQ12912 555 aa12.03□□□□□ -0.48
SMIM4-201ENST00000307106 C8orf34Q49A92 452 aa12.03□□□□□ -0.48
SMIM4-201ENST00000307106 VPS36Q86VN1 386 aa12.03□□□□□ -0.48
SMIM4-201ENST00000307106 GPBAR1Q8TDU6 330 aa12.03□□□□□ -0.48
SMIM4-201ENST00000307106 CENPTQ96BT3 561 aa12.03□□□□□ -0.48
SMIM4-201ENST00000307106 ZNF396Q96N95 335 aaPredicted RBP12.03□□□□□ -0.48
SMIM4-201ENST00000307106 EDEM3Q9BZQ6 932 aa12.03□□□□□ -0.48
SMIM4-201ENST00000307106 FAM204AQ9H8W3 233 aa12.03□□□□□ -0.48
SMIM4-201ENST00000307106 FOXD4L1Q9NU39 408 aa12.03□□□□□ -0.48
SMIM4-201ENST00000307106 COX16Q9P0S2 106 aa12.03□□□□□ -0.48
SMIM4-201ENST00000307106 GGT7Q9UJ14 662 aa12.03□□□□□ -0.48
SMIM4-201ENST00000307106 COQ4Q9Y3A0 265 aa12.03□□□□□ -0.48
SMIM4-201ENST00000307106 PCDHB4Q9Y5E5 795 aa12.03□□□□□ -0.48
SMIM4-201ENST00000307106 SHANK1Q9Y566 2161 aa12.03□□□□□ -0.48
SMIM4-201ENST00000307106 RP1L1Q8IWN7 2480 aaPredicted RBP12.03□□□□□ -0.48
SMIM4-201ENST00000307106 ZNF891A8MT65 544 aaPredicted RBP12.02□□□□□ -0.49
SMIM4-201ENST00000307106 RNF225M0QZC1 329 aaPredicted RBP12.02□□□□□ -0.49
SMIM4-201ENST00000307106 ACTN4O43707 911 aaKnown RBP12.02□□□□□ -0.49
SMIM4-201ENST00000307106 ABL2P42684 1182 aa12.02□□□□□ -0.49
SMIM4-201ENST00000307106 RPL34P49207 117 aaKnown RBP12.02□□□□□ -0.49
SMIM4-201ENST00000307106 HK3P52790 923 aa12.02□□□□□ -0.49
SMIM4-201ENST00000307106 CDH4P55283 916 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms